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Carg17208 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17208
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:12978259..12978765
RNA-Seq ExpressionCarg17208
SyntenyCarg17208
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063295.1 uncharacterized protein E6C27_scaffold205G001180 [Cucumis melo var. makuwa]3.9e-5569.94Show/hide
Query:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK
        MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  PF QQ +   PPLL PPP     LRPHR+L SQPR SHSLK
Subjt:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK

Query:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN
        KSKS +++KDSAAVVDRR+PSRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Subjt:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN

KAG6608604.1 hypothetical protein SDJN03_01946, partial [Cucurbita argyrosperma subsp. sororia]2.6e-88100Show/hide
Query:  MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSI
        MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSI
Subjt:  MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSI

Query:  KRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA
        KRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA
Subjt:  KRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA

KGN60046.1 hypothetical protein Csa_001363 [Cucumis sativus]4.3e-5469.71Show/hide
Query:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSL
        MADPYFLDR+ ++G+  TR+SN FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  PF QQ +   PPLL PPP      +RPHR+L SQPR SHSL
Subjt:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSL

Query:  KKSKSIKRDKDSAAVVDRRVPSRTFSSP-AAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN
        KKSKS +++KDSAAVVDRR+PSRT SS  A AKRVVRVEE +KLSGC F VISPPPSSLPLPKF +RP K LNCN
Subjt:  KKSKSIKRDKDSAAVVDRRVPSRTFSSP-AAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN

XP_008466665.1 PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo]1.1e-5469.36Show/hide
Query:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK
        MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  PF QQ +   PPLL PPP     LRPHR+L SQPR SHSLK
Subjt:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK

Query:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN
        KSKS +++KDSA VVDRR+PSRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Subjt:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN

XP_022139188.1 uncharacterized protein LOC111010153 [Momordica charantia]1.1e-4668.16Show/hide
Query:  MADPYFLDRTSTSGYKPTR---VSN---EFHLQN-AAVYGGSHGGLLQTPPRFFSVPS-IHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSH
        MADPYFLDR   +GY  TR   +SN    ++L+N AA  G +HGGLL+TPPRFFS PS IH HQ  PFI   Q QPPPLL PPPILRPHR+L SQP  SH
Subjt:  MADPYFLDRTSTSGYKPTR---VSN---EFHLQN-AAVYGGSHGGLLQTPPRFFSVPS-IHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSH

Query:  SL--KKSKSIKRDKD--SAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN
        SL  KKSKS KR +   S AVVDRR  SRT S+ AAAKRVV+VEE D LSGCLFA +SPPPSSLPLPKFCLRP KLNCN
Subjt:  SL--KKSKSIKRDKD--SAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN

TrEMBL top hitse value%identityAlignment
A0A0A0LJ69 Uncharacterized protein2.1e-5469.71Show/hide
Query:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSL
        MADPYFLDR+ ++G+  TR+SN FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  PF QQ +   PPLL PPP      +RPHR+L SQPR SHSL
Subjt:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSL

Query:  KKSKSIKRDKDSAAVVDRRVPSRTFSSP-AAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN
        KKSKS +++KDSAAVVDRR+PSRT SS  A AKRVVRVEE +KLSGC F VISPPPSSLPLPKF +RP K LNCN
Subjt:  KKSKSIKRDKDSAAVVDRRVPSRTFSSP-AAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN

A0A1S3CRS4 uncharacterized protein LOC1035040215.4e-5569.36Show/hide
Query:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK
        MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  PF QQ +   PPLL PPP     LRPHR+L SQPR SHSLK
Subjt:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK

Query:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN
        KSKS +++KDSA VVDRR+PSRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Subjt:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN

A0A5A7VBL8 Uncharacterized protein1.9e-5569.94Show/hide
Query:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK
        MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  PF QQ +   PPLL PPP     LRPHR+L SQPR SHSLK
Subjt:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK

Query:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN
        KSKS +++KDSAAVVDRR+PSRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Subjt:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN

A0A5D3E771 Uncharacterized protein5.4e-5569.36Show/hide
Query:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK
        MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  PF QQ +   PPLL PPP     LRPHR+L SQPR SHSLK
Subjt:  MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLK

Query:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN
        KSKS +++KDSA VVDRR+PSRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Subjt:  KSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN

A0A6J1CF43 uncharacterized protein LOC1110101535.5e-4768.16Show/hide
Query:  MADPYFLDRTSTSGYKPTR---VSN---EFHLQN-AAVYGGSHGGLLQTPPRFFSVPS-IHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSH
        MADPYFLDR   +GY  TR   +SN    ++L+N AA  G +HGGLL+TPPRFFS PS IH HQ  PFI   Q QPPPLL PPPILRPHR+L SQP  SH
Subjt:  MADPYFLDRTSTSGYKPTR---VSN---EFHLQN-AAVYGGSHGGLLQTPPRFFSVPS-IHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSH

Query:  SL--KKSKSIKRDKD--SAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN
        SL  KKSKS KR +   S AVVDRR  SRT S+ AAAKRVV+VEE D LSGCLFA +SPPPSSLPLPKFCLRP KLNCN
Subjt:  SL--KKSKSIKRDKD--SAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATCCTTATTTTCTAGATCGAACGAGCACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTACGGTGGCAGCCACGG
CGGACTTTTGCAAACGCCGCCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACCACCGCCTCTTCTTACAC
CGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGGCGGCGGTGGTT
GATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCC
GCCGCCCAGTAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGACGAAGCTCAACTGTAATGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATCCTTATTTTCTAGATCGAACGAGCACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTACGGTGGCAGCCACGG
CGGACTTTTGCAAACGCCGCCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACCACCGCCTCTTCTTACAC
CGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGGCGGCGGTGGTT
GATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCC
GCCGCCCAGTAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGACGAAGCTCAACTGTAATGCGTAG
Protein sequenceShow/hide protein sequence
MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVV
DRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA