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Carg17373 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17373
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:9062920..9070378
RNA-Seq ExpressionCarg17373
SyntenyCarg17373
Gene Ontology termsGO:0000124 - SAGA complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597489.1 Vesicle-associated protein 2-2, partial [Cucurbita argyrosperma subsp. sororia]6.1e-111100Show/hide
Query:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
        MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
Subjt:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK

Query:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
        EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
Subjt:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL

Query:  TQKKLST
        TQKKLST
Subjt:  TQKKLST

KAG7028950.1 hypothetical protein SDJN02_10133 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-111100Show/hide
Query:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
        MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
Subjt:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK

Query:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
        EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
Subjt:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL

Query:  TQKKLST
        TQKKLST
Subjt:  TQKKLST

XP_022939118.1 uncharacterized protein LOC111445115 isoform X1 [Cucurbita moschata]6.1e-111100Show/hide
Query:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
        MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
Subjt:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK

Query:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
        EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
Subjt:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL

Query:  TQKKLST
        TQKKLST
Subjt:  TQKKLST

XP_022939133.1 uncharacterized protein LOC111445115 isoform X2 [Cucurbita moschata]6.1e-111100Show/hide
Query:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
        MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
Subjt:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK

Query:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
        EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
Subjt:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL

Query:  TQKKLST
        TQKKLST
Subjt:  TQKKLST

XP_023540651.1 uncharacterized protein LOC111800950 [Cucurbita pepo subsp. pepo]9.8e-10998.07Show/hide
Query:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
        MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHP TKRSKLITGEGLLLTSDLEPSSAK KIRYVPFPLASKIYYSQR+NHLRSALGYLYWEAVASSK
Subjt:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK

Query:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
        EICNTVDHEMTKENVKQFDNSSQEESSQEQTN+IIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
Subjt:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL

Query:  TQKKLST
        TQKKLST
Subjt:  TQKKLST

TrEMBL top hitse value%identityAlignment
A0A6J1FKS5 uncharacterized protein LOC111445115 isoform X13.0e-111100Show/hide
Query:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
        MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
Subjt:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK

Query:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
        EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
Subjt:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL

Query:  TQKKLST
        TQKKLST
Subjt:  TQKKLST

A0A6J1FKT9 uncharacterized protein LOC111445115 isoform X23.0e-111100Show/hide
Query:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
        MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
Subjt:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK

Query:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
        EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
Subjt:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL

Query:  TQKKLST
        TQKKLST
Subjt:  TQKKLST

A0A6J1IE16 uncharacterized protein LOC111472316 isoform X16.2e-10998.07Show/hide
Query:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
        MVKLTK NTYNVAPIPDDFTGVCPGVVDHSASLTHP TKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
Subjt:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK

Query:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
        EICNTVDHEMTKENVKQFDNSSQEESSQEQTN+IIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFS GKCLPAGGASNQFVVGSSVAWPQIAPVEL
Subjt:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL

Query:  TQKKLST
        TQKKLST
Subjt:  TQKKLST

A0A6J1IFI7 uncharacterized protein LOC111472316 isoform X26.2e-10998.07Show/hide
Query:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
        MVKLTK NTYNVAPIPDDFTGVCPGVVDHSASLTHP TKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK
Subjt:  MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSK

Query:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL
        EICNTVDHEMTKENVKQFDNSSQEESSQEQTN+IIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFS GKCLPAGGASNQFVVGSSVAWPQIAPVEL
Subjt:  EICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVEL

Query:  TQKKLST
        TQKKLST
Subjt:  TQKKLST

A0A6J1IXG1 uncharacterized protein LOC111479416 isoform X18.1e-7776.44Show/hide
Query:  MVKLTKRN-TYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASS
        MVKLTKRN T  VAPI DD  GVC GVVDHS S  HPSTKRSKLITGEGLLL SDLEPSS+K KI+  PFPLASKIYYSQRNN LRS L YLYWEAV+SS
Subjt:  MVKLTKRN-TYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASS

Query:  KEICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVE
        KEICN VDH MTKEN+KQF ++SQEE SQEQ++++IGKK            MDSHSLTSA K D NLAIFSSGKCLPAGGAS +FV GSSVAWPQIAPVE
Subjt:  KEICNTVDHEMTKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVE

Query:  LTQKKLST
        LTQKKLST
Subjt:  LTQKKLST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAGTTAACAAAAAGAAATACCTACAATGTGGCGCCTATACCCGATGATTTTACAGGAGTCTGTCCTGGTGTTGTAGATCATTCAGCTAGTTTGACACATCCTTC
CACAAAGCGGTCCAAATTGATAACTGGTGAAGGACTGTTACTGACATCTGATTTAGAGCCATCGTCAGCTAAAGCAAAAATTAGATATGTTCCGTTTCCTCTTGCAAGTA
AAATATATTACTCTCAAAGAAATAATCATTTACGTTCTGCGCTTGGTTATCTTTACTGGGAGGCTGTTGCATCTAGCAAGGAAATTTGTAATACGGTGGATCATGAAATG
ACGAAGGAAAATGTAAAACAATTTGATAATTCTTCTCAGGAGGAGTCGTCCCAAGAACAAACAAATGAGATTATTGGAAAGAAGGGAAAACTTAAAAGAAAGTTGCATCA
CGAACATCAGATGGATAGTCATTCCTTAACCTCTGCATTGAAACCTGACAACAATCTGGCCATATTCTCATCTGGGAAATGTCTGCCTGCCGGTGGTGCCTCAAATCAGT
TTGTTGTTGGCAGCAGTGTTGCATGGCCACAGATTGCTCCAGTTGAATTGACACAGAAAAAACTATCCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATCGAAGAACGGCGACGAAGATTTCTGATTTGGCAGTTGCCAAATGGCACCTCACATTTTCTTCTGTTTGCGCGGCGAAGTGAAGAAAGAGAGAGATTTCAGATAAGAAG
ACCAAAACCACTGCGAAGGAAAAATTCCCGCCCTCTTTCTCTCTACCTCGCTTCTTCCATAGGGTTTCTTCTCTCTTCTCGGCCATCTCTTCCGCAGCATTTCTCACAAA
TTTCGCAGAATTCGTTTCTGCAATTGTTTCGAAATTATCTGCTTTCTCGTCGGTTTCTGTGGGCGTGTATGATTGGAGGAGCTTCTCTGCAGATGTTTTTATTCCCAGCG
GTGTAAAACTTCTTCCTTCGCGTACAATACATTTGCATAGTCTCAATGGTTTGCTCAGTTGGAAGTGTGAGAATGGCGGTGATGACAAGGCTTCTGGCTGCTGGGAGTTT
CTCGCGAACTATTGCAGAGGAAGCTGGTCATCAGAAATTAGCGTCTGAATTTCTCTGCAGAGAACTTCGTGATGCAGATGAAGCAAATTTAATTGATGAAGAAGATATGC
ACGTTTTTGGTTTGAAGCCCATGACCGATCCTCTGAATTTGGTTTGCTGCAATATCTGTAAGAAGCCAGTAAAGGCCAGCCAATACATCATTCATTCTGAACTTTGCAGG
TCATTAGGTTTGGGACAAGGAGCTATTATGGACCTTGATGGTGGGATGGGCCATAGAAAACACTCGAGGAAGGAGAGCAAAAAGCTATTACCTGCTGATGCTATTCTTAA
TATTTCCTAGATATATCAGCTCTGGAGAAAGAAGGATCTGAATCAGCATATGCTGATTATTCTGCTTCCCCTGCATTTCCAACTAATAACCAATTTGAAATGGTCAAGTT
AACAAAAAGAAATACCTACAATGTGGCGCCTATACCCGATGATTTTACAGGAGTCTGTCCTGGTGTTGTAGATCATTCAGCTAGTTTGACACATCCTTCCACAAAGCGGT
CCAAATTGATAACTGGTGAAGGACTGTTACTGACATCTGATTTAGAGCCATCGTCAGCTAAAGCAAAAATTAGATATGTTCCGTTTCCTCTTGCAAGTAAAATATATTAC
TCTCAAAGAAATAATCATTTACGTTCTGCGCTTGGTTATCTTTACTGGGAGGCTGTTGCATCTAGCAAGGAAATTTGTAATACGGTGGATCATGAAATGACGAAGGAAAA
TGTAAAACAATTTGATAATTCTTCTCAGGAGGAGTCGTCCCAAGAACAAACAAATGAGATTATTGGAAAGAAGGGAAAACTTAAAAGAAAGTTGCATCACGAACATCAGA
TGGATAGTCATTCCTTAACCTCTGCATTGAAACCTGACAACAATCTGGCCATATTCTCATCTGGGAAATGTCTGCCTGCCGGTGGTGCCTCAAATCAGTTTGTTGTTGGC
AGCAGTGTTGCATGGCCACAGATTGCTCCAGTTGAATTGACACAGAAAAAACTATCCACCTAGACGGCTAGTCCTAACTATTTTGAAGATATTTCAGGCAAACCATTGTA
GACTAGGCAACAGCCAAGCTGAAGTGTCCTTGTTGTATAGAAGTCTTGGTGGCACGTTTTTGTAGGCACAGTGCTATATGTAATTAACCCTAAACTTGAGGTTAGGACCC
TAAACCTTGTTTTTGATATTGGCAATGAAAATCATTTGAAATTGTTCATTCTATCTCTTTGTATTTAATCTCTTCTGTTCACTGCCAAGTGTAAATATGTCTTTCAGCCA
CTTCAAATGCGATCATTTTAATTTTTGTGAAGGCTCTCTCTCTCGCCAGTAGATATTTATTAGATGACAGTGTTAGAGCTGAAGGAACTAAAAACATGACTTATTTCTTC
TCCTTTCTTCGGAAGAAACTAGATGTTTGGTTCGGTTCGGTTAGGTTAGATTAGATTAGGTTAGGTTAAAGTTTTTATGTCAAGAATATAACGACTTAAGAGAGTTTGTT
ATCTTGGAGTTGCT
Protein sequenceShow/hide protein sequence
MVKLTKRNTYNVAPIPDDFTGVCPGVVDHSASLTHPSTKRSKLITGEGLLLTSDLEPSSAKAKIRYVPFPLASKIYYSQRNNHLRSALGYLYWEAVASSKEICNTVDHEM
TKENVKQFDNSSQEESSQEQTNEIIGKKGKLKRKLHHEHQMDSHSLTSALKPDNNLAIFSSGKCLPAGGASNQFVVGSSVAWPQIAPVELTQKKLST