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Carg17193 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17193
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:12922413..12924325
RNA-Seq ExpressionCarg17193
SyntenyCarg17193
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608590.1 hypothetical protein SDJN03_01932, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2060.19Show/hide
Query:  MAQLAASCGFGYPATDPPLINCLPASWISVKWAVLSQPMAQKPSLDCSGPSSPNQISDWCKNFKRALSLSRSL--ALVSPSLSLPLLFQRSAEAFWRCRS
        MAQLAASCGFGYPATDPPLINCLPASWISVKWAVLSQPMAQKPSLDCSGP     +      F  +L LS+    AL+SP   +P +        W    
Subjt:  MAQLAASCGFGYPATDPPLINCLPASWISVKWAVLSQPMAQKPSLDCSGPSSPNQISDWCKNFKRALSLSRSL--ALVSPSLSLPLLFQRSAEAFWRCRS

Query:  LIC
        L C
Subjt:  LIC
KAG7037907.1 hypothetical protein SDJN02_01538, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-65100Show/hide
Query:  MAQLAASCGFGYPATDPPLINCLPASWISVKWAVLSQPMAQKPSLDCSGPSSPNQISDWCKNFKRALSLSRSLALVSPSLSLPLLFQRSAEAFWRCRSLI
        MAQLAASCGFGYPATDPPLINCLPASWISVKWAVLSQPMAQKPSLDCSGPSSPNQISDWCKNFKRALSLSRSLALVSPSLSLPLLFQRSAEAFWRCRSLI
Subjt:  MAQLAASCGFGYPATDPPLINCLPASWISVKWAVLSQPMAQKPSLDCSGPSSPNQISDWCKNFKRALSLSRSLALVSPSLSLPLLFQRSAEAFWRCRSLI

Query:  CLSAVDLRLSLYDSPLSTASEPAFADF
        CLSAVDLRLSLYDSPLSTASEPAFADF
Subjt:  CLSAVDLRLSLYDSPLSTASEPAFADF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAATTGGCTGCTTCCTGTGGTTTTGGATATCCTGCTACAGACCCACCACTCATCAACTGCCTGCCTGCCAGTTGGATATCTGTTAAATGGGCCGTCCTTTCTCA
GCCCATGGCCCAAAAGCCCAGTCTGGATTGTTCTGGCCCAAGTTCGCCGAACCAAATATCCGATTGGTGTAAGAATTTCAAACGCGCTCTCTCGCTTTCTCGCTCTCTCG
CTCTCGTCTCTCCATCTTTATCACTTCCTCTGCTTTTCCAACGGTCCGCCGAGGCATTTTGGCGGTGCCGATCGCTGATTTGTCTCTCCGCCGTCGATCTCCGACTCTCA
CTCTACGATTCTCCTCTATCCACTGCCTCTGAGCCAGCTTTTGCAGACTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAATTGGCTGCTTCCTGTGGTTTTGGATATCCTGCTACAGACCCACCACTCATCAACTGCCTGCCTGCCAGTTGGATATCTGTTAAATGGGCCGTCCTTTCTCA
GCCCATGGCCCAAAAGCCCAGTCTGGATTGTTCTGGCCCAAGTTCGCCGAACCAAATATCCGATTGGTGTAAGAATTTCAAACGCGCTCTCTCGCTTTCTCGCTCTCTCG
CTCTCGTCTCTCCATCTTTATCACTTCCTCTGCTTTTCCAACGGTCCGCCGAGGCATTTTGGCGGTGCCGATCGCTGATTTGTCTCTCCGCCGTCGATCTCCGACTCTCA
CTCTACGATTCTCCTCTATCCACTGCCTCTGAGCCAGCTTTTGCAGACTTTTGA
Protein sequenceShow/hide protein sequence
MAQLAASCGFGYPATDPPLINCLPASWISVKWAVLSQPMAQKPSLDCSGPSSPNQISDWCKNFKRALSLSRSLALVSPSLSLPLLFQRSAEAFWRCRSLICLSAVDLRLS
LYDSPLSTASEPAFADF