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Carg17347 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17347
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCAP-Gly domain-containing linker protein 1-like
Genome locationCarg_Chr06:9228903..9231043
RNA-Seq ExpressionCarg17347
SyntenyCarg17347
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597517.1 hypothetical protein SDJN03_10697, partial [Cucurbita argyrosperma subsp. sororia]3.5e-7499.36Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MANADSSTPSTPAP PTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
        DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
XP_022137849.1 uncharacterized protein LOC111009183 [Momordica charantia]2.9e-5279.75Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MA+ADS TPS PAP P SA+KENLTPIG KI ELNESRAEL  RIQFLKQDLQNWR KLD QVNTYRSELSELKKSLNVEVE LRTEF ELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGK-KDGLHGLTEGKGNEAEN
        DVT SLRNLG+QD S DN++T+ QHP+AESSDKE  D  + KDG H LTE KGNEAEN
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGK-KDGLHGLTEGKGNEAEN
XP_022948034.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita moschata]1.2e-74100Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
        DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
XP_022973788.1 uncharacterized protein LOC111472345 [Cucurbita maxima]1.8e-7095.54Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MANADSSTPSTPAP P SAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQV+TYRSELSELKKSLN+EVEQLRTEF+ELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
        DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTE KGNEAE+
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
XP_023539906.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo]6.5e-7398.09Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MA+ADSSTPSTPAP PTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
        DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNE EN
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
TrEMBL top hitse value%identityAlignment
A0A5D3D134 CAP-Gly domain-containing linker protein 1 isoform X22.6e-5180.89Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MA++DSSTPS   P P SAKKENLTPIG KI ELNESR+ELL+RIQ LKQDLQNWR KLDTQVNTYRSELSELKKSLNVEVE LRTEF+ELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
        DVTTSLRNLG+QD S D N+T+HQHP A S DKED DE KKD   GLTE KGNEAEN
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
A0A6J1C8F7 uncharacterized protein LOC1110091831.4e-5279.75Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MA+ADS TPS PAP P SA+KENLTPIG KI ELNESRAEL  RIQFLKQDLQNWR KLD QVNTYRSELSELKKSLNVEVE LRTEF ELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGK-KDGLHGLTEGKGNEAEN
        DVT SLRNLG+QD S DN++T+ QHP+AESSDKE  D  + KDG H LTE KGNEAEN
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGK-KDGLHGLTEGKGNEAEN
A0A6J1G8M8 CAP-Gly domain-containing linker protein 1-like5.8e-75100Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
        DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
A0A6J1IDF2 uncharacterized protein LOC1114723458.6e-7195.54Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MANADSSTPSTPAP P SAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQV+TYRSELSELKKSLN+EVEQLRTEF+ELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
        DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTE KGNEAE+
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
A0A6J1IY17 CAP-Gly domain-containing linker protein 11.8e-5280.89Show/hide
Query:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE
        MA+ADSS+PS PAP P SAK ENLTPIG KI ELNESRAELL+RIQ LKQDLQNWR KLDTQVNTYRSELSELKKSLNVEVE LRTEF+ELRTTLQQQQE
Subjt:  MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQE

Query:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
        DVTTSLRNLG+QD S DNN+TRHQHP AE S+KED  E  K+G  G TE KGNEA N
Subjt:  DVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15790.1 unknown protein2.8e-2953.47Show/hide
Query:  ADSSTPSTPAPV--PTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQED
        +DS++P  P  V  PT+ KK+N  P+  K+ ELNESRAELL+RIQ LKQDLQ+WR KLDTQV  YR ELS LKK+LN+EVEQLR EF++L+TTL QQQ+D
Subjt:  ADSSTPSTPAPV--PTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQED

Query:  VTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLH
        V+ SL++LG+QD  +  +K        E  +    D+  K+  H
Subjt:  VTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACGCCGACTCTTCCACTCCCTCCACCCCTGCCCCCGTTCCTACATCAGCCAAGAAGGAGAATCTCACCCCCATTGGCTTGAAAATTATGGAATTGAACGAATC
AAGAGCAGAGCTGCTTGATAGAATTCAATTTCTTAAGCAGGATCTCCAGAATTGGAGGTTAAAGCTAGACACACAAGTTAATACCTACCGAAGTGAACTGTCTGAACTCA
AGAAATCGCTCAACGTTGAGGTGGAGCAACTTCGCACGGAATTCAGAGAACTAAGGACAACCCTTCAGCAGCAACAAGAAGATGTGACAACTAGCCTGAGGAACTTGGGT
GTTCAGGATGATTCTAAGGACAACAACAAGACTCGACATCAACATCCTGTAGCGGAAAGCAGCGACAAGGAAGACGAAGACGAGGGTAAGAAGGATGGACTCCATGGCTT
AACAGAGGGTAAGGGAAATGAAGCTGAAAATTAA
mRNA sequenceShow/hide mRNA sequence
GAGCGATTGGGTTTTGGTTAAAAATTCAAATCTTGGACAAAACTCGTCCCCATCTCTCCTCTCATTGTTCTTCTTTCTCCCCCTCAATTCCCTCAAATTTTGAATTTTGA
TCTCCATTTCACCCTCACCCACCCTTTTTAAAACCCTAATTTTTCAACTCATCAGATTCTGAATCTCCATTTCAGGCCGATTCGATCCCTGCTTCAATGGCGAACGCCGA
CTCTTCCACTCCCTCCACCCCTGCCCCCGTTCCTACATCAGCCAAGAAGGAGAATCTCACCCCCATTGGCTTGAAAATTATGGAATTGAACGAATCAAGAGCAGAGCTGC
TTGATAGAATTCAATTTCTTAAGCAGGATCTCCAGAATTGGAGGTTAAAGCTAGACACACAAGTTAATACCTACCGAAGTGAACTGTCTGAACTCAAGAAATCGCTCAAC
GTTGAGGTGGAGCAACTTCGCACGGAATTCAGAGAACTAAGGACAACCCTTCAGCAGCAACAAGAAGATGTGACAACTAGCCTGAGGAACTTGGGTGTTCAGGATGATTC
TAAGGACAACAACAAGACTCGACATCAACATCCTGTAGCGGAAAGCAGCGACAAGGAAGACGAAGACGAGGGTAAGAAGGATGGACTCCATGGCTTAACAGAGGGTAAGG
GAAATGAAGCTGAAAATTAAGAGAATTTCCATTGTGTTCGTAATGTGGCGATGGATTTCCACGTTTGACTGTTTTTCAAAGCTTTGTAATGGGATTGATAAGATTTTCCC
GGCATTTAAGGAAGCATTGAATTTGTAAGTGTAATTTTTTACACGCACATCAACATTAATAAGTTCATTCTTCAAGGATATATGTATTTAATTTTTGGGAAGCAGGGCTG
GTGGTATCGATTTTTTTCTCAACTAGCAAATTGGACTACTCAAAGGCTCCTATTTATATTCCTTTGTGGGTTCATA
Protein sequenceShow/hide protein sequence
MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQEDVTTSLRNLG
VQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN