; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17257 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17257
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionbinding partner of ACD11 1-like
Genome locationCarg_Chr18:10892250..10897127
RNA-Seq ExpressionCarg17257
SyntenyCarg17257
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574098.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-17999.71Show/hide
Query:  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNP
        MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNP
Subjt:  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNP

Query:  GGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPS
        GGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPS
Subjt:  GGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPS

Query:  AQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA
        AQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA
Subjt:  AQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA

Query:  AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGL+H
Subjt:  AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

KAG7013155.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-180100Show/hide
Query:  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNP
        MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNP
Subjt:  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNP

Query:  GGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPS
        GGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPS
Subjt:  GGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPS

Query:  AQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA
        AQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA
Subjt:  AQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA

Query:  AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

XP_022945905.1 binding partner of ACD11 1-like [Cucurbita moschata]7.4e-130100Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
        MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
Subjt:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT

Query:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
        PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
Subjt:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

XP_022968306.1 binding partner of ACD11 1-like isoform X1 [Cucurbita maxima]1.5e-12798.36Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
        MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
Subjt:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT

Query:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
        P SAQRSQF ST GTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
Subjt:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALF+SDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

XP_023541311.1 binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo]9.1e-12899.18Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
        MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSG HEEDGT
Subjt:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT

Query:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
        P SAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
Subjt:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

TrEMBL top hitse value%identityAlignment
A0A0A0KSM6 RRM domain-containing protein4.1e-11890.57Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
        MNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED T
Subjt:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT

Query:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
        P SAQRSQF+S+AG AV+MAQ+VVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAGYEA K++DEKYHVL+TTKSAISATG
Subjt:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

A0A1S3BET5 binding partner of ACD11 15.9e-11789.75Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
        MNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSG+DACTAYV+FKDAYSQETACLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED T
Subjt:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT

Query:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
          SAQRSQF+S+AG AV+MAQ+VVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAG+EA K++DEKYHVL+TTKSAISATG
Subjt:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

A0A5D3CVI0 Binding partner of ACD11 15.9e-11789.75Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
        MNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSG+DACTAYV+FKDAYSQETACLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED T
Subjt:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT

Query:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
          SAQRSQF+S+AG AV+MAQ+VVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAG+EA K++DEKYHVL+TTKSAISATG
Subjt:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

A0A6J1G2B1 binding partner of ACD11 1-like3.6e-130100Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
        MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
Subjt:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT

Query:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
        PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
Subjt:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

A0A6J1HUH9 binding partner of ACD11 1-like isoform X17.5e-12898.36Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
        MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
Subjt:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT

Query:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
        P SAQRSQF ST GTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG
Subjt:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALF+SDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

SwissProt top hitse value%identityAlignment
B8APB5 Transcription factor ILI61.1e-2269.47Show/hide
Query:  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLI
        MSSR SRSR+S   SS I+DEQI+DL+SKLQ L+PE R  RS+ RV +S+VLQETCNYIRSL +EV DLS+RLSELL ++D  SAQAAIIRSLL+
Subjt:  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLI

Q0DUR2 Transcription factor ILI61.1e-2269.47Show/hide
Query:  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLI
        MSSR SRSR+S   SS I+DEQI+DL+SKLQ L+PE R  RS+ RV +S+VLQETCNYIRSL +EV DLS+RLSELL ++D  SAQAAIIRSLL+
Subjt:  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLI

Q8GW32 Transcription factor PRE61.5e-2475.27Show/hide
Query:  SSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLL
        S RSSRSR+S   SS ISD+QI+DL+SKLQ LIPE+R  R S +VSASKVLQETCNYIR+L REV DLSDRLSELL STD  SA+AAIIRSLL
Subjt:  SSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLL

Q9LFD5 Binding partner of ACD11 18.8e-3339.83Show/hide
Query:  TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQR
        +V+V  LS  ATE DI +FF+FSG +E ++I +S E   +AYV+FK+    ETA LLSGA+I DQ V I       E    +S P+  H E  +      
Subjt:  TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQR

Query:  SQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----YEAAKTMDEKYHVLQTTKSAISATGRT
            S A + V  A+DVV +MLA G++LGKD   KAKAFDE H  ++TA A VA L  +IGL+  + AG     E  K +D+ + V + TKS  +A  +T
Subjt:  SQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----YEAAKTMDEKYHVLQTTKSAISATGRT

Query:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE
         ++A   V+++ Y   G  + + A NR A+AA ++G +  E
Subjt:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE

Q9LXG5 Transcription factor PRE21.4e-2267.78Show/hide
Query:  SSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLL
        SSR  R +  SS ISD+QI DLISKL+Q IPEIR  R S+ VSASKVLQETCNYIR+L +E  DLSDRL++LL S DP S QAA+IRSL+
Subjt:  SSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLL

Arabidopsis top hitse value%identityAlignment
AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-7965.55Show/hide
Query:  GYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPS-GYHEEDGTPPS
        GY VEVTGLSP  T  D++DFF+FSG I+ ++IVRSGE ACTAYV FKD+YSQETA LL+GATI+DQRVCITRWG   EEFDFW+  S G+ +E  +   
Subjt:  GYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPS-GYHEEDGTPPS

Query:  AQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA
        AQRS+F   AG AV+ AQ+VVK MLA G+VLGKD  +KAKAFDESH VSA A A+V+ L  RIGLTD I  G EA +  D++YHV  T KSA+ ATGRTA
Subjt:  AQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA

Query:  AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG
        AAAA +VV SSYFS GAL++S AL RAAKAA+DLG+RG
Subjt:  AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG

AT3G01210.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.1e-5248.41Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT
        M P GY  +VT LSP+ATEKD+  FF+  G +ELVEI     DA TAYV+F+DAY+ + A LLSGATIVDQ V I+ +G +  E +     +   EED +
Subjt:  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGT

Query:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAI----
            +   F S+ G A+++AQ VV+TMLA GYVL KD   KAKA DES + S+  A K+A++S+ +GLT  I +  E  ++ DEKYH    TKSA+    
Subjt:  PPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAI----

Query:  -------SATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG
               + TG+ AAAAA +VV S YF+ GAL+ SDAL RAAKAAA +G  G
Subjt:  -------SATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.1e-3638.59Show/hide
Query:  TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQR
        TV+V+ +S  AT++D+ +FF+FSG I  +E     E    AYV+FKD    ETA LLSGATIVD  V ++         D+   P      +  P  + +
Subjt:  TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQR

Query:  SQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGY----EAAKTMDEKYHVLQTTKSAISATGRT
        S       + +  A+DVV +MLA G++LGKD   KAK+ DE HQ+++TA+AKVA    +IG TD I  G     E  + +D+KY V + TKSAI+A  +T
Subjt:  SQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGY----EAAKTMDEKYHVLQTTKSAISATGRT

Query:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE
         + A   ++++ Y   GA +++ A N+ AKAA ++G +  E
Subjt:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE

AT5G16840.2 binding partner of acd11 17.3e-3539.83Show/hide
Query:  TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQR
        +V+V  LS  ATE DI +FF+FSG +E ++I  S E   +AYV+FK+    ETA LLSGA+I DQ V I       E    +S P+  H E  +      
Subjt:  TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQR

Query:  SQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----YEAAKTMDEKYHVLQTTKSAISATGRT
            S A + V  A+DVV +MLA G++LGKD   KAKAFDE H  ++TA A VA L  +IGL+  + AG     E  K +D+ + V + TKS  +A  +T
Subjt:  SQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----YEAAKTMDEKYHVLQTTKSAISATGRT

Query:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE
         ++A   V+++ Y   G  + + A NR A+AA ++G +  E
Subjt:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.6e-3636.93Show/hide
Query:  TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQR
        TV+V+ +S +ATE+D+ +FF+FSG I  +E     + +  AYV+FKD    ETA LL+G+TIVD  V +T         D+   P      +    S + 
Subjt:  TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQR

Query:  SQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----YEAAKTMDEKYHVLQTTKSAISATGRT
        S       +    A+DVV  M++ G+VLGKD   KAK+ DE HQ+++TA+A+V     RIG T+ I  G     E  K +D+K+ V + TKSAI+A  +T
Subjt:  SQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----YEAAKTMDEKYHVLQTTKSAISATGRT

Query:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE
         + A   ++++ Y   GA +++ A NR +KAA ++G +  E
Subjt:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCAGAAGCTCGCGTTCTAGGCGCTCATCTGTGCCTTCTAGCAACATTTCTGATGAACAAATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGAT
TCGCAATGCGCGTTCCTCCTCCAGGGTATCAGCTTCAAAGGTTCTTCAAGAGACCTGCAACTACATAAGAAGCTTACAAAGGGAGGTGGGCGACTTAAGCGACCGATTAT
CAGAGCTGTTGCTATCAACTGACCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTCATCGAAAACATGAATCCTGGTGGGTATACGGTTGAAGTGACGGGCTTG
TCTCCTAAAGCAACGGAGAAGGATATCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTGAGGTCTGGTGAAGATGCCTGCACTGCATATGTGTC
ATTCAAAGATGCTTACTCTCAAGAGACTGCTTGCCTGCTGAGTGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGAAGAATTTGATT
TCTGGAGCAGGCCTTCCGGTTACCATGAAGAAGATGGTACTCCTCCTTCGGCTCAAAGAAGTCAGTTTGTTTCCACCGCTGGAACCGCAGTGTCCATGGCCCAGGACGTA
GTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGCAAAGATACATTTACGAAAGCCAAAGCATTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGC
TGATTTGAGTAACAGAATTGGCCTTACTGACATGATTGGTGCAGGGTATGAAGCGGCTAAAACCATGGATGAGAAGTACCACGTATTGCAGACAACCAAATCAGCTATAT
CAGCCACTGGAAGAACAGCTGCTGCTGCTGCTGATACGGTGGTCAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATGTCCGATGCCCTGAATCGAGCTGCCAAAGCT
GCAGCTGACTTGGGTAGTCGTGGTCTCGAACATTAA
mRNA sequenceShow/hide mRNA sequence
CATCCTCACAATTAGACTCTTCATCAACCCCTTATCTCTTTCATTTACATACAGTTCCAACATTGAGCTTAATTATTTTCGTGTACCATATCAAATCCTGTATCCAAACT
TAATTACATAACATGGGTGTGTGCAGTGCTCTGAAGCTGACATTAGGAGGCCCGCTTACTCTTAATAGCCATAGAACACCATATATGTGCTTACATGCGCAACCAAGTTG
AAATTTTTAGCCCCAGTTTGGAGACAGATCGAGCAGGGACGGTATGGCCATGGCCGCATGCTGCTTTCCTTCTTATTTCAAGCTTATAATAAGCAGTATTAGGACTGTGG
TCAAGTTGTCCTGTTCGACCCCAACAAATAGTGGATTACTAATTCTATAAACACTTCGAGTTTCTTTTCATGGATCCCATATCTCTTTGTCCATCAACATATCATCCCTC
TTCTTCTAACACCTGCTGCCTTGCTAACATCAGTATAGATTTAGCATAGCAGGTAGCAGCCCACAAGCCTTCTTCTTAAGTTTAGACCATAATGTCGTCCAGAAGCTCGC
GTTCTAGGCGCTCATCTGTGCCTTCTAGCAACATTTCTGATGAACAAATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGATTCGCAATGCGCGTTCCTCC
TCCAGGGTATCAGCTTCAAAGGTTCTTCAAGAGACCTGCAACTACATAAGAAGCTTACAAAGGGAGGTGGGCGACTTAAGCGACCGATTATCAGAGCTGTTGCTATCAAC
TGACCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTCATCGAAAACATGAATCCTGGTGGGTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACGGAGA
AGGATATCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTGAGGTCTGGTGAAGATGCCTGCACTGCATATGTGTCATTCAAAGATGCTTACTCT
CAAGAGACTGCTTGCCTGCTGAGTGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGAAGAATTTGATTTCTGGAGCAGGCCTTCCGG
TTACCATGAAGAAGATGGTACTCCTCCTTCGGCTCAAAGAAGTCAGTTTGTTTCCACCGCTGGAACCGCAGTGTCCATGGCCCAGGACGTAGTCAAAACCATGCTGGCCA
TGGGTTACGTGCTGGGCAAAGATACATTTACGAAAGCCAAAGCATTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGATTTGAGTAACAGAATT
GGCCTTACTGACATGATTGGTGCAGGGTATGAAGCGGCTAAAACCATGGATGAGAAGTACCACGTATTGCAGACAACCAAATCAGCTATATCAGCCACTGGAAGAACAGC
TGCTGCTGCTGCTGATACGGTGGTCAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATGTCCGATGCCCTGAATCGAGCTGCCAAAGCTGCAGCTGACTTGGGTAGTC
GTGGTCTCGAACATTAAGACGTTAGAGAGTCCTTCTGCTCATCCATTGTAAATAAAGCACTGATATTTTAATCAGAACGTACATATCTGAAAGCTGTATGTATAAATTTT
ACATTTCATAGAGTTCAATCACACCAGTCATTTGAACCTCTAAAATTTGCTATATTTTAGCCTCTGAATAGTCGGTAAAATACGAGTCGAATCGTCTCCCAGATTGTACT
TTTTACTATCCTGCTTACAGATTGTCTTCTCCTTAATCTGTTTGTTCGTTGAAGTTACTCTCAAATTCGATAGACTTATTTGGTTCGTTTAGACTGTTGTACTGTCTATA
GGGATGCCATATGGATGGATGCATGATTTAGGCGCAACAAGAATGAAGTCCCGCAAGCAATATCATGTTTTTGCCGCCTAGGATGGTTCCTTCCAG
Protein sequenceShow/hide protein sequence
MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNPGGYTVEVTGL
SPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDV
VKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKA
AADLGSRGLEH