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Carg17188 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17188
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin responsive SAUR protein
Genome locationCarg_Chr01:12893869..12894321
RNA-Seq ExpressionCarg17188
SyntenyCarg17188
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011652445.1 auxin-induced protein 6B [Cucumis sativus]7.9e-7692Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRATYLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRSE PNSGRFVKLDD+QSYCHIGIR  +D WPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

XP_022941181.1 auxin-induced protein 6B-like [Cucurbita moschata]6.7e-83100Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

XP_022982465.1 auxin-induced protein 6B-like [Cucurbita maxima]8.1e-8197.33Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        MTAGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEE+GFSNSGPLAIPCDESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRSEPPNSGRFVKLDDYQSYCHIGIR+RVD WPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

XP_023525874.1 auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo]1.4e-8098.67Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRSEPPNSGRFVKLDD QSY HIGIRNRVDFWPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

XP_038899268.1 auxin-induced protein 6B-like [Benincasa hispida]2.1e-7691.33Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHP+FKKLLV+AEEEYGF+N GPLAIPC+ESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRSE PNSGRFVKLDD+QSYCHIGIR  +D WPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

TrEMBL top hitse value%identityAlignment
A0A1S3CRK3 auxin-induced protein 6B5.0e-7691.33Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRATYLNHPVFKKLL++AEEEYGF+N GPLAIPCDESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRSE PNSGRFVKLDD+QSYCHIGIR  +D WPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

A0A5D3E601 Auxin-induced protein 6B5.0e-7691.33Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRATYLNHPVFKKLL++AEEEYGF+N GPLAIPCDESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRSE PNSGRFVKLDD+QSYCHIGIR  +D WPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

A0A6J1F8H9 auxin-induced protein 6B3.8e-7690.67Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRS+ PNSGRFVKLD++Q+YCHIGIR  +D WPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

A0A6J1FKE4 auxin-induced protein 6B-like3.2e-83100Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

A0A6J1J2Q9 auxin-induced protein 6B-like3.9e-8197.33Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR
        MTAGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEE+GFSNSGPLAIPCDESVFEEVIR
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIR

Query:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW
        FISRSEPPNSGRFVKLDDYQSYCHIGIR+RVD WPESRPLLHGLAEKSIW
Subjt:  FISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR408.4e-1252.31Show/hide
Query:  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVI
        + S VP+GHV V VG    RFVV A  LNHPVF  LL  + +EYG++  G L IPC+  VFE+V+
Subjt:  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVI

O65695 Auxin-responsive protein SAUR505.8e-1339.6Show/hide
Query:  KCSKIRHIVRLRQMLRRW-----RNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRF
        K SK+     L+Q+L+R      +N      + +P DVP GH  V VG +  R++V  ++L HP F+ LL  AEEE+GF +   L IPCDE VF+ +   
Subjt:  KCSKIRHIVRLRQMLRRW-----RNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRF

Query:  I
        I
Subjt:  I

P33083 Auxin-induced protein 6B2.2e-1246.91Show/hide
Query:  KARISANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSN-SGPLAIPCDESVFEEVIRFIS
        KA  SAN+  S   DV  G++AV VG   RRFV+  +YLN P F+ LL +AEEE+G+ + +G L IPC E VF+ +  F++
Subjt:  KARISANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSN-SGPLAIPCDESVFEEVIRFIS

Q9LTV3 Auxin-responsive protein SAUR725.4e-1147.89Show/hide
Query:  SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEP
        S VP GHV V VG    RFVV A  LNHPVF  LL  + +EYG+   G L IPC   VFE ++  +    P
Subjt:  SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEP

Q9SGU2 Auxin-responsive protein SAUR711.1e-1145Show/hide
Query:  MLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVI
        +LR    + R    +  S VP GHV V VG    RFVV A  LNHPVF  LL ++ +EYG+   G L IPC   VFE ++
Subjt:  MLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVI

Arabidopsis top hitse value%identityAlignment
AT1G19840.1 SAUR-like auxin-responsive protein family2.2e-5567.53Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARIS--ANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEV
        M   L KCSKIRHIVRLRQMLRRWRNKAR+S  +  +PSDVP+GHVAVCVG+ CRRFVVRA+YLNHP+   LLV+AEEE+GF+N GPL IPC+ESVFEE 
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARIS--ANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEV

