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Carg17287 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17287
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGCK domain-containing protein
Genome locationCarg_Chr18:10747188..10747691
RNA-Seq ExpressionCarg17287
SyntenyCarg17287
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR012891 - GCK


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574065.1 hypothetical protein SDJN03_27952, partial [Cucurbita argyrosperma subsp. sororia]2.4e-7398.01Show/hide
Query:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
        MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
Subjt:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF

Query:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVN
        EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPD NSNVLE++
Subjt:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVN

KAG7013125.1 hypothetical protein SDJN02_25881, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-83100Show/hide
Query:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
        MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
Subjt:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF

Query:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK
        EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK
Subjt:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK

XP_022945633.1 uncharacterized protein LOC111449816 [Cucurbita moschata]4.1e-8198.8Show/hide
Query:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
        MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGE DQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
Subjt:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF

Query:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK
        EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPD NSNVLEVNEGSNNSEEQKASAGSK
Subjt:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK

XP_022968451.1 uncharacterized protein LOC111467693 [Cucurbita maxima]1.1e-8198.8Show/hide
Query:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
        MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
Subjt:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF

Query:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK
        EVTGALKKCMEAHADYYEPILKAEKMAEEEAI+ELEKEMTPD NSNVLEVNEGSNNSEEQKASAGSK
Subjt:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK

XP_023542530.1 uncharacterized protein LOC111802412 [Cucurbita pepo subsp. pepo]3.4e-8097.6Show/hide
Query:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
        MSTSN+KLQ AESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEK+KEDIVEKCF
Subjt:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF

Query:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK
        EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPD NSNVLEVNEGSNNSEEQKASAGSK
Subjt:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK

TrEMBL top hitse value%identityAlignment
A0A0A0KU46 GCK domain-containing protein2.2e-5676.16Show/hide
Query:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPES-----GGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDI
        MSTS SKLQDAESNAAATKTLED+ QS +P   EEKSS E   SGKI ES     GGED EEEEEGECGFCLFMKGGGC+DSF+ WEKCIEEAEKNKEDI
Subjt:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPES-----GGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDI

Query:  VEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK
        VEKCFEVTGALKKCMEAH DYYEPILKAEKMAEEEAIIELEKE TP         ++   NS+EQKAS G K
Subjt:  VEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK

A0A6J1DDG6 uncharacterized protein LOC1110190933.2e-5573.33Show/hide
Query:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGED--------PEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNK
        MSTS SKLQ +ESNAA +KTLED+   GS I  EEK+S E   SGKIPESGG+D         EEEEEGECGFCLFMKGGGC+DSF++WEKCIEEAEKNK
Subjt:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGED--------PEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNK

Query:  EDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDE-----NSNVLEVNEGSNNSEEQKASAGSK
        EDIVEKCFEVTGALKKCMEAHADYY PILKAEK+AEEEAIIELEKE+  +      NS   EVN GS NSEEQKASAG K
Subjt:  EDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDE-----NSNVLEVNEGSNNSEEQKASAGSK

A0A6J1G1F8 uncharacterized protein LOC1114498162.0e-8198.8Show/hide
Query:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
        MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGE DQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
Subjt:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF

Query:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK
        EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPD NSNVLEVNEGSNNSEEQKASAGSK
Subjt:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK

A0A6J1HUW5 uncharacterized protein LOC1114676935.2e-8298.8Show/hide
Query:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
        MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF
Subjt:  MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCF

Query:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK
        EVTGALKKCMEAHADYYEPILKAEKMAEEEAI+ELEKEMTPD NSNVLEVNEGSNNSEEQKASAGSK
Subjt:  EVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK

A0A6J1K434 uncharacterized protein LOC1114921084.9e-5676.7Show/hide
Query:  MSTSNSKLQDAESN--AAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDP-----EEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKE
        MSTS SKLQDAESN  AAA KT ED+QQ G+P   EEKS  E  QSGKI ESGGED      +EEEEGECGFCLFMKGGGC+DSFVEWEKCIEEAEKNKE
Subjt:  MSTSNSKLQDAESN--AAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDP-----EEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKE

Query:  DIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPD-----ENSNVLEVNEGSNNSEEQKASA
        DIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAE EAIIELEKE TP+      +S  LEV  G+ N EEQKASA
Subjt:  DIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPD-----ENSNVLEVNEGSNNSEEQKASA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14048.1 GCK domain-containing protein2.4e-0740.66Show/hide
Query:  SGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHADYYEPILKAEKMAEEEAIIELEKEM
        S  E  EEEE+GE  F  FM+GGGCK+ F +WE C +EA             V   + KCM     D+Y P L A+K A+E     +EKE+
Subjt:  SGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHADYYEPILKAEKMAEEEAIIELEKEM

AT1G14060.1 GCK domain-containing protein4.1e-3150Show/hide
Query:  SNSKLQDAESNAAATKTLEDEQQSGSPIPPEE--------KSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDI
        S+ K Q+ E    A      +    +P P EE        +   + +   K  E GG D + EEEGECGFCLFMKGGGCKDSFV WE+C+E AEKNKEDI
Subjt:  SNSKLQDAESNAAATKTLEDEQQSGSPIPPEE--------KSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDI

Query:  VEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLE
        V  C EVT  LKKCM+ H+DYY+PIL AEK AE E   ELE E   +E   + E
Subjt:  VEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLE

AT5G02210.1 GCK domain-containing protein1.0e-1351.14Show/hide
Query:  EEEEEGECGFCLFMKGGGCKDSFVEW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEM
        E  EE +  F  FMKGGGCK+SF  W + C    EEAEKNK D+V KC  + G   KCM+ H+DYY PIL  +K  EE     LEKE+
Subjt:  EEEEEGECGFCLFMKGGGCKDSFVEW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEM

AT5G57570.1 GCK domain-containing protein1.3e-1348.75Show/hide
Query:  ESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKN-KEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMA
        E+G    EEEE GEC  C F+KGG CK+SF+  E+C++EAE++ +E    KC EV    K CM  +  YYEPIL  E  A
Subjt:  ESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKN-KEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMA

AT5G57640.1 GCK domain-containing protein2.3e-1338.06Show/hide
Query:  LQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALK
        L + + +   +KTL ++Q          +  G+ ++S  + E    D  EEE GEC  C F+KGG CK++F E E C +EA+KN ED V KC E     K
Subjt:  LQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALK

Query:  KCMEAHADYYEPILKAEKMAEEEAIIEL---EKE
         CM  +  YYEP+L  E  A  + + EL   EKE
Subjt:  KCMEAHADYYEPILKAEKMAEEEAIIEL---EKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTTCGAATTCGAAGCTCCAAGACGCAGAATCAAACGCTGCCGCCACTAAAACCCTGGAGGATGAACAGCAATCGGGATCCCCAATTCCTCCCGAGGAAAAATC
TTCCGGGGAACCAGATCAATCAGGAAAGATCCCTGAAAGTGGAGGGGAGGATCCTGAAGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGCGGTT
GCAAAGATAGCTTCGTAGAGTGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTTGAGAAGTGCTTCGAAGTGACTGGAGCTCTGAAGAAGTGTATG
GAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAGATGGCGGAGGAGGAGGCGATTATCGAATTGGAGAAGGAAATGACTCCGGATGAAAATTCCAATGT
CCTCGAGGTAAATGAGGGTTCTAACAATTCGGAAGAACAGAAGGCCTCTGCCGGTAGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACTTCGAATTCGAAGCTCCAAGACGCAGAATCAAACGCTGCCGCCACTAAAACCCTGGAGGATGAACAGCAATCGGGATCCCCAATTCCTCCCGAGGAAAAATC
TTCCGGGGAACCAGATCAATCAGGAAAGATCCCTGAAAGTGGAGGGGAGGATCCTGAAGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGCGGTT
GCAAAGATAGCTTCGTAGAGTGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTTGAGAAGTGCTTCGAAGTGACTGGAGCTCTGAAGAAGTGTATG
GAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAGATGGCGGAGGAGGAGGCGATTATCGAATTGGAGAAGGAAATGACTCCGGATGAAAATTCCAATGT
CCTCGAGGTAAATGAGGGTTCTAACAATTCGGAAGAACAGAAGGCCTCTGCCGGTAGTAAGTGA
Protein sequenceShow/hide protein sequence
MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCM
EAHADYYEPILKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQKASAGSK