; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17217 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17217
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLYR motif-containing protein 2
Genome locationCarg_Chr01:13018356..13018766
RNA-Seq ExpressionCarg17217
SyntenyCarg17217
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608613.1 hypothetical protein SDJN03_01955, partial [Cucurbita argyrosperma subsp. sororia]4.8e-32100Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
KAG7037930.1 hypothetical protein SDJN02_01562, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-32100Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
XP_022936861.1 uncharacterized protein LOC111443321 [Cucurbita moschata]4.2e-2889.87Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MVL+LDLQEFILRARVLKLYR ALRT +KAPVHAREELRHTIRQEMENNRGC++R+KVRFLLSEGIERLKRL+EMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
XP_022941069.1 uncharacterized protein LOC111446466 [Cucurbita moschata]1.4e-3198.73Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNER+KVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
XP_023524988.1 uncharacterized protein LOC111788747 [Cucurbita pepo subsp. pepo]4.5e-3096.2Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MVL LDLQEFILRARVLKLYR ALRTAQKAPVHAREELRHTIRQEMENNRGCNER+KVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
TrEMBL top hitse value%identityAlignment
A0A6J1CHJ1 uncharacterized protein LOC1110112184.3e-2683.54Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MV+SLDL EFILRARVLKL+R ALRTA+KAPVHAREELRHTIRQEMENNR CN+++KVR+L+SEGIE LKRL+EMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
A0A6J1F8N3 uncharacterized protein LOC1114433212.0e-2889.87Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MVL+LDLQEFILRARVLKLYR ALRT +KAPVHAREELRHTIRQEMENNRGC++R+KVRFLLSEGIERLKRL+EMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
A0A6J1FM54 uncharacterized protein LOC1114464666.8e-3298.73Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNER+KVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
A0A6J1IFA5 uncharacterized protein LOC1114764188.6e-2786.08Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MVL+LDLQEFILRARVLKLYR ALRT +KAPVHAREELRHTIRQEMENNR C++R+K+RFLLSEG ERLKRL+EMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
A0A6J1IY12 uncharacterized protein LOC1114809622.0e-2893.67Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        MVLSLDLQEFILRARVLKLYR ALR AQKAPVHAREELR  IRQEMENNRGCNER+KVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76065.1 LYR family of Fe/S cluster biogenesis protein2.6e-2366.67Show/hide
Query:  VLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ
        ++ LDLQ FILRARVLKLYR AL+ A +APVH R EL+ T+RQEME NR CN+++K+R+L+SEG+ER+K L+EMLDMQ
Subjt:  VLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCATGCTTTAAGAACTGCTCAAAAAGCTCCTGTCCACGCTCGAGAGGA
ACTGAGGCATACAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAACGAGAGACGGAAAGTAAGGTTTCTGCTGAGTGAAGGAATAGAGAGATTGAAGCGTTTAGAGG
AGATGTTGGATATGCAG
mRNA sequenceShow/hide mRNA sequence
GAGGAGAATTCGCCATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCATGCTTTAAGAACTGCTCAAAAAGCTCCTGTC
CACGCTCGAGAGGAACTGAGGCATACAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAACGAGAGACGGAAAGTAAGGTTTCTGCTGAGTGAAGGAATAGAGAGATT
GAAGCGTTTAGAGGAGATGTTGGATATGCAG
Protein sequenceShow/hide protein sequence
MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