Query:  IRFISRSEPPNSGRFVKLDDYQSYCH--IGIRNRVDFWPESRPLLHGLAEKSIW
        IRFISRS+   S RF   DD Q  C+  I I++++D   ESRPLLHG+AEK+IW
Subjt:  IRFISRSEPPNSGRFVKLDDYQSYCH--IGIRNRVDFWPESRPLLHGLAEKSIW

AT1G75590.1 SAUR-like auxin-responsive protein family1.1e-5969.48Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISAN---RIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEE
        M  GLGKCSKIRHIVRLRQMLRRWR++AR+S++    +PSDVP+GHVAV VG+SCRRFVVRATYLNHPV + LLV+AEEE+GF N GPL IPC+ESVFEE
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISAN---RIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEE

Query:  VIRFISRSEPPNSGRFVKLDDYQSYCH-IGIRNRVDFWPESRPLLHGLAEKSIW
         IRFISRS+   S RF   DD+Q  CH +GIR+++D W ESRPLLHG+ EK++W
Subjt:  VIRFISRSEPPNSGRFVKLDDYQSYCH-IGIRNRVDFWPESRPLLHGLAEKSIW

AT4G34750.1 SAUR-like auxin-responsive protein family6.3e-3955.56Show/hide
Query:  LGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFI
        +GK +KI  +VR+RQML++W+ KA I S+N  P SDVP GHVAV VG + RR+VVRA +LNHP+F++LL EAEEEYGF+N GPLAIPCDES+FE++I  +
Subjt:  LGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFI

Query:  SRSE-PPNSGR----FVKLDDYQSYCHIGI-RNRVDFWPESRPLLHGLAEKSI
        +R E   +SGR       L+D +   H+G+ +N V    ESRPLL G+AEKS+
Subjt:  SRSE-PPNSGR----FVKLDDYQSYCHIGI-RNRVDFWPESRPLLHGLAEKSI

AT4G34750.2 SAUR-like auxin-responsive protein family6.3e-3955.56Show/hide
Query:  LGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFI
        +GK +KI  +VR+RQML++W+ KA I S+N  P SDVP GHVAV VG + RR+VVRA +LNHP+F++LL EAEEEYGF+N GPLAIPCDES+FE++I  +
Subjt:  LGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFI

Query:  SRSE-PPNSGR----FVKLDDYQSYCHIGI-RNRVDFWPESRPLLHGLAEKSI
        +R E   +SGR       L+D +   H+G+ +N V    ESRPLL G+AEKS+
Subjt:  SRSE-PPNSGR----FVKLDDYQSYCHIGI-RNRVDFWPESRPLLHGLAEKSI

AT5G10990.1 SAUR-like auxin-responsive protein family1.7e-5266.23Show/hide
Query:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANR--IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEV
        M  G+GKCSKIRHIV+LRQMLR+WRNKAR+S+ R  +PSDVP+GHVAV VG SCRRFVV ATYLNHP+   LLV+AEEE+GF+N GPL IPC+ESVFEE 
Subjt:  MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANR--IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEV

Query:  IRFISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSI
        IRFI+R     S RF   DD +   H GIR+++D   ESRPLLHG++EK+I
Subjt:  IRFISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGCTGGACTTGGAAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTC
GGACGTACCTGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAG
CAGAAGAGGAATACGGGTTTAGCAATTCAGGTCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAGCCACCCAACTCG
GGGCGGTTCGTGAAATTGGACGATTATCAGAGTTACTGCCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAA
ATCCATCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGCTGGACTTGGAAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTC
GGACGTACCTGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAG
CAGAAGAGGAATACGGGTTTAGCAATTCAGGTCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAGCCACCCAACTCG
GGGCGGTTCGTGAAATTGGACGATTATCAGAGTTACTGCCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAA
ATCCATCTGGTAA
Protein sequenceShow/hide protein sequence
MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNS
GRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW