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Carg17334 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17334
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBidirectional sugar transporter SWEET
Genome locationCarg_Chr06:9282080..9283576
RNA-Seq ExpressionCarg17334
SyntenyCarg17334
Gene Ontology termsGO:0008643 - carbohydrate transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597531.1 Bidirectional sugar transporter SWEET17, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4270.27Show/hide
Query:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI
        +TKTGIMVGILDIGF ATAIVVSQLLLDGETR+GALGFVCAGLNIIMYGSPLS+M                                        VPNGI
Subjt:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI

Query:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
        GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
Subjt:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP

KAG7028988.1 hypothetical protein SDJN02_10171, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-54100Show/hide
Query:  MCVSVVNFQTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIMVPNGIGLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQE
        MCVSVVNFQTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIMVPNGIGLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQE
Subjt:  MCVSVVNFQTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIMVPNGIGLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQE

Query:  QDSQTQPLISSSNPEP
        QDSQTQPLISSSNPEP
Subjt:  QDSQTQPLISSSNPEP

XP_022937945.1 bidirectional sugar transporter SWEET16 [Cucurbita moschata]8.9e-4371.62Show/hide
Query:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI
        +TKTGIMVGILDIGFLATAIVVSQLLLDGETR+GALGFVCAGLNIIMYGSPLSIM                                        VPNGI
Subjt:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI

Query:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
        GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
Subjt:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP

XP_023522068.1 bidirectional sugar transporter SWEET17-like [Cucurbita pepo subsp. pepo]3.2e-4068.24Show/hide
Query:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI
        + KTGIMVGILDIGF ATAIVVSQL+LDGETR+GALGFVCAGLNIIMYGSPLS+M                                        VPNGI
Subjt:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI

Query:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
        GLGLGLAQIAIYGVYRNAKPLPLKTSI TQQEQDSQTQPLISSSNPEP
Subjt:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP

XP_023539111.1 bidirectional sugar transporter SWEET16-like [Cucurbita pepo subsp. pepo]1.4e-4068.92Show/hide
Query:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI
        + KTGIMVGILDIGF ATAIVVSQLLLDGETR+GALGFVCAGLNIIMYGSPLS+M                                        VPNGI
Subjt:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI

Query:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
        GLGLGLAQIAIYGVYRNAKPLPLKTSI TQQEQDSQTQPLISSSNPEP
Subjt:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP

TrEMBL top hitse value%identityAlignment
A0A0A0L599 Bidirectional sugar transporter SWEET1.1e-2552.98Show/hide
Query:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI
        + KTGIMVGILDIG L  AIVVS+L+L+GE R+ ALGFVCAGLNI+MY SPLS+M                                        VPNG+
Subjt:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI

Query:  GLGLGLAQIAIYGVYRNA-KP-LPLKTSIPTQQEQ-DSQTQPLISSSNPEP
        GLGLGL Q+ +Y +YRNA KP LPL TSI T Q+Q DSQTQPLISS +P+P
Subjt:  GLGLGLAQIAIYGVYRNA-KP-LPLKTSIPTQQEQ-DSQTQPLISSSNPEP

A0A5D3CWA5 Bidirectional sugar transporter SWEET6.9e-2552.63Show/hide
Query:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI
        + KTGI+VGILDIG L  AIVVS+L+L+GE R+ ALGFVCAGLNI+MY SPLSIM                                        VPNG+
Subjt:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI

Query:  GLGLGLAQIAIYGVYRNA-KP-LPLKTSIPTQQEQ--DSQTQPLISSSNPEP
        GL LGL Q+ +Y +YRNA KP LPL TSI T Q+Q  DSQTQPLISSS+P+P
Subjt:  GLGLGLAQIAIYGVYRNA-KP-LPLKTSIPTQQEQ--DSQTQPLISSSNPEP

A0A6J1CA77 Bidirectional sugar transporter SWEET1.1e-2554Show/hide
Query:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI
        +TKTGI+VGILDIGFL TAIVVSQ  L  ETR+GALGFVCAGLNIIMY SPLS+M                                        VPNG+
Subjt:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI

Query:  GLGLGLAQIAIYGVYRNAKP-LPLKTSIPTQQEQDSQTQPL-ISSSNPEP
        GLGLGLA++ +YG+YRNAKP LPLK+S  T  E+D  TQPL ISSS  +P
Subjt:  GLGLGLAQIAIYGVYRNAKP-LPLKTSIPTQQEQDSQTQPL-ISSSNPEP

A0A6J1FI87 Bidirectional sugar transporter SWEET4.3e-4371.62Show/hide
Query:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI
        +TKTGIMVGILDIGFLATAIVVSQLLLDGETR+GALGFVCAGLNIIMYGSPLSIM                                        VPNGI
Subjt:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI

Query:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
        GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
Subjt:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP

A0A6J1I9M2 Bidirectional sugar transporter SWEET2.0e-4068.24Show/hide
Query:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI
        +TKTGIMVGILDIGF ATAIVVSQLLL GETR+GALG VCAGLNIIMYGSPLS+M                                        VPNGI
Subjt:  QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGI

Query:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
        GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISS NPEP
Subjt:  GLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP

SwissProt top hitse value%identityAlignment
P0DKJ5 Bidirectional sugar transporter SWEET155.9e-0524.58Show/hide
Query:  LDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGIGLGLGLAQIA
        L++G  +  +V+ Q LL G  R+   G++CA  ++ ++ +PLSI+                                        +PN +G+ LGL Q+ 
Subjt:  LDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----------------------------------------VPNGIGLGLGLAQIA

Query:  IYGVYRNAKPLPLKTSIP
        +YG YRNA    ++  +P
Subjt:  IYGVYRNAKPLPLKTSIP

Q84WN3 Bidirectional sugar transporter SWEET171.9e-0830.67Show/hide
Query:  NFQTKTGIMVGILDIGFLATAIVVSQLLLDGE-TRVGALGFVCAGLNIIMYGSPLS----------------------------------------IMVP
        + + KT  +  +L++ F   AIV ++   + E  R  ++GF+ AGLNIIMYGSPLS                                        ++VP
Subjt:  NFQTKTGIMVGILDIGFLATAIVVSQLLLDGE-TRVGALGFVCAGLNIIMYGSPLS----------------------------------------IMVP

Query:  NGIGLGLGLAQIAIYGVYRNAKPLPLKTSIP--TQQEQD---SQTQPLIS
        NG+G   G  Q+ +YG+YRNAKP+ L   +    Q E++   S+ +PL+S
Subjt:  NGIGLGLGLAQIAIYGVYRNAKPLPLKTSIP--TQQEQD---SQTQPLIS

Q9LUR4 Bidirectional sugar transporter SWEET165.7e-0833.33Show/hide
Query:  KTGIMVGILDIGFLATAIVVSQLLL-DGETRVGALGFVCAGLNIIMYGSPLS----------------------------------------IMVPNGIG
        KT ++V  L++ F   AI  ++ L  D  +R  ++GF+CA LNIIMYGSPLS                                        ++VPNG+G
Subjt:  KTGIMVGILDIGFLATAIVVSQLLL-DGETRVGALGFVCAGLNIIMYGSPLS----------------------------------------IMVPNGIG

Query:  LGLGLAQIAIYGVYRNAKPL
          LG+ Q+ IY  YRNA+P+
Subjt:  LGLGLAQIAIYGVYRNAKPL

Arabidopsis top hitse value%identityAlignment
AT3G16690.1 Nodulin MtN3 family protein4.0e-0933.33Show/hide
Query:  KTGIMVGILDIGFLATAIVVSQLLL-DGETRVGALGFVCAGLNIIMYGSPLS----------------------------------------IMVPNGIG
        KT ++V  L++ F   AI  ++ L  D  +R  ++GF+CA LNIIMYGSPLS                                        ++VPNG+G
Subjt:  KTGIMVGILDIGFLATAIVVSQLLL-DGETRVGALGFVCAGLNIIMYGSPLS----------------------------------------IMVPNGIG

Query:  LGLGLAQIAIYGVYRNAKPL
          LG+ Q+ IY  YRNA+P+
Subjt:  LGLGLAQIAIYGVYRNAKPL

AT4G15920.1 Nodulin MtN3 family protein1.1e-0930.67Show/hide
Query:  NFQTKTGIMVGILDIGFLATAIVVSQLLLDGE-TRVGALGFVCAGLNIIMYGSPLS----------------------------------------IMVP
        + + KT  +  +L++ F   AIV ++   + E  R  ++GF+ AGLNIIMYGSPLS                                        ++VP
Subjt:  NFQTKTGIMVGILDIGFLATAIVVSQLLLDGE-TRVGALGFVCAGLNIIMYGSPLS----------------------------------------IMVP

Query:  NGIGLGLGLAQIAIYGVYRNAKPLPLKTSIP--TQQEQD---SQTQPLIS
        NG+G   G  Q+ +YG+YRNAKP+ L   +    Q E++   S+ +PL+S
Subjt:  NGIGLGLGLAQIAIYGVYRNAKPLPLKTSIP--TQQEQD---SQTQPLIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTGTCGGTTGTGAATTTTCAGACGAAGACTGGAATTATGGTAGGGATTCTGGATATCGGCTTCCTTGCGACTGCGATTGTGGTGAGTCAATTACTGTTAGACGG
TGAAACGCGTGTTGGAGCCCTAGGGTTTGTTTGTGCAGGCCTTAATATCATTATGTACGGCTCGCCGCTCTCTATCATGGTTCCAAATGGGATAGGATTAGGGTTGGGAT
TAGCACAGATTGCTATCTATGGAGTTTACAGAAATGCCAAGCCACTGCCATTGAAGACCTCAATCCCAACTCAACAAGAACAAGACTCGCAAACCCAACCCCTCATTTCT
TCTTCAAATCCCGAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTGTCGGTTGTGAATTTTCAGACGAAGACTGGAATTATGGTAGGGATTCTGGATATCGGCTTCCTTGCGACTGCGATTGTGGTGAGTCAATTACTGTTAGACGG
TGAAACGCGTGTTGGAGCCCTAGGGTTTGTTTGTGCAGGCCTTAATATCATTATGTACGGCTCGCCGCTCTCTATCATGGTTCCAAATGGGATAGGATTAGGGTTGGGAT
TAGCACAGATTGCTATCTATGGAGTTTACAGAAATGCCAAGCCACTGCCATTGAAGACCTCAATCCCAACTCAACAAGAACAAGACTCGCAAACCCAACCCCTCATTTCT
TCTTCAAATCCCGAACCCTAATTTCGGGTCATCTCTTCTTTCATCGATATAATTCTTTTTTGTTGAAGAATTTTGAGTTTGTTTTATGCATATTTTGATTGTTTTTGAAG
GCTGTAAGTCATCATGAAACATTAGGTGTCCATACATGTATGCGTTATATACCTACCATGGTTAAATCCTTTTCGTATCAATCACTTGTTTACTATCTAAGTTCATCAAC
GAGTAAGTTACCAAATTTAGACAAGTTTGTAATGGCTATCAACTCCAATGCCGCAGAAGCCCGAAAGATCTGAGCCCATAGCTGAGCCCAGCCCAGCACGTCCTCCAAAT
CTGTTCAGTATACGCAGCATGTGGCCCACGTGAGCATTGGAATCTTGCTATTACAACAATAAATTAAATAATTCTAGCATATTAAAATTTTTATATTACTTATAACCCTT
AGTTCGTACCAGGTGTGACATTATATTCAAAGAAATTTTTAAGAACCGAAAATTTTATCTAAACATGAGACTTCTATGAATCATTGA
Protein sequenceShow/hide protein sequence
MCVSVVNFQTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIMVPNGIGLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLIS
SSNPEP