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Carg17404 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17404
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:8912342..8914251
RNA-Seq ExpressionCarg17404
SyntenyCarg17404
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597461.1 hypothetical protein SDJN03_10641, partial [Cucurbita argyrosperma subsp. sororia]5.0e-60100Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN

Query:  RQFPIAIDVNSQVSNNNSLRPKKG
        RQFPIAIDVNSQVSNNNSLRPKKG
Subjt:  RQFPIAIDVNSQVSNNNSLRPKKG
KAG7028920.1 hypothetical protein SDJN02_10103 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-60100Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN

Query:  RQFPIAIDVNSQVSNNNSLRPKKG
        RQFPIAIDVNSQVSNNNSLRPKKG
Subjt:  RQFPIAIDVNSQVSNNNSLRPKKG
XP_022933798.1 uncharacterized protein LOC111441102 [Cucurbita moschata]5.5e-5998.39Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIV AYSGVSKGTGVFIPRSLQ ARKQRRGRYNNIKAN
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN

Query:  RQFPIAIDVNSQVSNNNSLRPKKG
        RQFPIAIDVNSQVSNNNSLRPKKG
Subjt:  RQFPIAIDVNSQVSNNNSLRPKKG
XP_022973676.1 uncharacterized protein LOC111472261 [Cucurbita maxima]7.2e-5997.58Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQ ARKQRRGRYNNIKAN
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN

Query:  RQFPIAIDVNSQVSNNNSLRPKKG
        RQFPI +DVNSQVSNNNSLRPKKG
Subjt:  RQFPIAIDVNSQVSNNNSLRPKKG
XP_023539236.1 uncharacterized protein LOC111799938 [Cucurbita pepo subsp. pepo]7.2e-5998.39Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQ ARKQRRGRYNNIKAN
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN

Query:  RQFPIAIDVNSQVSNNNSLRPKKG
        RQFPIAIDVNSQVSNNNSL PKKG
Subjt:  RQFPIAIDVNSQVSNNNSLRPKKG
TrEMBL top hitse value%identityAlignment
A0A0A0LAE7 Uncharacterized protein2.6e-4684.13Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQ-AAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKA
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP HPHVSLQAL+HG H P RPLA H+  AAAA+ AAY+GVSKGTGVFIPRSLQ ARKQRRGR+NNIK 
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQ-AAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKA

Query:  NRQFPIAIDVNSQV-SNNNSLRPKKG
        NRQF I+IDVNSQV SNN+S+RPKKG
Subjt:  NRQFPIAIDVNSQV-SNNNSLRPKKG
A0A1S3AX25 uncharacterized protein LOC1034837332.0e-4684Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP  PHVSLQAL+HG H P RPLA H+ AAAA+ AAY+GVSKGTGVFIPRSLQ ARKQRRGR+NNIK N
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN

Query:  RQFPIAIDVNSQVSNNNSL-RPKKG
        RQF I+IDVNSQVS+NN L RPKKG
Subjt:  RQFPIAIDVNSQVSNNNSL-RPKKG
A0A5D3D068 Uncharacterized protein2.0e-4684Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP  PHVSLQAL+HG H P RPLA H+ AAAA+ AAY+GVSKGTGVFIPRSLQ ARKQRRGR+NNIK N
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN

Query:  RQFPIAIDVNSQVSNNNSL-RPKKG
        RQF I+IDVNSQVS+NN L RPKKG
Subjt:  RQFPIAIDVNSQVSNNNSL-RPKKG
A0A6J1F5U9 uncharacterized protein LOC1114411022.7e-5998.39Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIV AYSGVSKGTGVFIPRSLQ ARKQRRGRYNNIKAN
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN

Query:  RQFPIAIDVNSQVSNNNSLRPKKG
        RQFPIAIDVNSQVSNNNSLRPKKG
Subjt:  RQFPIAIDVNSQVSNNNSLRPKKG
A0A6J1I9A5 uncharacterized protein LOC1114722613.5e-5997.58Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN
        MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQ ARKQRRGRYNNIKAN
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKAN

Query:  RQFPIAIDVNSQVSNNNSLRPKKG
        RQFPI +DVNSQVSNNNSLRPKKG
Subjt:  RQFPIAIDVNSQVSNNNSLRPKKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06070.1 unknown protein3.9e-1039.53Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMD-DNEDPLPHHPHVSLQALAHGGHQ-PARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARK-------QRR
        M + LEL+DD+FFAD+S+QL+LL+ D D ++P+     VS Q L  G +Q  A P  ++++     V      SKGTGVFIPRS Q  RK       +++
Subjt:  MEVALELEDDLFFADLSRQLSLLLMD-DNEDPLPHHPHVSLQALAHGGHQ-PARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARK-------QRR

Query:  GRY-NNIKANRQFP-IAIDVNSQVSNNNS
        GR+  +    +QFP    D N    NNN+
Subjt:  GRY-NNIKANRQFP-IAIDVNSQVSNNNS
AT5G19190.1 unknown protein9.2e-1236.43Show/hide
Query:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP-----HHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARK----QRR
        M + LEL+DD+FFAD+S+Q+SLL+MD++E   P         +S Q L  GG+Q A  +   +Q            SKGTGVFIP+S Q  R+    Q++
Subjt:  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP-----HHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARK----QRR

Query:  GRYNNIKANRQFPIAIDVNSQVSNNNSLR
        GRY++  A +Q  +  +      N+ + R
Subjt:  GRYNNIKANRQFPIAIDVNSQVSNNNSLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTCGCTGATTTAAGCAGACAGCTCTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCATCCCCA
TGTTTCTCTTCAGGCTCTCGCTCATGGAGGCCACCAGCCTGCACGGCCACTGGCGGTGCATGACCAAGCTGCCGCTGCTATTGTCGCTGCCTACAGTGGCGTAAGCAAAG
GCACCGGCGTGTTCATCCCTCGGTCTTTGCAGTCTGCAAGAAAACAGAGGCGTGGAAGATACAATAACATAAAGGCAAACCGACAGTTTCCAATCGCTATTGATGTGAAT
TCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTTAA
mRNA sequenceShow/hide mRNA sequence
TTTTCTGTGTTAAGCTTCTTATGGATTTCCTGAACAGTCTGTCTACGAATTGAGATGTTTGGGTTATAGATAAGGTTTGGATATTTCGACCATAAAAAGATTAATCAGAA
TCGTTGGCTTATTAAAACTATGAGCCAAACGTTTCTTCGACGTTGTTTATGTTCCTGTAATGCAGCTGGCCCCGCGAAAGAGATGCCCGACGACTGCTGAACTGATGGTC
TTAAACAACACACAGATGCACGGATGAGTACCAATGACTTAGCTTAGCTAGTTGAGAGCCTGATAGATCCTCTCCCATGTACGACAATACAGTTCTTTTGTAGCTCTGAG
TATAGACAACATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTCGCTGATTTAAGCAGACAGCTCTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTC
ATCATCCCCATGTTTCTCTTCAGGCTCTCGCTCATGGAGGCCACCAGCCTGCACGGCCACTGGCGGTGCATGACCAAGCTGCCGCTGCTATTGTCGCTGCCTACAGTGGC
GTAAGCAAAGGCACCGGCGTGTTCATCCCTCGGTCTTTGCAGTCTGCAAGAAAACAGAGGCGTGGAAGATACAATAACATAAAGGCAAACCGACAGTTTCCAATCGCTAT
TGATGTGAATTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTTAAGGATTCGAGGAATTTGAGGAAAAGGGTATCAGAATTTAGATTAAAAAAATAATTC
TTTCACCAAGTATTTAAGTACGGTGATGCCTGTACATGGAAGAAGCTATAGTATTAGCTCTATTAATTACTGGGTTTTCATTGGTTTATGTGTTCCATTGGAAGGTTAAT
TAATTAACCTAAGGTTTGTGAACCTCCCTCCTTGTGTTCTTCTTCACGAGAGAAAGAGTTCGTTTGTTAGGATCGTCAATCCAAACATAACTCAAAGGTACTAAATACTC
GAATCTCGACTGCAAAAGCTGAGATGAGTCTGAATTTGTGTTGTAATATGCTCTTAACTGGCAGCCATGCAGTGGCACATGAGCCGTCATGTTTGGATAGCTGGATCTCT
GTTGCAAAGAAAGCTAAAGTTCTCTAAAAACATATTCACAGTGAGACAGAGGAGAGAGAAGGATTCCTACGCTTTCGATCTCGATAATTACCTATATATTTTAACTAGTT
GAATCAAGTTATAATTAAATTATGTAACCCATTTCGTTACTGATTAAATTATATGA
Protein sequenceShow/hide protein sequence
MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKANRQFPIAIDVN
SQVSNNNSLRPKKG