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Carg17234 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17234
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:11018083..11018980
RNA-Seq ExpressionCarg17234
SyntenyCarg17234
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013178.1 hypothetical protein SDJN02_25934, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-88100Show/hide
Query:  MEVCVLPPGSDHFINYFPVLKQYECWHCLYAIFLSDILRCHPFFQHSHVSTYPLNQYQTQRQDKTRLKARPYRQRIDVDFNELNILEPCSKLLDSRLHVS
        MEVCVLPPGSDHFINYFPVLKQYECWHCLYAIFLSDILRCHPFFQHSHVSTYPLNQYQTQRQDKTRLKARPYRQRIDVDFNELNILEPCSKLLDSRLHVS
Subjt:  MEVCVLPPGSDHFINYFPVLKQYECWHCLYAIFLSDILRCHPFFQHSHVSTYPLNQYQTQRQDKTRLKARPYRQRIDVDFNELNILEPCSKLLDSRLHVS

Query:  TRCTPCSSEINHHLQQTSSTNKSQSKKHLLVNDKSEACIIYMLEWKVHMKFTSLFVSFVAS
        TRCTPCSSEINHHLQQTSSTNKSQSKKHLLVNDKSEACIIYMLEWKVHMKFTSLFVSFVAS
Subjt:  TRCTPCSSEINHHLQQTSSTNKSQSKKHLLVNDKSEACIIYMLEWKVHMKFTSLFVSFVAS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCTGTGTCCTCCCTCCTGGCTCCGACCACTTTATCAACTACTTTCCCGTTCTTAAGCAGTATGAATGTTGGCATTGCCTCTACGCCATATTCCTTAGCGACAT
CCTGCGTTGTCATCCATTTTTTCAGCACAGTCATGTTTCAACATACCCACTCAACCAATATCAAACACAAAGACAAGACAAGACAAGATTGAAAGCTCGACCATACCGTC
AACGTATCGACGTCGATTTTAATGAACTCAACATCCTTGAACCTTGCAGCAAACTCCTTGATAGTCGGCTCCATGTGTCGACAAGGTGCACACCATGCAGCAGTGAAATC
AATCACCATCTACAACAAACCAGCAGCACAAACAAATCACAAAGCAAAAAACACCTGCTTGTCAACGACAAATCCGAAGCATGCATTATTTATATGTTGGAATGGAAAGT
TCATATGAAATTTACAAGCTTGTTTGTTTCCTTCGTGGCTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCTGTGTCCTCCCTCCTGGCTCCGACCACTTTATCAACTACTTTCCCGTTCTTAAGCAGTATGAATGTTGGCATTGCCTCTACGCCATATTCCTTAGCGACAT
CCTGCGTTGTCATCCATTTTTTCAGCACAGTCATGTTTCAACATACCCACTCAACCAATATCAAACACAAAGACAAGACAAGACAAGATTGAAAGCTCGACCATACCGTC
AACGTATCGACGTCGATTTTAATGAACTCAACATCCTTGAACCTTGCAGCAAACTCCTTGATAGTCGGCTCCATGTGTCGACAAGGTGCACACCATGCAGCAGTGAAATC
AATCACCATCTACAACAAACCAGCAGCACAAACAAATCACAAAGCAAAAAACACCTGCTTGTCAACGACAAATCCGAAGCATGCATTATTTATATGTTGGAATGGAAAGT
TCATATGAAATTTACAAGCTTGTTTGTTTCCTTCGTGGCTTCGTAA
Protein sequenceShow/hide protein sequence
MEVCVLPPGSDHFINYFPVLKQYECWHCLYAIFLSDILRCHPFFQHSHVSTYPLNQYQTQRQDKTRLKARPYRQRIDVDFNELNILEPCSKLLDSRLHVSTRCTPCSSEI
NHHLQQTSSTNKSQSKKHLLVNDKSEACIIYMLEWKVHMKFTSLFVSFVAS