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Carg17318 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17318
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein BIG GRAIN 1-like E
Genome locationCarg_Chr18:10555350..10556018
RNA-Seq ExpressionCarg17318
SyntenyCarg17318
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR039621 - Protein BIG GRAIN 1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013094.1 Protein BIG GRAIN 1-like E, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-118100Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
        MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP

Query:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
        SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
Subjt:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD

Query:  VDQDARSDSSSDLFELRIYDFD
        VDQDARSDSSSDLFELRIYDFD
Subjt:  VDQDARSDSSSDLFELRIYDFD

XP_022945530.1 protein BIG GRAIN 1-like E [Cucurbita moschata]2.6e-11598.65Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
        MSAATHL GNP KIFHKPPHRRN STELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP

Query:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
        SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
Subjt:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD

Query:  VDQDARSDSSSDLFELRIYDFD
        VDQDARSDSSSDLFELRIYDFD
Subjt:  VDQDARSDSSSDLFELRIYDFD

XP_022968639.1 protein BIG GRAIN 1-like E [Cucurbita maxima]5.4e-11396.4Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
        MSAATHLPGNP KIFHKPPHRRNDSTELDVFEAARYFSGSNEL YTNTSSFTH II EDHS RRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP

Query:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
        SSPAGRLANFLNSLFNQSASQKKKKPKNG KNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYK+IRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
Subjt:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD

Query:  VDQDARSDSSSDLFELRIYDFD
        VD+DARSDSSSDLFELRIYDFD
Subjt:  VDQDARSDSSSDLFELRIYDFD

XP_023542013.1 protein BIG GRAIN 1-like E [Cucurbita pepo subsp. pepo]5.4e-11396.85Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
        MSAATHL GNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTH IIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP

Query:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
        SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYK+IRNLLDQTRP SKNLGNVKQNSD PTRKIKD
Subjt:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD

Query:  VDQDARSDSSSDLFELRIYDFD
        VD DA+SDSSSDLFELRIYDFD
Subjt:  VDQDARSDSSSDLFELRIYDFD

XP_038892897.1 protein BIG GRAIN 1-like E [Benincasa hispida]8.4e-6662.5Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYT-----NTSSFTHNIIREDHSSRRGGRMSLDLPLRTNA--APPPPYTAEKPPIK-
        MS   HL GNP K+F K  HRR DS ELDVFEAARYFSGSNEL YT      TS F+  I REDH  RRGGRMSLDLP+RTN    PPPPYTAEK  IK 
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYT-----NTSSFTHNIIREDHSSRRGGRMSLDLPLRTNA--APPPPYTAEKPPIK-

Query:  EKKHRQQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN-----------------ISAPNKNYKQIRNLLD
        +KK RQQPSSP GRLANFLNSLFNQS+S+KKKKPKN ++N++ H EIG +KRRSSLS+LIDSK SSN                 +  P+KNYK+IR+ LD
Subjt:  EKKHRQQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN-----------------ISAPNKNYKQIRNLLD

Query:  QTRPA--SKNLGN-VKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYD
        Q R A  SKNLGN + +      RKI D D+   SDSSSDLFELRIYD
Subjt:  QTRPA--SKNLGN-VKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYD

TrEMBL top hitse value%identityAlignment
A0A0A0KSX8 Uncharacterized protein1.7e-5958.78Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNA--APPPPYTAEKPPIKE-KKHR
        MS  +HL G+P KIF K  HRR DS ELDVFEAARYF+GSNE  YT  +++  ++    H  RRGGRMSLDLPLRTN    P PPYTAEK  +K+ KKHR
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNA--APPPPYTAEKPPIKE-KKHR

Query:  QQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN------------------ISAPNKNYKQIRNLLDQTRP
        QQPSSP GRLANFLNSLFNQSAS+KKKKPKN +K ++ HHE+GARKRRSSLS+LID+KSSS+                  +  PNKNY +IR+ LDQ R 
Subjt:  QQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN------------------ISAPNKNYKQIRNLLDQTRP

Query:  A----SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYD
             SK  G   Q S+   RK+ D D+   SDSSSDLFELRI D
Subjt:  A----SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYD

A0A5D3CB02 Protein BIG GRAIN 1-like E9.1e-5858.37Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNA--APPPPYTAEKPPIKE-KKHR
        MS  +HL G+P KIF K  HRR DS ELDVFEAA YFSGSNE    NT++     +   H  RRGGRMSLDLPLRTN    PPPPYTAEK  IK+ KKHR
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNA--APPPPYTAEKPPIKE-KKHR

Query:  QQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN------------------ISAPNKNYKQIRNLLDQTRP
        QQPSSP GRLANFLNSLFNQS S+KKKKPKN +K ++ HHEIGARKRRSSLS+LID+KSSSN                  +  P+K Y +IR+ LDQ R 
Subjt:  QQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN------------------ISAPNKNYKQIRNLLDQTRP

Query:  ----ASKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYD
            + KN      N     RK+ D D+   SDSSSDLFELRI D
Subjt:  ----ASKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYD

A0A6J1D6V3 protein BIG GRAIN 1-like E5.1e-6160.39Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRG-GRMSLDLPLRTNAA--PPPPYTAEKPPIKEKKHR
        MS  +HL  NP KIF K  HRRN+S ELDVFEAARYFSG NE+ YT    +   I REDH  RRG GRMSLDLP+RTN    PPPPYTAEK  IKEKKHR
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRG-GRMSLDLPLRTNAA--PPPPYTAEKPPIKEKKHR

Query:  QQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNIS---------------APNKNYKQIRNLLDQTRPASK
        QQPSSP GRLANFLNSLFNQSAS+KKKKPKN +K+++       RKRRSSLS+LIDSKSSSN S                PNKNYK+IR LL     ++ 
Subjt:  QQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNIS---------------APNKNYKQIRNLLDQTRPASK

Query:  NLG-----------NVKQNSD----HPTRKIKDVDQDARSDSSSDLFELRIYDFD
        NLG           N KQNSD    +  RKI  +D+ A SDSSSDLFELRI DFD
Subjt:  NLG-----------NVKQNSD----HPTRKIKDVDQDARSDSSSDLFELRIYDFD

A0A6J1G172 protein BIG GRAIN 1-like E1.2e-11598.65Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
        MSAATHL GNP KIFHKPPHRRN STELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP

Query:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
        SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
Subjt:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD

Query:  VDQDARSDSSSDLFELRIYDFD
        VDQDARSDSSSDLFELRIYDFD
Subjt:  VDQDARSDSSSDLFELRIYDFD

A0A6J1I085 protein BIG GRAIN 1-like E2.6e-11396.4Show/hide
Query:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
        MSAATHLPGNP KIFHKPPHRRNDSTELDVFEAARYFSGSNEL YTNTSSFTH II EDHS RRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP
Subjt:  MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQP

Query:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
        SSPAGRLANFLNSLFNQSASQKKKKPKNG KNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYK+IRNLLDQTRPASKNLGNVKQNSDHPTRKIKD
Subjt:  SSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKD

Query:  VDQDARSDSSSDLFELRIYDFD
        VD+DARSDSSSDLFELRIYDFD
Subjt:  VDQDARSDSSSDLFELRIYDFD

SwissProt top hitse value%identityAlignment
Q93Z37 Protein BIG GRAIN 1-like E1.7e-1332.74Show/hide
Query:  HRRNDSTELDVFEAARYFSGSNELI---YTNTSSFTHNIIREDHSSR-----RGGRMSLDLPLRTNAA---------PPPPYTAEKPPIKEKKHRQQPSS
        H+RN S ELDVFEAA YF G NE     + +T  + +N  RE++  R      G R+SLDLP+R +                T  K  +   +H+ QPSS
Subjt:  HRRNDSTELDVFEAARYFSGSNELI---YTNTSSFTHNIIREDHSSR-----RGGRMSLDLPLRTNAA---------PPPPYTAEKPPIKEKKHRQQPSS

Query:  PAGRLANFLNSLFNQSASQK---KKKPKNGMKNDEFHHEIGA-----RKRRSSLS----------------------SLIDSKSSS------NISAPNKN
        P G++A+FLNSLF+Q+ S+K   K K K    + E   EI       R+RRSS+S                      SLI S SS        ++ P KN
Subjt:  PAGRLANFLNSLFNQSASQK---KKKPKNGMKNDEFHHEIGA-----RKRRSSLS----------------------SLIDSKSSS------NISAPNKN

Query:  YKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIK----------------DVDQDAR-----------SDSSSDLFELRIYD
        YKQ  N    T+   +      +       K+K                D+D D R           SDSSSDLFEL+ Y+
Subjt:  YKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIK----------------DVDQDAR-----------SDSSSDLFELRIYD

Arabidopsis top hitse value%identityAlignment
AT1G69160.1 unknown protein1.2e-1432.74Show/hide
Query:  HRRNDSTELDVFEAARYFSGSNELI---YTNTSSFTHNIIREDHSSR-----RGGRMSLDLPLRTNAA---------PPPPYTAEKPPIKEKKHRQQPSS
        H+RN S ELDVFEAA YF G NE     + +T  + +N  RE++  R      G R+SLDLP+R +                T  K  +   +H+ QPSS
Subjt:  HRRNDSTELDVFEAARYFSGSNELI---YTNTSSFTHNIIREDHSSR-----RGGRMSLDLPLRTNAA---------PPPPYTAEKPPIKEKKHRQQPSS

Query:  PAGRLANFLNSLFNQSASQK---KKKPKNGMKNDEFHHEIGA-----RKRRSSLS----------------------SLIDSKSSS------NISAPNKN
        P G++A+FLNSLF+Q+ S+K   K K K    + E   EI       R+RRSS+S                      SLI S SS        ++ P KN
Subjt:  PAGRLANFLNSLFNQSASQK---KKKPKNGMKNDEFHHEIGA-----RKRRSSLS----------------------SLIDSKSSS------NISAPNKN

Query:  YKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIK----------------DVDQDAR-----------SDSSSDLFELRIYD
        YKQ  N    T+   +      +       K+K                D+D D R           SDSSSDLFEL+ Y+
Subjt:  YKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIK----------------DVDQDAR-----------SDSSSDLFELRIYD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCCGCCACCCACCTCCCCGGCAACCCAGCTAAGATCTTCCACAAACCACCACACCGGCGGAACGATTCCACCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTT
CTCCGGTAGCAACGAACTCATTTACACCAACACTTCATCATTCACTCACAATATCATCAGAGAGGATCACAGCAGCCGGAGAGGCGGAAGAATGAGCCTCGACTTGCCGT
TAAGAACCAATGCAGCTCCACCGCCGCCGTACACGGCGGAGAAGCCACCAATCAAAGAGAAAAAACACCGGCAACAACCCAGCTCCCCGGCTGGTCGGCTCGCCAATTTC
CTCAATTCCCTCTTCAACCAATCAGCTTCTCAAAAGAAAAAGAAACCCAAAAATGGCATGAAAAACGATGAATTTCATCACGAAATTGGAGCAAGAAAGAGAAGAAGCAG
CTTAAGTTCGCTCATCGATTCAAAATCATCTTCAAACATCTCAGCTCCCAACAAAAATTACAAGCAAATCAGAAACCTTTTGGATCAGACACGACCAGCTTCCAAGAATC
TCGGAAATGTTAAGCAAAATTCTGATCACCCGACCAGAAAAATCAAAGATGTCGACCAAGATGCTCGAAGTGATTCAAGTTCCGATCTTTTTGAGCTACGAATCTACGAC
TTCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGCCGCCACCCACCTCCCCGGCAACCCAGCTAAGATCTTCCACAAACCACCACACCGGCGGAACGATTCCACCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTT
CTCCGGTAGCAACGAACTCATTTACACCAACACTTCATCATTCACTCACAATATCATCAGAGAGGATCACAGCAGCCGGAGAGGCGGAAGAATGAGCCTCGACTTGCCGT
TAAGAACCAATGCAGCTCCACCGCCGCCGTACACGGCGGAGAAGCCACCAATCAAAGAGAAAAAACACCGGCAACAACCCAGCTCCCCGGCTGGTCGGCTCGCCAATTTC
CTCAATTCCCTCTTCAACCAATCAGCTTCTCAAAAGAAAAAGAAACCCAAAAATGGCATGAAAAACGATGAATTTCATCACGAAATTGGAGCAAGAAAGAGAAGAAGCAG
CTTAAGTTCGCTCATCGATTCAAAATCATCTTCAAACATCTCAGCTCCCAACAAAAATTACAAGCAAATCAGAAACCTTTTGGATCAGACACGACCAGCTTCCAAGAATC
TCGGAAATGTTAAGCAAAATTCTGATCACCCGACCAGAAAAATCAAAGATGTCGACCAAGATGCTCGAAGTGATTCAAGTTCCGATCTTTTTGAGCTACGAATCTACGAC
TTCGATTGA
Protein sequenceShow/hide protein sequence
MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANF
LNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYD
FD