CuGenDBv2

Gene ID	Carg17337
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC103483850
Genome location	Carg_Chr06:9273379..9273735
RNA-Seq Expression	Carg17337
Synteny	Carg17337
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134216.1 uncharacterized protein LOC101205160 [Cucumis sativus]

2.0e-50

94.96

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI
        MIEERQGGAPH +LLAVVVAIVIV PFLLGD GEALT+AISDLLSPFGLLLLPILLLL IQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_022137815.1 uncharacterized protein LOC111009160 [Momordica charantia]

1.3e-49

90.76

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI
        MIEERQGGAPHG+LLAVVVA+VIV PF+ GD GEA+TEAISDLLSPFGLLLLP++LLLAIQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_022937994.1 uncharacterized protein LOC111444213 [Cucurbita moschata]

1.8e-54

100

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
        MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL

Query:  FLLYNRISIFGGDDDSGD
        FLLYNRISIFGGDDDSGD
Subjt:  FLLYNRISIFGGDDDSGD

XP_022973719.1 uncharacterized protein LOC111472296 [Cucurbita maxima]

8.7e-54

99.15

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
        MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL

Query:  FLLYNRISIFGGDDDSGD
        FLLYNRISIFGGDDDS D
Subjt:  FLLYNRISIFGGDDDSGD

XP_038899735.1 uncharacterized protein LOC120086972 [Benincasa hispida]

4.5e-50

94.96

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI
        MIEERQGGAPH +LLAVVVAIVIV PFLLGD GEALTEAISDLLSP GLLLLPILLLL IQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5U0 Uncharacterized protein

9.7e-51

94.96

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI
        MIEERQGGAPH +LLAVVVAIVIV PFLLGD GEALT+AISDLLSPFGLLLLPILLLL IQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A5A7U157 Uncharacterized protein

9.7e-51

94.96

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI
        MIEERQGGAPH +LLAVVVAIVIV PFLLGD GEALT+AISDLLSPFGLLLLPILLLL IQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A6J1FCS5 uncharacterized protein LOC111444213

8.5e-55

100

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
        MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL

Query:  FLLYNRISIFGGDDDSGD
        FLLYNRISIFGGDDDSGD
Subjt:  FLLYNRISIFGGDDDSGD

A0A6J1I8A7 uncharacterized protein LOC111472294

8.5e-55

100

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
        MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL

Query:  FLLYNRISIFGGDDDSGD
        FLLYNRISIFGGDDDSGD
Subjt:  FLLYNRISIFGGDDDSGD

A0A6J1IFG7 uncharacterized protein LOC111472296

4.2e-54

99.15

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
        MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLIL

Query:  FLLYNRISIFGGDDDSGD
        FLLYNRISIFGGDDDS D
Subjt:  FLLYNRISIFGGDDDSGD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G31940.1 unknown protein

1.4e-04

30.56

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Query:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLS---PFGLLLLPILLLLAIQFLSSDR--GSFVSAIFSSGEPDSIHRVTGSPVGVALF
        M  +++G  P  + L V V I+++  F+     A  E + +  +      L+  P+LLLLA+ FLS D+  G  ++++    E +S++R  G+P GVA  
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLS---PFGLLLLPILLLLAIQFLSSDR--GSFVSAIFSSGEPDSIHRVTGSPVGVALF

Query:  LVLILFLL
        LV + F++
Subjt:  LVLILFLL

AT3G06890.1 unknown protein

2.1e-42

77.88

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Query:  GGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYN
        G APHG++LAVVVA+V++ PF +GD GEA+T+AI++LLSP GLLLLPI+LLL IQFLSS+RGSFVSAIFS+GEP+SIHRV+GSPVGVALFLVLILFLLY 
Subjt:  GGAPHGVLLAVVVAIVIVGPFLLGD-GEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYN

Query:  RISIFGGDDDSGD
        R SIFGGDD S D
Subjt:  RISIFGGDDDSGD

Sequences

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CDS sequence

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ATGATTGAAGAACGGCAAGGCGGAGCTCCCCACGGTGTTTTACTGGCGGTGGTCGTCGCCATCGTCATCGTTGGCCCCTTCCTCCTCGGCGACGGGGAGGCTCTTACCGA
AGCCATTTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTCCCCATCCTCCTCCTTCTCGCCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCT
TCTCCTCCGGCGAGCCTGACTCCATCCACCGAGTCACTGGTTCCCCCGTCGGCGTCGCTCTCTTCCTCGTCCTCATTCTCTTCCTCCTCTACAATCGGATTTCGATCTTC
GGCGGCGACGATGATTCCGGCGACTGA

mRNA sequence

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Protein sequence

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MIEERQGGAPHGVLLAVVVAIVIVGPFLLGDGEALTEAISDLLSPFGLLLLPILLLLAIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIF
GGDDDSGD

Carg17337 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome