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Carg17414 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17414
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthermospermine synthase ACAULIS5-like
Genome locationCarg_Chr06:8854498..8855917
RNA-Seq ExpressionCarg17414
SyntenyCarg17414
Gene Ontology termsGO:0006596 - polyamine biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0010487 - thermospermine synthase activity (molecular function)
InterPro domainsIPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR030374 - Polyamine biosynthesis domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597450.1 Thermospermine synthase ACAULIS5, partial [Cucurbita argyrosperma subsp. sororia]3.9e-5299.05Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYE+TVKPRLKQDG
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IFITQ
Subjt:  IFITQ

KAG7028910.1 Thermospermine synthase ACAULIS5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-65100Show/hide
Query:  MADVSSANLVNNGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFY
        MADVSSANLVNNGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFY
Subjt:  MADVSSANLVNNGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFY

Query:  EHTVKPRLKQDGIFITQVFVEDENGRT
        EHTVKPRLKQDGIFITQVFVEDENGRT
Subjt:  EHTVKPRLKQDGIFITQVFVEDENGRT

XP_022934423.1 thermospermine synthase ACAULIS5-like [Cucurbita moschata]7.9e-53100Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IFITQ
Subjt:  IFITQ

XP_022973651.1 thermospermine synthase ACAULIS5-like [Cucurbita maxima]3.9e-5299.05Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYE+TVKPRLKQDG
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IFITQ
Subjt:  IFITQ

XP_023539341.1 thermospermine synthase ACAULIS5-like [Cucurbita pepo subsp. pepo]1.1e-5198.1Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENR+EQYDVIVGDLADPIEGGPCYKLYTKSFYE+TVKPRLKQDG
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IFITQ
Subjt:  IFITQ

TrEMBL top hitse value%identityAlignment
A0A0A0L7M9 Spermine synthase4.7e-5197.14Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAF DPRLELIINDARAELENRTE YDVIVGDLADPIEGGPCYKLYTKSFYE+TVKPRLKQDG
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IFITQ
Subjt:  IFITQ

A0A1S3AX06 thermospermine synthase ACAULIS5-like4.7e-5197.14Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAF DPRLELIINDARAELENRTE YDVIVGDLADPIEGGPCYKLYTKSFYE+TVKPRLKQDG
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IFITQ
Subjt:  IFITQ

A0A5D3D0P3 Thermospermine synthase ACAULIS5-like4.7e-5197.14Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAF DPRLELIINDARAELENRTE YDVIVGDLADPIEGGPCYKLYTKSFYE+TVKPRLKQDG
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IFITQ
Subjt:  IFITQ

A0A6J1F7M2 thermospermine synthase ACAULIS5-like3.8e-53100Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IFITQ
Subjt:  IFITQ

A0A6J1IJL1 thermospermine synthase ACAULIS5-like1.9e-5299.05Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYE+TVKPRLKQDG
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IFITQ
Subjt:  IFITQ

SwissProt top hitse value%identityAlignment
A2BJU2 Polyamine aminopropyltransferase 25.4e-2049.06Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIV-NKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQD
        G+T RE+LRH  VE V M DIDEE+V+  K +L   ++ AFS  +LEL+I D R  +EN   +YD I+ DL DP+EGGP  +LYT  FY   VK  L+  
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIV-NKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQD

Query:  GIFITQ
        G  +TQ
Subjt:  GIFITQ

B6YXJ9 Polyamine aminopropyltransferase3.5e-1943.4Show/hide
Query:  NGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQD
        +G T RE+LRHKTVEK +M +IDE V++  + Y+ V + AF DPR ELI++D    L+N  E++DVI+ D  DP+  GP   L+++ F+ +  + +L  +
Subjt:  NGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQD

Query:  GIFITQ
        G++ITQ
Subjt:  GIFITQ

Q2JQ57 Polyamine aminopropyltransferase4.6e-1945.28Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYL-IVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQD
        G+T RE+LR ++VE+VVM DID EVV  C+ +L  +++ +F DPR+E++I DA   L+     +DVI+ DL+DPIE GP Y+L+T+ F+   ++ +L+ D
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYL-IVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQD

Query:  GIFITQ
        G F  Q
Subjt:  GIFITQ

Q9S7X6 Thermospermine synthase ACAULIS52.3e-3966.67Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GS ARE+L+H T+EKVVMCDID+EVVDFC+ +L VN +AF + +LEL+I DA+AELE R E++D+IVGDLADP+EGGPCY+LYTKSFY++ +KP+L  +G
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IF+TQ
Subjt:  IFITQ

