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Carg17248 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17248
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:10962063..10963611
RNA-Seq ExpressionCarg17248
SyntenyCarg17248
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574106.1 Alpha-amylase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2498.36Show/hide
Query:  MALSNCFNDEENDAECVRSDLSLISTWDSLFLSSNSPFVTTNSLAKSEDFSESFWVFTVQK
        MALSNCFNDEENDAECVRSDLSLISTWDSLFLSSNSPFVTTNSLAKSEDFSESFWVFTVQ+
Subjt:  MALSNCFNDEENDAECVRSDLSLISTWDSLFLSSNSPFVTTNSLAKSEDFSESFWVFTVQK
KAG7013164.1 hypothetical protein SDJN02_25920 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-26100Show/hide
Query:  MALSNCFNDEENDAECVRSDLSLISTWDSLFLSSNSPFVTTNSLAKSEDFSESFWVFTVQKSTE
        MALSNCFNDEENDAECVRSDLSLISTWDSLFLSSNSPFVTTNSLAKSEDFSESFWVFTVQKSTE
Subjt:  MALSNCFNDEENDAECVRSDLSLISTWDSLFLSSNSPFVTTNSLAKSEDFSESFWVFTVQKSTE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGAGTAATTGCTTCAATGATGAGGAGAATGACGCGGAGTGTGTGCGGTCTGATCTGTCTTTGATTTCCACTTGGGATTCACTGTTTCTCAGTTCCAATTCTCC
ATTTGTCACCACAAATTCACTCGCTAAGAGCGAAGATTTCTCCGAAAGCTTCTGGGTTTTCACAGTGCAGAAAAGTACTGAATGA
mRNA sequenceShow/hide mRNA sequence
AGTGTGGAAACCTCTTTCTAGTAGACACGTTTTAAAAACCTCGAAGGAAAAGCTAAAGAGGACAATATCTATTAGCGGTGGATATGGGCCGTTACCGTGGATCTTAGCTT
GGATGATAAAGTTGAACTAAGAAATGGATTGACAAATTATTAGACAACTGAGAGAGCACCATATAAGCCTGATGATTGAATCAAGTGGTTTGACTGCTAAAAGTTATTGG
AATAAGGATTCATTTGTTGTTGGAATCATAGTGGATATTGAATGGCTTCTCATTCTCATCTGGTTTATATATTATATAACTTATTGACATGTGTGTTCTTACGCCATATC
CACTTTCTCAATGCATACACCAACCGATCGAGAAAGCAAAGGTATGCAGCTATGGACAAAATATTATCATAAAATACAAGATTGTGGGTGGCCGACGGTGAACCGAAAGG
TCCCGAACCGTTCGGAATCCGCCGCGTGGACGGCAGAGAAAAGAATCCATCATTAGAAACAACTGAAAAGACCTGACCCATTTCGGCAAATTCTGATTCAGTCGGAGCTT
TTGAGTGAAAATGGGTTACCTAATTCGCACAGTTCCTCCACTATGGCGCTGAGTAATTGCTTCAATGATGAGGAGAATGACGCGGAGTGTGTGCGGTCTGATCTGTCTTT
GATTTCCACTTGGGATTCACTGTTTCTCAGTTCCAATTCTCCATTTGTCACCACAAATTCACTCGCTAAGAGCGAAGATTTCTCCGAAAGCTTCTGGGTTTTCACAGTGC
AGAAAAGTACTGAATGA
Protein sequenceShow/hide protein sequence
MALSNCFNDEENDAECVRSDLSLISTWDSLFLSSNSPFVTTNSLAKSEDFSESFWVFTVQKSTE