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Carg17200 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17200
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr01:12945661..12946008
RNA-Seq ExpressionCarg17200
SyntenyCarg17200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063287.1 hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa]2.2e-4181.58Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER +ASMS PPMPLLAFLGVV+LLLSLQSQ+M  DFKL LLALPFL+IF ANS+ VSG+V S AMRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

KAG6608597.1 hypothetical protein SDJN03_01939, partial [Cucurbita argyrosperma subsp. sororia]3.3e-5095.65Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSWAEEERV EWKYGWAERT+ASMS PPMPLLAFLGVVLLLLSLQSQ+MAFDFKLFLLALPFLLIFIANSLLV+GSVASTAMRTKNRSAQEAEKTSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNRR
        AVLLFLLLILLWNRR
Subjt:  AVLLFLLLILLWNRR

KAG7037914.1 hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-53100Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNRR
        AVLLFLLLILLWNRR
Subjt:  AVLLFLLLILLWNRR

KGN60038.1 hypothetical protein Csa_001668 [Cucumis sativus]4.8e-4179.82Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M  DFKL LLALPFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

XP_022940699.1 uncharacterized protein LOC111446211 [Cucurbita moschata]1.2e-5299.13Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMA DFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNRR
        AVLLFLLLILLWNRR
Subjt:  AVLLFLLLILLWNRR

TrEMBL top hitse value%identityAlignment
A0A0A0LE80 Uncharacterized protein2.3e-4179.82Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M  DFKL LLALPFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

A0A2P5F7W0 Transmembrane protein1.3e-1547.11Show/hide
Query:  MSW-AEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQS--------QEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQE
        M W   E     WK GW ERT+AS+S PP+PL+A +G+V++LLS+ S        Q+    FKLFLL LP LLIF+ANS+   GSV   + RTK   A  
Subjt:  MSW-AEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQS--------QEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQE

Query:  AE-KTSPWGAAVLLFLLLILL
        ++   SPWG A+LL LL++L+
Subjt:  AE-KTSPWGAAVLLFLLLILL

A0A5A7V8G0 Uncharacterized protein1.1e-4181.58Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER +ASMS PPMPLLAFLGVV+LLLSLQSQ+M  DFKL LLALPFL+IF ANS+ VSG+V S AMRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

A0A5D3E6P1 Uncharacterized protein3.1e-4180.7Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER +ASMS PPMPLLAFLGVV+LLLSLQSQ+M  DFKL LLALPF +IF ANS+ VSG+V S AMRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

A0A6J1FL09 uncharacterized protein LOC1114462115.9e-5399.13Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMA DFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNRR
        AVLLFLLLILLWNRR
Subjt:  AVLLFLLLILLWNRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42146.1 unknown protein2.1e-1035.77Show/hide
Query:  MSW-AEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQS--------QEMAFDFKLFLLALPFLLIFIANSLLVSGSV---ASTAMRTKNRS
        M W  +E R   WK GW E T+ + S PP+ LLA L ++ LLL L S        ++ A + KLF+L LP L +F+  SL     +   +S ++R     
Subjt:  MSW-AEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQS--------QEMAFDFKLFLLALPFLLIFIANSLLVSGSV---ASTAMRTKNRS

Query:  AQEAEKTSPWGAAVLLFLLLILL
        +   E   PWG  ++L LLL+L+
Subjt:  AQEAEKTSPWGAAVLLFLLLILL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGGCAGAGGAAGAAAGAGTTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACAATCGCTTCCATGTCTCCCCCGCCTATGCCTCTTCTCGCCTTCCTCGGCGT
CGTCCTTCTTTTGCTTTCGTTGCAGTCCCAGGAGATGGCATTCGACTTCAAGCTCTTCCTACTAGCTTTGCCATTTTTGCTCATCTTTATTGCAAATTCCCTTCTTGTGT
CTGGTTCGGTTGCGTCGACTGCCATGAGAACCAAGAACAGGTCAGCTCAGGAGGCCGAAAAGACCTCACCTTGGGGCGCAGCGGTGTTGCTGTTTCTGCTGCTGATATTG
CTGTGGAACCGCCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGGGCAGAGGAAGAAAGAGTTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACAATCGCTTCCATGTCTCCCCCGCCTATGCCTCTTCTCGCCTTCCTCGGCGT
CGTCCTTCTTTTGCTTTCGTTGCAGTCCCAGGAGATGGCATTCGACTTCAAGCTCTTCCTACTAGCTTTGCCATTTTTGCTCATCTTTATTGCAAATTCCCTTCTTGTGT
CTGGTTCGGTTGCGTCGACTGCCATGAGAACCAAGAACAGGTCAGCTCAGGAGGCCGAAAAGACCTCACCTTGGGGCGCAGCGGTGTTGCTGTTTCTGCTGCTGATATTG
CTGTGGAACCGCCGTTAA
Protein sequenceShow/hide protein sequence
MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGAAVLLFLLLIL
LWNRR