CuGenDBv2

Gene ID	Carg17385
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SpoU_methylase domain-containing protein
Genome location	Carg_Chr06:9002492..9006665
RNA-Seq Expression	Carg17385
Synteny	Carg17385
Gene Ontology terms	GO:0001510 - RNA methylation (biological process) GO:0006396 - RNA processing (biological process) GO:0003723 - RNA binding (molecular function) GO:0008173 - RNA methyltransferase activity (molecular function)
InterPro domains	IPR001537 - tRNA/rRNA methyltransferase, SpoU type IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal IPR029028 - Alpha/beta knot methyltransferases

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597480.1 putative E3 ubiquitin-protein ligase 298, partial [Cucurbita argyrosperma subsp. sororia]

4.8e-122

100

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Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDTLFINE
        GTIDDSTSNLLDTLFINE
Subjt:  GTIDDSTSNLLDTLFINE

KAG7028939.1 tRNA (guanosine(18)-2'-O)-methyltransferase [Cucurbita argyrosperma subsp. argyrosperma]

4.8e-122

100

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Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDTLFINE
        GTIDDSTSNLLDTLFINE
Subjt:  GTIDDSTSNLLDTLFINE

XP_022953849.1 uncharacterized protein LOC111456233 isoform X1 [Cucurbita moschata]

4.8e-122

100

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Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDTLFINE
        GTIDDSTSNLLDTLFINE
Subjt:  GTIDDSTSNLLDTLFINE

XP_022953920.1 uncharacterized protein LOC111456233 isoform X2 [Cucurbita moschata]

4.8e-122

100

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Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDTLFINE
        GTIDDSTSNLLDTLFINE
Subjt:  GTIDDSTSNLLDTLFINE

XP_022973638.1 uncharacterized protein LOC111472230 isoform X2 [Cucurbita maxima]

4.8e-122

100

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Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDTLFINE
        GTIDDSTSNLLDTLFINE
Subjt:  GTIDDSTSNLLDTLFINE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AXA1 putative TrmH family tRNA/rRNA methyltransferase

7.9e-115

93.12

Show/hide

Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MG ESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHSLLDA+ FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPV+Q KRNYC ETEESI+EERKSRR+NASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDTLFINE
        G IDDSTSNLLDTLFI++
Subjt:  GTIDDSTSNLLDTLFINE

A0A6J1GR02 uncharacterized protein LOC111456233 isoform X2

2.3e-122

100

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Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDTLFINE
        GTIDDSTSNLLDTLFINE
Subjt:  GTIDDSTSNLLDTLFINE

A0A6J1GR06 uncharacterized protein LOC111456233 isoform X1

2.3e-122

100

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Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDTLFINE
        GTIDDSTSNLLDTLFINE
Subjt:  GTIDDSTSNLLDTLFINE

A0A6J1I824 uncharacterized protein LOC111472230 isoform X1

1.8e-119

100

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Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDT
        GTIDDSTSNLLDT
Subjt:  GTIDDSTSNLLDT

A0A6J1IDR0 uncharacterized protein LOC111472230 isoform X2

2.3e-122

100

Show/hide

Query:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
Subjt:  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDDSTSNLLDTLFINE
        GTIDDSTSNLLDTLFINE
Subjt:  GTIDDSTSNLLDTLFINE

SwissProt top hits

e value

%identity

Alignment

Q4L3J1 Putative TrmH family tRNA/rRNA methyltransferase

1.0e-10

32.19

Show/hide

Query:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST
        G  + V++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV      +L    + L+E    + G E  DNA            
Subjt:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST

Query:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH
        A ++G+EG G+S      CDF+I IP  G    SLN +VAAS++++
Subjt:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH

Q6GBV6 Putative TrmH family tRNA/rRNA methyltransferase

3.0e-10

30.82

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Query:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST
        G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV      +L    + L++    + G E  +NA          S 
Subjt:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST

Query:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH
        A ++G+EG G+S      CDF+I IP  G    SLN +VAAS++++
Subjt:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH

Q6GJD7 Putative TrmH family tRNA/rRNA methyltransferase

3.0e-10

30.82

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Query:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST
        G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV      +L    + L++    + G E  +NA          S 
Subjt:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST

Query:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH
        A ++G+EG G+S      CDF+I IP  G    SLN +VAAS++++
Subjt:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH

Q7A794 Putative TrmH family tRNA/rRNA methyltransferase

3.0e-10

30.82

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Query:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST
        G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV      +L    + L++    + G E  +NA          S 
Subjt:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST

Query:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH
        A ++G+EG G+S      CDF+I IP  G    SLN +VAAS++++
Subjt:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH

Q99W72 Putative TrmH family tRNA/rRNA methyltransferase

3.0e-10

30.82

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Query:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST
        G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV      +L    + L++    + G E  +NA          S 
Subjt:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRST

Query:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH
        A ++G+EG G+S      CDF+I IP  G    SLN +VAAS++++
Subjt:  AFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH

Arabidopsis top hits

e value

%identity

Alignment

AT4G15520.1 tRNA/rRNA methyltransferase (SpoU) family protein

4.6e-99

78.18

Show/hide

Query:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFL-QEKDCDICGVEITDNAVAVNQHPFKRSTAFLL
        GFESYVVVHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGS SH+RFRHFHSL++ARN+L +EKDCDICGVEI D A AVN+HPFKR+TAFLL
Subjt:  GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFL-QEKDCDICGVEITDNAVAVNQHPFKRSTAFLL

Query:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE
        GNEG+GLSAKE  ICDFF+YIPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDG+KFIVA+RPV+QG+RN+C  TEES++EERK R+++A  GFFD+
Subjt:  GNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDE

Query:  GTIDD--STSNLLDTLFINE
           ++  S+S+LLD LF+NE
Subjt:  GTIDD--STSNLLDTLFINE

AT5G15390.1 tRNA/rRNA methyltransferase (SpoU) family protein

1.4e-07

24.35

Show/hide

Query:  VVVHNIAKRHNVGTLARSATAFGVSEVILVG-----RRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLG
        +VV  ++   N+    RSA A G+  V +V      R + N   S G+   +    + +  +    L+ +   I    +  + V++    +   TA ++G
Subjt:  VVVHNIAKRHNVGTLARSATAFGVSEVILVG-----RRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLG

Query:  NEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNAS
        NEG G+S +   + D    IP  G+   S NV+VAA I++HH                  V++R  + G      E E+ I+    S R + S
Subjt:  NEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNAS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGTTCGAAAGCTATGTCGTCGTACATAACATAGCCAAAAGGCACAACGTTGGCACATTGGCCCGAAGCGCCACCGCGTTCGGTGTATCGGAGGTCATCCTCGTCGG
CCGTCGGGACTTCAACGCCTTCGGTAGCCATGGTTCCACTTCTCACGTCCGGTTCCGTCATTTTCATTCCCTTCTCGACGCCCGAAATTTCCTTCAGGAGAAGGACTGTG
ATATATGTGGCGTGGAGATCACTGATAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTCGGCAACGAGGGAACAGGGCTTTCTGCTAAA
GAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTCGGCACCGCTTCTTTGAATGTCACTGTAGCTGCTTCAATTGTCCTACATCATTTTGGTGTTTG
GGCAGGCTTTCCCGAACGATGTCGTGATGGTAACAAGTTTATAGTGGCCGAAAGACCAGTAAAGCAAGGCAAGCGGAATTATTGCCCTGAAACAGAAGAATCTATTGTTG
AAGAGCGAAAGTCCAGGCGGGATAATGCTTCGAAAGGCTTCTTTGACGAGGGAACGATCGATGATTCGACATCCAACCTTCTCGATACATTGTTTATTAACGAATGA

mRNA sequence

Show/hide mRNA sequence

TAAATACTAAATTAAAATTAGCGTTTAACGGTAGTGCGAACAGCCGCGAAACGACACCGTATTGAAAAGAATTCATCAGACGCCAGGGCCAGGCTGAACTGTGAACCGCT
CCTTCTTCTTCGATCCGCCGCCAGAACTGAGTTGCAGGCTCTGTCAAAACCCTCAATCCGTAAACCCCATCACTTTCTCTTCAATCATTTCATCGCCATTGAATTCGAAA
TGGGGTTCGAAAGCTATGTCGTCGTACATAACATAGCCAAAAGGCACAACGTTGGCACATTGGCCCGAAGCGCCACCGCGTTCGGTGTATCGGAGGTCATCCTCGTCGGC
CGTCGGGACTTCAACGCCTTCGGTAGCCATGGTTCCACTTCTCACGTCCGGTTCCGTCATTTTCATTCCCTTCTCGACGCCCGAAATTTCCTTCAGGAGAAGGACTGTGA
TATATGTGGCGTGGAGATCACTGATAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTCGGCAACGAGGGAACAGGGCTTTCTGCTAAAG
AGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTCGGCACCGCTTCTTTGAATGTCACTGTAGCTGCTTCAATTGTCCTACATCATTTTGGTGTTTGG
GCAGGCTTTCCCGAACGATGTCGTGATGGTAACAAGTTTATAGTGGCCGAAAGACCAGTAAAGCAAGGCAAGCGGAATTATTGCCCTGAAACAGAAGAATCTATTGTTGA
AGAGCGAAAGTCCAGGCGGGATAATGCTTCGAAAGGCTTCTTTGACGAGGGAACGATCGATGATTCGACATCCAACCTTCTCGATACATTGTTTATTAACGAATGAACGG
AGTTGAAGCTGGGAGTCGTCATTCGACATCCAACCTTCTTGATACACAACCCACATCAGACTGCATGATTATTGTAGCTCATTGCTGGAAGCTGTTCTGGAAAGAAAGGA
ACTCCTTCTCCTTTGTCTTTATCTCTTTTTGTTCTTAGATTTCGATATTCCTAGAACGTTCGTGCGGTTATATTTAGTTAATTAGCTTGATGACTTACTCGGTCGTTTCG
TCGAAAGGTACTTCCGATCACCACATTGTTAAGGCGAGTTTGTAAAAATAGGACAGAAAGCAAGCAGAAGGCAGAAGGATTTAAAGCAAAGGGTTGCAAGGTTGACTCAA
ACATGTTCTTCATTAGGGATGTCATTGATACATACTTAGATTAGTTATACAAAAGTTATATCAGTTTGTACCATTTGGAAATTTGGGCTAAATCTAATCGATAGTCATTA
AATTGTTTTTCTACGTGCAATAGGTATTTTTCATAACAAAACATTTAGAATTATGTACGTTGAACTGGAATGTGTACTCTCCGTACAAG

Protein sequence

Show/hide protein sequence

MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAK
ECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE

Carg17385 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome