CuGenDBv2

Gene ID	Carg17343
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	translocator protein homolog
Genome location	Carg_Chr06:9245343..9245858
RNA-Seq Expression	Carg17343
Synteny	Carg17343
Gene Ontology terms	GO:0018216 - peptidyl-arginine methylation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	IPR004307 - TspO/MBR-related protein IPR038330 - TspO/MBR-related superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597521.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]

6.4e-90

100

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Query:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
        MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
Subjt:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI

Query:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
Subjt:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

XP_022945022.1 translocator protein homolog [Cucurbita moschata]

6.4e-90

100

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Query:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
        MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
Subjt:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI

Query:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
Subjt:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]

1.2e-88

98.83

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Query:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
        MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
Subjt:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI

Query:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        AHLSLSVVWNPLVLVIRA LLAFLFCVLD VTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
Subjt:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]

4.2e-89

99.42

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Query:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
        MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
Subjt:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI

Query:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        AHLSLSVVWNPLVLVIRA LLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
Subjt:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

XP_038878873.1 translocator protein homolog [Benincasa hispida]

6.4e-82

92.35

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Query:  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRS+RHFPNRNRPIW+ PLWLLHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        HLSLSVVWNPLVLVIR+ +LAFLFCVLD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  HLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L583 Uncharacterized protein

4.7e-78

87.06

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Query:  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIP++LTIA IFLFGRSSRH+PNRNRPIW+ PLWL+ LSSI SSFL+GLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        HLSLSVVWNPLVLVIR+ ++AFLFCVLD VTL+ACY  FKRVNPFAKDL+KPCLAWTAYL AVTYVFIDL
Subjt:  HLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

A0A1S4DTF2 translocator protein homolog

3.6e-78

87.65

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Query:  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIP++LTIAVIFLFGRSSRHFPNRNRPIW+ PLWLL LSSI SSFL+GLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        HLSLSVVW+PLVLVIR+ ++AFLFCVLD VTL+ACYR F+RVNPFAKDL+KPCLAWTAYL AVTYVFI L
Subjt:  HLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

A0A5D3CWC4 Translocator protein-like protein

3.6e-78

87.65

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Query:  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIP++LTIAVIFLFGRSSRHFPNRNRPIW+ PLWLL LSSI SSFL+GLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        HLSLSVVW+PLVLVIR+ ++AFLFCVLD VTL+ACYR F+RVNPFAKDL+KPCLAWTAYL AVTYVFI L
Subjt:  HLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

A0A6J1FZS9 translocator protein homolog

3.1e-90

100

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Query:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
        MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
Subjt:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI

Query:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
Subjt:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

A0A6J1ICB9 translocator protein homolog

5.9e-89

98.83

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Query:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
        MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI
Subjt:  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYI

Query:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
        AHLSLSVVWNPLVLVIRA LLAFLFCVLD VTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL
Subjt:  AHLSLSVVWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

SwissProt top hits

e value

%identity

Alignment

E2RDM9 Translocator protein 2

5.6e-04

30.34

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Query:  AVSVAIPLTLTIAVIFLF-GRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWAD-GGFHCGSNALPLYIAHLSLSVVWNPLVLVIRARL--L
        A+ VA+P    I V  L   R  R +    +P W  P  +L    I+  F++G A++LVW D GG      ALPL +  + L+V W  L+    A    L
Subjt:  AVSVAIPLTLTIAVIFLF-GRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWAD-GGFHCGSNALPLYIAHLSLSVVWNPLVLVIRARL--L

Query:  AFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTY
        A L  +L    + +    +  +N  A  L+ P LAW     ++ Y
Subjt:  AFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTY

O82245 Translocator protein homolog

7.8e-30

40.76

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSV
        K + + K   AKR L+SL V+VA P+ +T+   +  G S  +        W+ PLWLLH + ++SS L+GLAAWLVW DGGFH   NAL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSV

Query:  VWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAV
        VW+P+   + + +      +     L+ CY+ F  ++P A +L+KPCLAW A++ AV
Subjt:  VWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAV

Arabidopsis top hits

e value

%identity

Alignment

AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related

5.5e-31

40.76

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSV
        K + + K   AKR L+SL V+VA P+ +T+   +  G S  +        W+ PLWLLH + ++SS L+GLAAWLVW DGGFH   NAL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSV

Query:  VWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAV
        VW+P+   + + +      +     L+ CY+ F  ++P A +L+KPCLAW A++ AV
Subjt:  VWNPLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAV

Sequences

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CDS sequence

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ATGTCTTCCTCTCCGCCGTTCAAATCCAGACCGGAATCCAAATACACCAAGGCGAAAAGAGCTCTCCGATCCCTCGCCGTCTCCGTCGCCATTCCTCTCACCCTTACCAT
CGCCGTCATCTTCCTCTTCGGCCGCTCCTCCCGCCATTTCCCCAACCGCAACCGTCCGATTTGGGTGGCGCCGCTCTGGCTCCTCCATCTCTCGTCGATCAGCTCCTCTT
TCCTAATCGGCCTCGCCGCCTGGCTCGTTTGGGCCGATGGTGGCTTCCATTGCGGATCCAACGCTCTTCCGCTCTACATCGCGCATCTCTCGCTCAGTGTCGTTTGGAAT
CCTCTGGTGCTCGTGATTCGCGCTCGTCTGCTTGCGTTTCTGTTCTGTGTTTTGGATTTAGTTACTCTGTATGCTTGTTATCGGACCTTCAAGCGAGTGAATCCCTTCGC
TAAGGATCTGATTAAGCCTTGTTTGGCTTGGACTGCGTATCTCTGTGCTGTTACTTATGTGTTTATTGATCTTTGA

mRNA sequence

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Protein sequence

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MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAPLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWN
PLVLVIRARLLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL

Carg17343 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome