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Carg17306 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17306
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionChromatin modification-related protein Eaf7/MRGBP
Genome locationCarg_Chr18:10622803..10625352
RNA-Seq ExpressionCarg17306
SyntenyCarg17306
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0035267 - NuA4 histone acetyltransferase complex (cellular component)
InterPro domainsIPR012423 - Chromatin modification-related protein Eaf7/MRGBP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574046.1 hypothetical protein SDJN03_27933, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1898.11Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
        MESGGKGRDEEQDGMSVHSPCK PPSSASSLPKEQAQIELELKLLQALEIYPL
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
KAG7013106.1 hypothetical protein SDJN02_25862 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-24100Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPLAYIAILFSSG
        MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPLAYIAILFSSG
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPLAYIAILFSSG
XP_022945110.1 uncharacterized protein LOC111449449 [Cucurbita moschata]8.3e-19100Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
        MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
XP_022968533.1 uncharacterized protein LOC111467738 [Cucurbita maxima]3.2e-1896.23Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
        MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQ+QIELELK+LQALEIYPL
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
XP_038893367.1 uncharacterized protein LOC120082183 [Benincasa hispida]9.2e-1896.23Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
        MESGGKGR+EEQDGMSVHSPCKAPPSSASSLPKEQ QIELELKLLQALEIYPL
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
TrEMBL top hitse value%identityAlignment
A0A1S3BFV8 uncharacterized protein LOC1034891781.3e-1794.34Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
        MESGGKGR+EEQDG+SVHSPCKAPPSSASSLPKEQ QIELELKLLQALEIYPL
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
A0A6J1FZZ7 uncharacterized protein LOC1114494494.0e-19100Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
        MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
A0A6J1GWG3 uncharacterized protein LOC1114582041.3e-1794.34Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
        MESGGKGR+EEQDG+SVHSPCKAPPSSASSLPKEQ QIELELKLLQALEIYPL
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
A0A6J1HYA5 uncharacterized protein LOC1114677381.5e-1896.23Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
        MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQ+QIELELK+LQALEIYPL
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
A0A6J1J1E0 uncharacterized protein LOC1114825261.3e-1794.34Show/hide
Query:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
        MESGGKGR+EEQDG+SVHSPCKAPPSSASSLPKEQ QIELELKLLQALEIYPL
Subjt:  MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26470.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).1.6e-1579.59Show/hide
Query:  GGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYP
        GGK ++EEQDG+SVHSPCKA PSSASSL KEQ+Q+ELEL+LL+ALEIYP
Subjt:  GGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGCGGCGGCAAAGGGAGAGATGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCTCCTCCGTCATCCGCTTCTTCTCTTCCCAAGGAGCAAGCACA
GATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTAGCATACATCGCCATTTTGTTCTCTTCGGGTTGA
mRNA sequenceShow/hide mRNA sequence
CAGAAATCACGGGGAAGTTTCTAATTACGAAGTTCGGTTCAATCTGGAGGGAAAACAAGAAAAGAGGAAGAACTAAGACTAAAAACTCCGGCGAAGCATTTCTCTTCGAC
TAAGAACGTCTATTGCGATTGGCAGTTTCTTCATGGAAAGCGGCGGCAAAGGGAGAGATGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCTCCTCCGTCA
TCCGCTTCTTCTCTTCCCAAGGAGCAAGCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTAGCATACATCGCCATTTTGTTCTCTTCGGG
TTGATGGAGTTTCTAAGAAGAAGGTTTTCTCTGCCCCATCTTTGATCGTCAGTTCTCTTCTGATGAAGTTCTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGA
AGCCAGACGATGAGGAAATGGAAATTCTGAATCACGAGGAAGATTTCTGCCTACCACAAACCTTCTTTGTCAAAGAAGAGTCTTAAGGGAAATTGTTCATATGGATGGTA
CCTTAGCCCTTCCTGGCATCTTTCTACTGTCGATCCCTTGTCGATCCCTTTTTGTTTTGTAAATGTCAATACAGAATCTTTTGCTGGATAGTATAATAAAAAAATTTCCT
TTGTAAAGATGAATTCCTTAGTTTCTATACACGAGGGGTGTTCTCTGTTCCGCATGCCATACTTCCATTGAAATGCCCTCCAATCTAGGAGTTCACATTTTCTGTGTTTT
T
Protein sequenceShow/hide protein sequence
MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPLAYIAILFSSG