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Carg17333 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17333
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNodulin MtN3 family protein
Genome locationCarg_Chr06:9283617..9284242
RNA-Seq ExpressionCarg17333
SyntenyCarg17333
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028989.1 hypothetical protein SDJN02_10172 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-63100Show/hide
Query:  MAELSFFVGVIGNVISVLMFLSPRNILADYKEEIDGGVRELSVRVHLAELFSLDLLRCYQAWSLPRSHRKFLWRCCTVFLPRRFPHLRTVGNEGQLLNFK
        MAELSFFVGVIGNVISVLMFLSPRNILADYKEEIDGGVRELSVRVHLAELFSLDLLRCYQAWSLPRSHRKFLWRCCTVFLPRRFPHLRTVGNEGQLLNFK
Subjt:  MAELSFFVGVIGNVISVLMFLSPRNILADYKEEIDGGVRELSVRVHLAELFSLDLLRCYQAWSLPRSHRKFLWRCCTVFLPRRFPHLRTVGNEGQLLNFK

Query:  IFSQYLCDYSEKLRSIHRLMD
        IFSQYLCDYSEKLRSIHRLMD
Subjt:  IFSQYLCDYSEKLRSIHRLMD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G16690.1 Nodulin MtN3 family protein4.1e-0486.96Show/hide
Query:  MAELSFFVGVIGNVISVLMFLSP
        MA+LSF+VGVIGNVISVL+FLSP
Subjt:  MAELSFFVGVIGNVISVLMFLSP
AT4G15920.1 Nodulin MtN3 family protein9.0e-0482.61Show/hide
Query:  MAELSFFVGVIGNVISVLMFLSP
        MAE SF++GVIGNVISVL+FLSP
Subjt:  MAELSFFVGVIGNVISVLMFLSP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAACTCAGCTTCTTCGTCGGCGTAATAGGCAACGTCATCTCCGTTCTTATGTTCCTTTCTCCGCGGAACATTCTGGCGGATTATAAAGAAGAAATCGACGGAGG
AGTTCGAGAGCTTTCCGTACGTGTGCACTTGGCTGAACTCTTCTCTCTGGACTTACTACGGTGTTATCAAGCCTGGAGCCTACCTCGTAGCCACCGTAAATTCCTTTGGC
GTTGTTGTACAGTCTTTCTTCCTCGGCGTTTTCCTCATCTACGCACCGTCGGCAATGAAGGTCAGTTGTTGAACTTCAAGATATTTAGTCAATATTTATGCGATTACTCT
GAGAAACTGAGATCGATCCATCGATTGATGGATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAGCCATGAGAACCACAAGCACACAGCTTATTATTAAAGGTACCTCATCGTTCTCACCTGCAGACCACATCATTTCTTCTCTCAACAAGCAACCATGGCGGAA
CTCAGCTTCTTCGTCGGCGTAATAGGCAACGTCATCTCCGTTCTTATGTTCCTTTCTCCGCGGAACATTCTGGCGGATTATAAAGAAGAAATCGACGGAGGAGTTCGAGA
GCTTTCCGTACGTGTGCACTTGGCTGAACTCTTCTCTCTGGACTTACTACGGTGTTATCAAGCCTGGAGCCTACCTCGTAGCCACCGTAAATTCCTTTGGCGTTGTTGTA
CAGTCTTTCTTCCTCGGCGTTTTCCTCATCTACGCACCGTCGGCAATGAAGGTCAGTTGTTGAACTTCAAGATATTTAGTCAATATTTATGCGATTACTCTGAGAAACTG
AGATCGATCCATCGATTGATGGATTGA
Protein sequenceShow/hide protein sequence
MAELSFFVGVIGNVISVLMFLSPRNILADYKEEIDGGVRELSVRVHLAELFSLDLLRCYQAWSLPRSHRKFLWRCCTVFLPRRFPHLRTVGNEGQLLNFKIFSQYLCDYS
EKLRSIHRLMD