Q9YE02 Polyamine aminopropyltransferase2.3e-1842.99Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIV-NKEAFSDPRLELIINDARAELENRTEQ-YDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQ
        G+T RE+L+H++VEK VM DIDE VV+  + +L   ++ AF DPR E++I+DA   + ++ E  +DV++ DL DP+E GP  +LY++ +Y   VK  +  
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIV-NKEAFSDPRLELIINDARAELENRTEQ-YDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQ

Query:  DGIFITQ
         G+F+TQ
Subjt:  DGIFITQ

Arabidopsis top hitse value%identityAlignment
AT1G23820.1 spermidine synthase 14.5e-1437.38Show/hide
Query:  NGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTE-QYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQ
        +G   RE+ RH ++E++ MC+ID+ VVD  K +       + DPR+ L+I D  A L+N  E  YD ++ D +DPI  GP  +L+ K F++ +V   L+ 
Subjt:  NGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTE-QYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQ

Query:  DGIFITQ
         G+  TQ
Subjt:  DGIFITQ

AT1G23820.2 spermidine synthase 14.5e-1437.38Show/hide
Query:  NGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTE-QYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQ
        +G   RE+ RH ++E++ MC+ID+ VVD  K +       + DPR+ L+I D  A L+N  E  YD ++ D +DPI  GP  +L+ K F++ +V   L+ 
Subjt:  NGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTE-QYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQ

Query:  DGIFITQ
         G+  TQ
Subjt:  DGIFITQ

AT1G70310.1 spermidine synthase 25.4e-1540.19Show/hide
Query:  NGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTE-QYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQ
        +G   RE+ RH +VE++ +C+ID+ VVD  K Y       + DPR+ LII D  A L+N  E  YD ++ D +DPI  GP  +L+ K F+E +V   L+ 
Subjt:  NGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTE-QYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQ

Query:  DGIFITQ
         G+  TQ
Subjt:  DGIFITQ

AT5G19530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein1.7e-4066.67Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GS ARE+L+H T+EKVVMCDID+EVVDFC+ +L VN +AF + +LEL+I DA+AELE R E++D+IVGDLADP+EGGPCY+LYTKSFY++ +KP+L  +G
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IF+TQ
Subjt:  IFITQ

AT5G19530.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein1.7e-4066.67Show/hide
Query:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG
        GS ARE+L+H T+EKVVMCDID+EVVDFC+ +L VN +AF + +LEL+I DA+AELE R E++D+IVGDLADP+EGGPCY+LYTKSFY++ +KP+L  +G
Subjt:  GSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQDG

Query:  IFITQ
        IF+TQ
Subjt:  IFITQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATGTTTCCTCTGCAAATTTGGTTAACAATGGCTCCACAGCAAGAGAGCTACTCCGACACAAGACAGTGGAGAAAGTTGTGATGTGCGATATCGACGAGGAAGT
TGTTGATTTCTGCAAGTCATATCTGATAGTAAACAAAGAAGCTTTCAGTGATCCAAGACTTGAACTTATCATAAACGATGCCAGAGCGGAGCTCGAGAACCGAACGGAGC
AATACGACGTGATCGTCGGCGATCTTGCTGACCCAATTGAGGGAGGTCCTTGTTATAAACTCTACACTAAGTCCTTCTATGAGCACACTGTGAAGCCTAGATTGAAACAA
GATGGCATATTCATCACTCAGGTATTTGTGGAAGATGAAAATGGAAGAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATGTTTCCTCTGCAAATTTGGTTAACAATGGCTCCACAGCAAGAGAGCTACTCCGACACAAGACAGTGGAGAAAGTTGTGATGTGCGATATCGACGAGGAAGT
TGTTGATTTCTGCAAGTCATATCTGATAGTAAACAAAGAAGCTTTCAGTGATCCAAGACTTGAACTTATCATAAACGATGCCAGAGCGGAGCTCGAGAACCGAACGGAGC
AATACGACGTGATCGTCGGCGATCTTGCTGACCCAATTGAGGGAGGTCCTTGTTATAAACTCTACACTAAGTCCTTCTATGAGCACACTGTGAAGCCTAGATTGAAACAA
GATGGCATATTCATCACTCAGGTATTTGTGGAAGATGAAAATGGAAGAACTTAA
Protein sequenceShow/hide protein sequence
MADVSSANLVNNGSTARELLRHKTVEKVVMCDIDEEVVDFCKSYLIVNKEAFSDPRLELIINDARAELENRTEQYDVIVGDLADPIEGGPCYKLYTKSFYEHTVKPRLKQ
DGIFITQVFVEDENGRT