; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17315 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17315
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosome maturation factor RimP
Genome locationCarg_Chr18:10576054..10578411
RNA-Seq ExpressionCarg17315
SyntenyCarg17315
Gene Ontology termsGO:0042274 - ribosomal small subunit biogenesis (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574039.1 Serine/threonine-protein kinase dst1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-168100Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
        DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
Subjt:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK

KAG7013097.1 rimP, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-172100Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
        DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
Subjt:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

XP_022944994.1 uncharacterized protein LOC111449365 [Cucurbita moschata]9.2e-17299.67Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
        DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
Subjt:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLK+PFGNHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

XP_022967944.1 uncharacterized protein LOC111467332 isoform X1 [Cucurbita maxima]1.4e-16497.06Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        MSGSRIARTLLHRARR AAFSSFSSAGRPSSIVF ADARSSQSSCSSSS HVHFRREHAFAFSPSPTVRLFNTNCSKEFEDE+K  NPLQY RDEGEETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
        DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQ GDDI LYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
Subjt:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

XP_023541150.1 uncharacterized protein LOC111801398 isoform X1 [Cucurbita pepo subsp. pepo]1.0e-16295.75Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        MSG+ IARTLLHR+RR AAF SFSSAGRPSS+VF ADARSSQSSCSSSS HVHFRREHAFAFSPSPTVR FNTN SKEFEDEVKE NPLQYGRDEGEETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
        DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDI LYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
Subjt:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPM+VCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

TrEMBL top hitse value%identityAlignment
A0A1S3BEL4 uncharacterized protein LOC103489189 isoform X11.0e-12376.74Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        M G++IARTLL R+R PA  S  SS G PSS VF ++A   Q++CSS S      R+HAF FSP+ T+RLF+T+ SK+F DEVKE NPLQYGR++  ETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEE-DDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGN
        DGWEE DDDLEPELGDGG GGGVVLQGVPWGE VL LA EVLLQFGDDI LYSFK T RGYIYVRLDKLS+++GCPS+EEL+SYS+EYKKRLDETGALGN
Subjt:  DGWEE-DDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGN

Query:  IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHK
        IPDDLALEVSSPGAERLLKVPDDL RFKA PMRV YIED +SRG+ENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPLTRKQK+WRLKLP+ NHK
Subjt:  IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHK

Query:  K
        K
Subjt:  K

A0A1S3BF38 uncharacterized protein LOC103489189 isoform X32.6e-12777.2Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        M G++IARTLL R+R PA  S  SS G PSS VF ++A   Q++CSS S      R+HAF FSP+ T+RLF+T+ SK+F DEVKE NPLQYGR++  ETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEE-DDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGN
        DGWEE DDDLEPELGDGG GGGVVLQGVPWGE VL LA EVLLQFGDDI LYSFK T RGYIYVRLDKLS+++GCPS+EEL+SYS+EYKKRLDETGALGN
Subjt:  DGWEE-DDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGN

Query:  IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHK
        IPDDLALEVSSPGAERLLKVPDDL RFKA PMRV YIED +SRG+ENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPLTRKQK+WRLKLP+ NHK
Subjt:  IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHK

Query:  KVFLYLE
        KVFLYLE
Subjt:  KVFLYLE

A0A6J1D5R7 uncharacterized protein LOC1110175623.4e-13278.43Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        MSG+RIA T LHRAR  A  SS SS  RPSS  F A++RS +SSCSSSS HV F R+HAFA SP+  +RLF+TN +K FEDEV+E  PLQY +DEG ETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
        DGWE+DDD+EPE+GDGGGGGGVVLQGVPWGE VL+LAHEVLLQFGDDI LYSFKTT RGYIYVRLDKLSNE+GCPSLE+LESY+QEYKKRL  TGALG I
Subjt:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPM+V Y+ED    GTENDGVF++DHV+ ES+SCVWKLANV+ENRDPLSKGRPLTRKQK+WRL+LP+ NHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

A0A6J1FZQ6 uncharacterized protein LOC1114493654.4e-17299.67Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
        DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
Subjt:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLK+PFGNHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

A0A6J1HY61 uncharacterized protein LOC111467332 isoform X16.9e-16597.06Show/hide
Query:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT
        MSGSRIARTLLHRARR AAFSSFSSAGRPSSIVF ADARSSQSSCSSSS HVHFRREHAFAFSPSPTVRLFNTNCSKEFEDE+K  NPLQY RDEGEETT
Subjt:  MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
        DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQ GDDI LYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI
Subjt:  DGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

SwissProt top hitse value%identityAlignment
B0SH16 Ribosome maturation factor RimP5.7e-0739.73Show/hide
Query:  IYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV
        I + LD L+++ G  SLE+ E+ S+  K+ LD+ G       D  L+VSS GAER+L++P+DL RF+ + +++
Subjt:  IYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV

Q04U33 Ribosome maturation factor RimP1.0e-0838.74Show/hide
Query:  LYSFKTTLR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTE
        LYS K   R     I V LD L + YG  SL E E  S++ K+ L+        PD D  L+VSS GAER L +P+D+ RF+ +P+R+ +   GES   +
Subjt:  LYSFKTTLR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTE

Query:  NDGVFMMDHVD
         +G+F + + D
Subjt:  NDGVFMMDHVD

Q04ZJ3 Ribosome maturation factor RimP1.0e-0838.74Show/hide
Query:  LYSFKTTLR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTE
        LYS K   R     I V LD L + YG  SL E E  S++ K+ L+        PD D  L+VSS GAER L +P+D+ RF+ +P+R+ +   GES   +
Subjt:  LYSFKTTLR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTE

Query:  NDGVFMMDHVD
         +G+F + + D
Subjt:  NDGVFMMDHVD

Q72NX1 Ribosome maturation factor RimP1.3e-0838.74Show/hide
Query:  LYSFKTTLR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTE
        LYS K   R     I V LD L + YG  SL E E  S++ K+ L+        PD D  L+VSS GAER L +P DL RF+ +P+R+ +    E    E
Subjt:  LYSFKTTLR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTE

Query:  NDGVFMMDHVD
         +G+F + + D
Subjt:  NDGVFMMDHVD

Q8F7K3 Ribosome maturation factor RimP1.3e-0838.74Show/hide
Query:  LYSFKTTLR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTE
        LYS K   R     I V LD L + YG  SL E E  S++ K+ L+        PD D  L+VSS GAER L +P DL RF+ +P+R+ +    E    E
Subjt:  LYSFKTTLR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTE

Query:  NDGVFMMDHVD
         +G+F + + D
Subjt:  NDGVFMMDHVD

Arabidopsis top hitse value%identityAlignment
AT1G69210.1 Uncharacterised protein family UPF00901.3e-7555.76Show/hide
Query:  SSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWE--EDDDLEPELGDGGGGGGVVLQGVPWGERVLALA
        SS S+ SSSS             SPSP+ R   T  S   E++       +Y   +  E  + WE  ED+D+E +LGDGG GGG+VL+GV WGERVL++A
Subjt:  SSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWE--EDDDLEPELGDGGGGGGVVLQGVPWGERVLALA

Query:  HEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIE
         +VL Q   D+ L++FKT+ RGYIYVRLDKLS EYGCP+++ELE +S+E+KKRLD+ GA   IP+DLALEVSSPGAERLL+VP+DL RFK MPM V Y+E
Subjt:  HEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIE

Query:  DGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKKVFLYLE
        +  SR     GVF+++ +D ES++CVWKLA+V+ENRDP SKGRPL+RKQKD R+ LPF +HKK+ LYL+
Subjt:  DGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKKVFLYLE

AT1G69210.2 Uncharacterised protein family UPF00901.7e-3550.88Show/hide
Query:  SSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWE--EDDDLEPELGDGGGGGGVVLQGVPWGERVLALA
        SS S+ SSSS             SPSP+ R   T  S   E++       +Y   +  E  + WE  ED+D+E +LGDGG GGG+VL+GV WGERVL++A
Subjt:  SSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWE--EDDDLEPELGDGGGGGGVVLQGVPWGERVLALA

Query:  HEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEV
         +VL Q   D+ L++FKT+ RGYIYVRLDKLS EYGCP+++ELE +S+E+KKRLD+ GA   IP+DLALEV
Subjt:  HEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEV

AT1G77122.1 Uncharacterised protein family UPF00907.0e-4541.23Show/hide
Query:  DEVKEHNPLQYGRDEGEETTDGWEEDDDLEPEL--GDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLE
        +E++E+       DE +E  D   E D+ E EL  GDGGGGGG+ L G  W +  LALA +V   F  D+ +Y+FKT     I VR+++L+N++G P++E
Subjt:  DEVKEHNPLQYGRDEGEETTDGWEEDDDLEPEL--GDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLE

Query:  ELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSK
        ++E++S  Y+ +L E     +IPD+++LEVSSPG ER++++P DL R+K  PM V Y    E   TE DG+F +   D+E++ C+W +A+++ NR+   K
Subjt:  ELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSK

Query:  GRPLTRKQKDWRLKLPFGNHKKVFLYLE
        GRPL++KQ++WRL+  F + + V L+ E
Subjt:  GRPLTRKQKDWRLKLPFGNHKKVFLYLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGTAGCAGGATTGCTCGTACTTTGCTTCATCGAGCTCGAAGGCCCGCCGCTTTCTCTTCATTTTCCTCCGCCGGAAGGCCGTCTTCTATAGTCTTTGGC
GCCGATGCAAGGTCTTCTCAAAGTTCTTGCTCCTCTTCCTCCGGTCATGTTCATTTCCGTCGCGAGCACGCATTCGCCTTTTCTCCTTCACCAACCGTACGCTTA
TTCAATACCAATTGCTCTAAAGAATTTGAAGATGAAGTAAAAGAGCACAATCCACTTCAATACGGGAGGGATGAAGGGGAAGAAACTACGGATGGATGGGAAGAA
GACGATGATCTGGAGCCTGAGCTTGGTGATGGAGGGGGTGGTGGTGGTGTTGTTTTGCAAGGCGTTCCATGGGGTGAACGCGTTCTTGCTCTTGCTCACGAGGTC
TTGCTGCAATTTGGCGATGACATAATACTCTATTCTTTTAAGACTACTCTACGTGGATATATTTATGTCAGATTAGACAAGCTCTCAAACGAATATGGGTGTCCC
AGCTTGGAGGAACTTGAAAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGGGCACTTGGAAATATTCCGGATGATTTAGCTCTTGAGGTATCATCT
CCAGGTGCAGAGAGATTACTCAAGGTCCCAGATGATCTGTTTAGATTTAAAGCCATGCCAATGCGAGTGTGCTATATAGAAGACGGAGAATCGAGAGGCACTGAG
AATGATGGAGTTTTTATGATGGATCATGTGGATTTGGAATCTGAGAGCTGTGTCTGGAAATTAGCAAATGTAAAGGAAAATCGAGATCCTTTGAGTAAAGGAAGA
CCTTTGACTCGTAAGCAGAAAGATTGGAGGTTAAAGTTACCCTTTGGAAATCATAAGAAGGTATTCCTTTATCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGTAGCAGGATTGCTCGTACTTTGCTTCATCGAGCTCGAAGGCCCGCCGCTTTCTCTTCATTTTCCTCCGCCGGAAGGCCGTCTTCTATAGTCTTTGGC
GCCGATGCAAGGTCTTCTCAAAGTTCTTGCTCCTCTTCCTCCGGTCATGTTCATTTCCGTCGCGAGCACGCATTCGCCTTTTCTCCTTCACCAACCGTACGCTTA
TTCAATACCAATTGCTCTAAAGAATTTGAAGATGAAGTAAAAGAGCACAATCCACTTCAATACGGGAGGGATGAAGGGGAAGAAACTACGGATGGATGGGAAGAA
GACGATGATCTGGAGCCTGAGCTTGGTGATGGAGGGGGTGGTGGTGGTGTTGTTTTGCAAGGCGTTCCATGGGGTGAACGCGTTCTTGCTCTTGCTCACGAGGTC
TTGCTGCAATTTGGCGATGACATAATACTCTATTCTTTTAAGACTACTCTACGTGGATATATTTATGTCAGATTAGACAAGCTCTCAAACGAATATGGGTGTCCC
AGCTTGGAGGAACTTGAAAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGGGCACTTGGAAATATTCCGGATGATTTAGCTCTTGAGGTATCATCT
CCAGGTGCAGAGAGATTACTCAAGGTCCCAGATGATCTGTTTAGATTTAAAGCCATGCCAATGCGAGTGTGCTATATAGAAGACGGAGAATCGAGAGGCACTGAG
AATGATGGAGTTTTTATGATGGATCATGTGGATTTGGAATCTGAGAGCTGTGTCTGGAAATTAGCAAATGTAAAGGAAAATCGAGATCCTTTGAGTAAAGGAAGA
CCTTTGACTCGTAAGCAGAAAGATTGGAGGTTAAAGTTACCCTTTGGAAATCATAAGAAGGTATTCCTTTATCTTGAATGATGAAAATTAGCACCTCAAGGTCCT
CAAGAAAGGACGGGTCTTCTGTGTGCTTTAATTCATGAGGTTACTGTTAGTTTTGCGTGGCATTATTTCTTTTTGAGGTCTTGGAGCTTTTGCCACTTGTACACT
TTCTTCTGTATGAAATTTGTTTCAGCAGGAGCATTATGTATTCATAGGATATTCTCCTTTTGGAATTGATATCTTTGTTAAGGA
Protein sequenceShow/hide protein sequence
MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAFAFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWEE
DDDLEPELGDGGGGGGVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSS
PGAERLLKVPDDLFRFKAMPMRVCYIEDGESRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKKVFLYLE