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Carg17413 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17413
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthermospermine synthase ACAULIS5-like
Genome locationCarg_Chr06:8855962..8856694
RNA-Seq ExpressionCarg17413
SyntenyCarg17413
Gene Ontology termsGO:0006596 - polyamine biosynthetic process (biological process)
GO:0010487 - thermospermine synthase activity (molecular function)
InterPro domainsIPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR030374 - Polyamine biosynthesis domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597450.1 Thermospermine synthase ACAULIS5, partial [Cucurbita argyrosperma subsp. sororia]3.3e-64100Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAAAACKLNQV
        TEGTARFIYGYGAAAACKLNQV
Subjt:  TEGTARFIYGYGAAAACKLNQV

KAG7028911.1 Thermospermine synthase ACAULIS5, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-65100Show/hide
Query:  MQAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHV
        MQAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHV
Subjt:  MQAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHV

Query:  YTEGTARFIYGYGAAAACKLNQV
        YTEGTARFIYGYGAAAACKLNQV
Subjt:  YTEGTARFIYGYGAAAACKLNQV

XP_022934423.1 thermospermine synthase ACAULIS5-like [Cucurbita moschata]3.3e-64100Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAAAACKLNQV
        TEGTARFIYGYGAAAACKLNQV
Subjt:  TEGTARFIYGYGAAAACKLNQV

XP_022973651.1 thermospermine synthase ACAULIS5-like [Cucurbita maxima]2.8e-6399.18Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIK ENKYFDGKTFSSASTLSKAVRKSLDNETHVY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAAAACKLNQV
        TEGTARFIYGYGAAAACKLNQV
Subjt:  TEGTARFIYGYGAAAACKLNQV

XP_023539341.1 thermospermine synthase ACAULIS5-like [Cucurbita pepo subsp. pepo]3.3e-64100Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAAAACKLNQV
        TEGTARFIYGYGAAAACKLNQV
Subjt:  TEGTARFIYGYGAAAACKLNQV

TrEMBL top hitse value%identityAlignment
A0A0A0L7M9 Spermine synthase1.0e-5895.08Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPF LNADDLDQRIKQRI GENKYFDGKTFSSASTLSKAVRKSLDNET VY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAAAACKLNQV
        TE TARFIYGYG A ACKLNQV
Subjt:  TEGTARFIYGYGAAAACKLNQV

A0A5D3D0P3 Thermospermine synthase ACAULIS5-like1.0e-5895.08Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPF LNADDLDQRIKQRI GENKYFDGKTFSSASTLSKAVRKSLDNET VY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAAAACKLNQV
        TE TARFIYGYG A ACKLNQV
Subjt:  TEGTARFIYGYGAAAACKLNQV

A0A6J1C9S2 thermospermine synthase ACAULIS5-like2.2e-6197.54Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMAS+TPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLD ETHVY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAAAACKLNQV
        TEGTARFIYGYG AAACKLNQV
Subjt:  TEGTARFIYGYGAAAACKLNQV

A0A6J1F7M2 thermospermine synthase ACAULIS5-like1.6e-64100Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAAAACKLNQV
        TEGTARFIYGYGAAAACKLNQV
Subjt:  TEGTARFIYGYGAAAACKLNQV

A0A6J1IJL1 thermospermine synthase ACAULIS5-like1.4e-6399.18Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIK ENKYFDGKTFSSASTLSKAVRKSLDNETHVY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAAAACKLNQV
        TEGTARFIYGYGAAAACKLNQV
Subjt:  TEGTARFIYGYGAAAACKLNQV

SwissProt top hitse value%identityAlignment
C3N5P4 Polyamine aminopropyltransferase3.2e-0932.97Show/hide
Query:  EVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVYTE
        EV+  IYNT+K+VFK       ++ SF   WG+V     P +L+ D+++ RI++RI G+ +++D  +   + +L K ++      T V TE
Subjt:  EVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVYTE

Q4JAZ8 Polyamine aminopropyltransferase3.1e-1238.04Show/hide
Query:  EVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASD--TPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVYT
        + F+ IY+TLK VFK V     ++PSF   WG++ ASD   P  LN + ++ RIK+R+ G  +++DG+T      + K +R+ ++NE  V T
Subjt:  EVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASD--TPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVYT

Q975S5 Polyamine aminopropyltransferase3.1e-1238.04Show/hide
Query:  EVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASD--TPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVYT
        E FS IYNT+K VFK V     ++P+F   WG+V ASD   P   + ++++ RIK+RI G  +++DG+T  +  ++ K +R+ L+ E  + T
Subjt:  EVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASD--TPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVYT

Q9S7X6 Thermospermine synthase ACAULIS53.1e-3659.65Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIF+H EVF+ IYNT+KQVFKYV  Y+AH+PSFADTWGWVMASD  F +  D++D+RI++R+ GE  Y +  +F SA+TL+K +  +L+ ET VY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAA
        +E  ARFI+G+G A
Subjt:  TEGTARFIYGYGAA

Q9UXE4 Polyamine aminopropyltransferase6.4e-1032.97Show/hide
Query:  EVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVYTE
        EV+  IYNT+K+VFK       ++ SF   WG+V     P +L+ D++D +I +RI G+ +++DG +   + +L K ++      T + TE
Subjt:  EVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVYTE

Arabidopsis top hitse value%identityAlignment
AT5G19530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein2.2e-3759.65Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIF+H EVF+ IYNT+KQVFKYV  Y+AH+PSFADTWGWVMASD  F +  D++D+RI++R+ GE  Y +  +F SA+TL+K +  +L+ ET VY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAA
        +E  ARFI+G+G A
Subjt:  TEGTARFIYGYGAA

AT5G19530.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein2.2e-3759.65Show/hide
Query:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY
        QAGPAGIF+H EVF+ IYNT+KQVFKYV  Y+AH+PSFADTWGWVMASD  F +  D++D+RI++R+ GE  Y +  +F SA+TL+K +  +L+ ET VY
Subjt:  QAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVY

Query:  TEGTARFIYGYGAA
        +E  ARFI+G+G A
Subjt:  TEGTARFIYGYGAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCTGGCCCAGCTGGGATTTTCAGCCATACAGAAGTGTTTTCTTGCATCTATAACACCTTGAAGCAAGTTTTTAAATATGTGGTGCCTTATTCAGCTCATATTCC
TTCCTTTGCTGATACTTGGGGTTGGGTTATGGCATCCGACACTCCTTTTGTGCTGAATGCTGATGATTTAGACCAAAGAATCAAGCAAAGAATCAAAGGGGAGAACAAGT
ACTTTGATGGAAAGACATTCTCATCTGCCTCGACGTTAAGCAAGGCTGTTCGGAAGTCGCTCGACAACGAGACGCACGTGTACACGGAAGGAACGGCGAGGTTCATATAT
GGATATGGAGCTGCAGCAGCCTGCAAGCTGAACCAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCTGGCCCAGCTGGGATTTTCAGCCATACAGAAGTGTTTTCTTGCATCTATAACACCTTGAAGCAAGTTTTTAAATATGTGGTGCCTTATTCAGCTCATATTCC
TTCCTTTGCTGATACTTGGGGTTGGGTTATGGCATCCGACACTCCTTTTGTGCTGAATGCTGATGATTTAGACCAAAGAATCAAGCAAAGAATCAAAGGGGAGAACAAGT
ACTTTGATGGAAAGACATTCTCATCTGCCTCGACGTTAAGCAAGGCTGTTCGGAAGTCGCTCGACAACGAGACGCACGTGTACACGGAAGGAACGGCGAGGTTCATATAT
GGATATGGAGCTGCAGCAGCCTGCAAGCTGAACCAAGTTTGATAGGTGAAAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
Protein sequenceShow/hide protein sequence
MQAGPAGIFSHTEVFSCIYNTLKQVFKYVVPYSAHIPSFADTWGWVMASDTPFVLNADDLDQRIKQRIKGENKYFDGKTFSSASTLSKAVRKSLDNETHVYTEGTARFIY
GYGAAAACKLNQV