; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17197 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17197
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiongibberellin-regulated protein 1-like
Genome locationCarg_Chr01:12936615..12937447
RNA-Seq ExpressionCarg17197
SyntenyCarg17197
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608594.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia]1.7e-53100Show/hide
Query:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
Subjt:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

XP_022139249.1 gibberellin-regulated protein 11-like [Momordica charantia]1.4e-3473.58Show/hide
Query:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MA S LSK L+TCV MSLLV+  V A EKVN   G  A P  IQ+IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSGGY+ CPCYA +TT G
Subjt:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GR KCP
Subjt:  GRRKCP

XP_022940222.1 gibberellin-regulated protein 1-like [Cucurbita moschata]7.3e-5297.17Show/hide
Query:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKAL+TCVLMSLLVVHLVAADE+VNSIHGVAAHPANIQSIDCGGACASRCKLSSRP+LCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
Subjt:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

XP_022982305.1 gibberellin-regulated protein 1-like [Cucurbita maxima]4.3e-5296.23Show/hide
Query:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKAL+TCVLMSLLVVHLV ADEKVNSIHGVAAHPAN+QSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYAS+TTHG
Subjt:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

XP_023525231.1 snakin-2-like [Cucurbita pepo subsp. pepo]1.9e-5297.17Show/hide
Query:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKALLTCVLMSLLVVHLV AD+KVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYAS+TTHG
Subjt:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

TrEMBL top hitse value%identityAlignment
A0A1R3HYG7 Gibberellin regulated protein2.6e-3169.31Show/hide
Query:  LSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC
        +SKA++  +L+SLLV  LV AD+ VN     A +P   Q IDCG AC +RCKLSSRPHLC RACGTCCARCNCVPPGT+G  E CPCYASLTTHGGRRKC
Subjt:  LSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC

Query:  P
        P
Subjt:  P

A0A6A2Y6S2 Snakin-22.0e-3170.3Show/hide
Query:  LSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC
        +SKAL+  +L+SLL+V LV AD+ V S     A P     IDCGGACA+RC+LSSRPHLC RACGTCCARCNCVPPGT+G  E CPCYASLTTHGGRRKC
Subjt:  LSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC

Query:  P
        P
Subjt:  P

A0A6J1CCE1 gibberellin-regulated protein 11-like6.7e-3573.58Show/hide
Query:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MA S LSK L+TCV MSLLV+  V A EKVN   G  A P  IQ+IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSGGY+ CPCYA +TT G
Subjt:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GR KCP
Subjt:  GRRKCP

A0A6J1FJ01 gibberellin-regulated protein 1-like3.6e-5297.17Show/hide
Query:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKAL+TCVLMSLLVVHLVAADE+VNSIHGVAAHPANIQSIDCGGACASRCKLSSRP+LCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
Subjt:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

A0A6J1J2A8 gibberellin-regulated protein 1-like2.1e-5296.23Show/hide
Query:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKAL+TCVLMSLLVVHLV ADEKVNSIHGVAAHPAN+QSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYAS+TTHG
Subjt:  MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 119.4e-2658.59Show/hide
Query:  KALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        + LL  +L+SLLV+  V AD   ++         +   IDC   C  RC LSSRP+LC RACGTCCARCNCV PGTSG Y+ CPCY SLTTHGGRRKCP
Subjt:  KALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

P46687 Gibberellin-regulated protein 37.0e-2151.55Show/hide
Query:  VLMSLLVVHLVAADEKVNSIHGVAAHPA----NIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        +  S LV+ L+        +H  AA  +     +  IDCGG C  RC  SSRP+LC RAC +CC RCNCVPPGT+G +  CPCYAS+TT GGR KCP
Subjt:  VLMSLLVVHLVAADEKVNSIHGVAAHPA----NIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

P46688 Gibberellin-regulated protein 21.4e-2153.76Show/hide
Query:  VLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        +++ L++V L   +  V++  G A     +  IDCGG C  RC  SSR  LC RAC +CC+RCNCVPPGTSG    CPCYAS+TTHGGR KCP
Subjt:  VLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

P46689 Gibberellin-regulated protein 13.4e-2862.75Show/hide
Query:  LSKALLTCVLMSLLVVHLVAAD-EKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK
        +SKAL+  +L+SLLV+ LV AD E     +G A      + IDCG AC +RC+LS RP LC RACGTCC RCNCVPPGT G Y+ C CYASLTTHGGRRK
Subjt:  LSKALLTCVLMSLLVVHLVAAD-EKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK

Query:  CP
        CP
Subjt:  CP

Q93X17 Snakin-21.1e-2962.5Show/hide
Query:  LSKALLTCVLMSLLV---VHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGR
        +SKAL   +L+SLL+   V  +  D+  ++    AA+  + + IDCGGACA+RC+LSSRP LC RACGTCCARCNCVPPGTSG  ETCPCYASLTTHG +
Subjt:  LSKALLTCVLMSLLV---VHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 12.4e-2962.75Show/hide
Query:  LSKALLTCVLMSLLVVHLVAAD-EKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK
        +SKAL+  +L+SLLV+ LV AD E     +G A      + IDCG AC +RC+LS RP LC RACGTCC RCNCVPPGT G Y+ C CYASLTTHGGRRK
Subjt:  LSKALLTCVLMSLLVVHLVAAD-EKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK

Query:  CP
        CP
Subjt:  CP

AT1G75750.2 GAST1 protein homolog 19.9e-3163.37Show/hide
Query:  LSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC
        +SKAL+  +L+SLLV+ LV ADE     +G A      + IDCG AC +RC+LS RP LC RACGTCC RCNCVPPGT G Y+ C CYASLTTHGGRRKC
Subjt:  LSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC

Query:  P
        P
Subjt:  P

AT2G18420.1 Gibberellin-regulated family protein6.7e-2758.59Show/hide
Query:  KALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        + LL  +L+SLLV+  V AD   ++         +   IDC   C  RC LSSRP+LC RACGTCCARCNCV PGTSG Y+ CPCY SLTTHGGRRKCP
Subjt:  KALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

AT4G09600.1 GAST1 protein homolog 34.9e-2251.55Show/hide
Query:  VLMSLLVVHLVAADEKVNSIHGVAAHPA----NIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        +  S LV+ L+        +H  AA  +     +  IDCGG C  RC  SSRP+LC RAC +CC RCNCVPPGT+G +  CPCYAS+TT GGR KCP
Subjt:  VLMSLLVVHLVAADEKVNSIHGVAAHPA----NIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

AT4G09610.1 GAST1 protein homolog 21.0e-2253.76Show/hide
Query:  VLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        +++ L++V L   +  V++  G A     +  IDCGG C  RC  SSR  LC RAC +CC+RCNCVPPGTSG    CPCYAS+TTHGGR KCP
Subjt:  VLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCTCTGGTCTTTCCAAGGCTTTGCTCACCTGTGTTCTCATGTCCCTTCTCGTCGTTCATTTGGTTGCAGCTGATGAAAAGGTGAACTCAATTCATGGCGTTGC
GGCTCATCCTGCTAATATACAAAGCATTGATTGTGGGGGAGCTTGTGCGTCCAGGTGCAAATTATCTTCAAGGCCACACCTTTGCAAGAGGGCATGCGGGACGTGCTGTG
CGCGTTGCAACTGCGTGCCGCCGGGCACTTCCGGCGGCTACGAAACCTGCCCGTGCTACGCCAGCTTGACCACTCACGGCGGCCGGAGAAAGTGTCCCTAA
mRNA sequenceShow/hide mRNA sequence
AAACATTTTAACAATCCTCTGCTTCGTCTCCCATGGCCATCTCTGGTCTTTCCAAGGCTTTGCTCACCTGTGTTCTCATGTCCCTTCTCGTCGTTCATTTGGTTGCAGCT
GATGAAAAGGTGAACTCAATTCATGGCGTTGCGGCTCATCCTGCTAATATACAAAGCATTGATTGTGGGGGAGCTTGTGCGTCCAGGTGCAAATTATCTTCAAGGCCACA
CCTTTGCAAGAGGGCATGCGGGACGTGCTGTGCGCGTTGCAACTGCGTGCCGCCGGGCACTTCCGGCGGCTACGAAACCTGCCCGTGCTACGCCAGCTTGACCACTCACG
GCGGCCGGAGAAAGTGTCCCTAAATAAAGAATTATTCAAAGTTCTCTGCATATATTATTTGTGCATGCAACGTGTCTGCTACTTAAATCGAATCAGGGTTATGTTGGAGT
TTGATTAATGATTATGAGTTTCAAGCGTGTTTGAAATATGAAATTAATGTAAAATAAAGGGAATCTGTGAAAACCAGATTCTTGTGTCTCTGTCTCTTTTGTTTGTTTGG
CCTATTATATGAATATAAGAGGTATGAATTATTTTGTACGTTTCTTGGACTTGGAAGAAAAGTGGGTCTGTTTTT
Protein sequenceShow/hide protein sequence
MAISGLSKALLTCVLMSLLVVHLVAADEKVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPHLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP