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Carg17348 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17348
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationCarg_Chr06:9222100..9222818
RNA-Seq ExpressionCarg17348
SyntenyCarg17348
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028974.1 Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-78100Show/hide
Query:  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFSIISLSLSLRDVSFVPSAKL
        MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFSIISLSLSLRDVSFVPSAKL
Subjt:  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFSIISLSLSLRDVSFVPSAKL

Query:  PFIYMDPKARIPIKKRYLFIPPHIIISTGIFHPVWSGFPQGRTVRRMC
        PFIYMDPKARIPIKKRYLFIPPHIIISTGIFHPVWSGFPQGRTVRRMC
Subjt:  PFIYMDPKARIPIKKRYLFIPPHIIISTGIFHPVWSGFPQGRTVRRMC

XP_022948046.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]1.2e-3698.77Show/hide
Query:  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDF+
Subjt:  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS

XP_022956217.1 flowering-promoting factor 1-like protein 1 [Cucurbita moschata]3.1e-2471.43Show/hide
Query:  MSGVWVFDNGVIRLAEGGGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVFDNGVIRL E  G +       R VLIYT TNEAMT+  VLKNKL SLGWE+YYED+E++QFHKPSSVDLIS+PTDF+
Subjt:  MSGVWVFDNGVIRLAEGGGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS

XP_022979994.1 flowering-promoting factor 1-like protein 1 [Cucurbita maxima]2.4e-2472.94Show/hide
Query:  MSGVWVFDNGVIRLAEGGG----GSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVFDNGVIRL E  G    G+  R R VLIYT TNEAMT+ +VLKNKL SLGWE+YYED+E++QFHKPSSVDLIS+PTDF+
Subjt:  MSGVWVFDNGVIRLAEGGG----GSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS

XP_023528953.1 flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]1.5e-2369.05Show/hide
Query:  MSGVWVFDNGVIRLAEGGGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVFDNGVIRL E  G +       R VLIY  TNEAMT+  +LKNKL SLGWE+YYED+E++QFHKPSSVDLIS+PTDF+
Subjt:  MSGVWVFDNGVIRLAEGGGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS

TrEMBL top hitse value%identityAlignment
A0A6J1C9Z8 flowering-promoting factor 1-like protein 41.4e-2271.95Show/hide
Query:  MSGVWVF-DNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVF DNGVIRLA   G +R   R VL++T TNE MT+ TVLKNKL S+GWE+YYED+E+VQFHKPSSVDLISLP DF+
Subjt:  MSGVWVF-DNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS

A0A6J1G862 flowering-promoting factor 1-like protein 25.9e-3798.77Show/hide
Query:  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDF+
Subjt:  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS

A0A6J1GVQ4 flowering-promoting factor 1-like protein 11.5e-2471.43Show/hide
Query:  MSGVWVFDNGVIRLAEGGGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVFDNGVIRL E  G +       R VLIYT TNEAMT+  VLKNKL SLGWE+YYED+E++QFHKPSSVDLIS+PTDF+
Subjt:  MSGVWVFDNGVIRLAEGGGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS

A0A6J1IC95 flowering-promoting factor 1-like protein 25.9e-3798.77Show/hide
Query:  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDF+
Subjt:  MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS

A0A6J1IY48 flowering-promoting factor 1-like protein 11.2e-2472.94Show/hide
Query:  MSGVWVFDNGVIRLAEGGG----GSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVFDNGVIRL E  G    G+  R R VLIYT TNEAMT+ +VLKNKL SLGWE+YYED+E++QFHKPSSVDLIS+PTDF+
Subjt:  MSGVWVFDNGVIRLAEGGG----GSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFS

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 11.6e-1551.72Show/hide
Query:  MSGVWVFDNGVIRLAE----GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY--EDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVF NGVIRL E     G  ++NR R V++Y  T E +++ + L+  L SLGWE Y+   D +++QFHK SS+DLISLP DF+
Subjt:  MSGVWVFDNGVIRLAE----GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY--EDAEIVQFHKPSSVDLISLPTDFS

O24340 Flowering-promoting factor 11.9e-1651.69Show/hide
Query:  MSGVWVFDNGVIRLAEG---GGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY--EDAEIVQFHKPSSVDLISLPTDFSIIS
        MSGVWVF NGVIRL E     GG  N  R V++Y  T E +++ + L+  L SLGWE Y+   D +++QFHK SS+DLISLP DF+  S
Subjt:  MSGVWVFDNGVIRLAEG---GGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY--EDAEIVQFHKPSSVDLISLPTDFSIIS

Q8LR63 Flowering-promoting factor 1-like protein 23.0e-1445.19Show/hide
Query:  MSGVWVFDNGVIRLAE---------------GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYED--------AEIVQFHKPSSVDLISLP
        MSGVWVF NGV++L E               GGGG     R  L++  T E +T+   L+ KL +LGWE YY          A ++QFHK SSVDLISLP
Subjt:  MSGVWVFDNGVIRLAE---------------GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYED--------AEIVQFHKPSSVDLISLP

Query:  TDFS
         DFS
Subjt:  TDFS

Q9LGE3 Flowering-promoting factor 1-like protein 12.1e-1545.36Show/hide
Query:  MSGVWVFDNGVIRLAE-----GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFSIISLSLSLRDV
        MSGVWVF NGV+RL E      G       R  L++T + + +++   L+ +L +LGWE YYED  + QFHK  S+DLISLP DFS  S S+ + D+
Subjt:  MSGVWVFDNGVIRLAE-----GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFSIISLSLSLRDV

Q9LXB5 Flowering-promoting factor 1-like protein 22.2e-1754.55Show/hide
Query:  MSGVWVFDNGVIRLAE-----GGGGSRNRG-RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYE-DAEIVQFHKPSSVDLISLPTDFS
        MSGVWVF+NGVIRL E     GG  +++ G RNVL+Y  T EA+++ + L+  L SLGWE Y+  D++++Q+HK SS+DLISLP DFS
Subjt:  MSGVWVFDNGVIRLAE-----GGGGSRNRG-RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYE-DAEIVQFHKPSSVDLISLPTDFS

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.9e-1139.6Show/hide
Query:  MSGVWVFD-NGVIRLAE----------------GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY---EDAEIVQFHKPSSVDLISLPTDF
        MSGVWVF+ NGV+RL E                GG   +   R +L++  ++E +++   L+  L +LGWE YY       ++QFHK +S+DLISLP DF
Subjt:  MSGVWVFD-NGVIRLAE----------------GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY---EDAEIVQFHKPSSVDLISLPTDF

Query:  S
        S
Subjt:  S

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.6e-1854.55Show/hide
Query:  MSGVWVFDNGVIRLAE-----GGGGSRNRG-RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYE-DAEIVQFHKPSSVDLISLPTDFS
        MSGVWVF+NGVIRL E     GG  +++ G RNVL+Y  T EA+++ + L+  L SLGWE Y+  D++++Q+HK SS+DLISLP DFS
Subjt:  MSGVWVFDNGVIRLAE-----GGGGSRNRG-RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYE-DAEIVQFHKPSSVDLISLPTDFS

AT5G24860.1 flowering promoting factor 11.1e-1651.72Show/hide
Query:  MSGVWVFDNGVIRLAE----GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY--EDAEIVQFHKPSSVDLISLPTDFS
        MSGVWVF NGVIRL E     G  ++NR R V++Y  T E +++ + L+  L SLGWE Y+   D +++QFHK SS+DLISLP DF+
Subjt:  MSGVWVFDNGVIRLAE----GGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY--EDAEIVQFHKPSSVDLISLPTDFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGCGTTTGGGTTTTCGACAACGGGGTGATCCGGCTGGCGGAGGGCGGCGGAGGCAGTAGAAACCGGGGGCGGAATGTTCTAATTTACACGGCGACGAACGAGGC
GATGACGACATTGACGGTGCTTAAGAACAAGCTGTTGAGTTTGGGATGGGAAATTTACTATGAAGATGCAGAGATTGTGCAGTTTCATAAGCCTTCTTCTGTGGACCTTA
TTTCCCTTCCCACGGACTTTTCTATCATCTCTCTCTCTCTCTCTCTCCGAGATGTTTCGTTCGTGCCTTCTGCAAAACTCCCTTTTATTTACATGGATCCTAAGGCACGG
ATTCCGATCAAGAAGAGATATCTCTTCATTCCTCCTCATATTATTATTTCAACGGGGATTTTCCACCCTGTTTGGAGTGGATTCCCTCAAGGTCGAACCGTACGCCGTAT
GTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGCGTTTGGGTTTTCGACAACGGGGTGATCCGGCTGGCGGAGGGCGGCGGAGGCAGTAGAAACCGGGGGCGGAATGTTCTAATTTACACGGCGACGAACGAGGC
GATGACGACATTGACGGTGCTTAAGAACAAGCTGTTGAGTTTGGGATGGGAAATTTACTATGAAGATGCAGAGATTGTGCAGTTTCATAAGCCTTCTTCTGTGGACCTTA
TTTCCCTTCCCACGGACTTTTCTATCATCTCTCTCTCTCTCTCTCTCCGAGATGTTTCGTTCGTGCCTTCTGCAAAACTCCCTTTTATTTACATGGATCCTAAGGCACGG
ATTCCGATCAAGAAGAGATATCTCTTCATTCCTCCTCATATTATTATTTCAACGGGGATTTTCCACCCTGTTTGGAGTGGATTCCCTCAAGGTCGAACCGTACGCCGTAT
GTGTTAA
Protein sequenceShow/hide protein sequence
MSGVWVFDNGVIRLAEGGGGSRNRGRNVLIYTATNEAMTTLTVLKNKLLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFSIISLSLSLRDVSFVPSAKLPFIYMDPKAR
IPIKKRYLFIPPHIIISTGIFHPVWSGFPQGRTVRRMC