; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17421 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17421
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCarg_Chr06:8824304..8824806
RNA-Seq ExpressionCarg17421
SyntenyCarg17421
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018711.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-5050.19Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----
        MPHRNLET NAYISNSVLHGR EDS IAFIE LR GGK DSI   AFLNA S+KLG   GCQLHGFIIRSGC QNVS+SNGLI FYGKCGEV CSE    
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----

Query:  -----------------MNGRAEEK---------------------------------------------------------------------------
                         +    EEK                                                                           
Subjt:  -----------------MNGRAEEK---------------------------------------------------------------------------

Query:  --MPVRNLVSWNTLLG-----GYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
          MP RNLVSWN LLG     GYADKAVALLEEMAS  G+AP+YVSLVCALSACSRAGDLK GMQIF
Subjt:  --MPVRNLVSWNTLLG-----GYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

KAG7028904.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-87100Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRA
        MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRA
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRA

Query:  EEKMPVRNLVSWNTLLGGYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
        EEKMPVRNLVSWNTLLGGYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
Subjt:  EEKMPVRNLVSWNTLLGGYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

XP_022956070.1 pentatricopeptide repeat-containing protein At4g14850 [Cucurbita moschata]2.8e-5049.81Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----
        MPHRNLET NAYISNSVLHGR EDS IAFIE LR GGK DSI   AFLNA S+KLG   GCQLHGFIIRSGC QNVS+SNGLI FYGKCGEV CSE    
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----

Query:  -----------------MNGRAEEK---------------------------------------------------------------------------
                         +    EEK                                                                           
Subjt:  -----------------MNGRAEEK---------------------------------------------------------------------------

Query:  --MPVRNLVSWNTLLG-----GYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
          MP RNLVSWN LLG     GYADKAVALL++MAS+ G+APSYVSLVCALSACSRAGDLK GMQIF
Subjt:  --MPVRNLVSWNTLLG-----GYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

XP_022979420.1 pentatricopeptide repeat-containing protein At4g14850 [Cucurbita maxima]7.3e-5150.94Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----
        MPHRNLET NAYISNSVLHGR EDS IAFIE LR GGK DSI   AFLNA S+KLG   GCQLHGFIIRSGC QNVS+SNGLI FYGKCGEV CSE    
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----

Query:  -------------------------------------------------------------------------------------MNG---------RAE
                                                                                             M G         RA 
Subjt:  -------------------------------------------------------------------------------------MNG---------RAE

Query:  EKMPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
         +MP RNLVSWN+LLGGY     ADKAVALLEEMAS  G+APSYVSLVCALSACSRAGDLK GMQIF
Subjt:  EKMPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

XP_038881355.1 pentatricopeptide repeat-containing protein At4g14850 [Benincasa hispida]2.1e-5050.56Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEM---
        MPHRNLETLNAYISNSVLHGR EDS IAFIE LRVG K DSI   AF NA S+KLG   GCQLHGFIIRSG  QNVSVSNGLI FYGKCGEVECSEM   
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEM---

Query:  ------------------NGRAEEK---------------------------------------------------------------------------
                              EEK                                                                           
Subjt:  ------------------NGRAEEK---------------------------------------------------------------------------

Query:  --MPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
          MP RNLVSWN LLGGY     ADKAVALLEEM S+ G++PSYVSLVCALSACSRAGDLK GMQIF
Subjt:  --MPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

TrEMBL top hitse value%identityAlignment
A0A0A0L4T8 Uncharacterized protein8.7e-5049.81Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEM---
        MPHRNLET NAYISNSVLHGR EDS IAFIE LRVGGK DSI   AFLNA S+KLG   GCQLHGFIIRSG  QNVSVSNGLI FYGKCGEVECSEM   
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEM---

Query:  ------------------NGRAEEK---------------------------------------------------------------------------
                              EEK                                                                           
Subjt:  ------------------NGRAEEK---------------------------------------------------------------------------

Query:  --MPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
          MP RNLVSWN LLGGY     A+KAVALLEEM S  G+ PSYVSL+CALSACSRAGDLK GM+IF
Subjt:  --MPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

A0A5A7U206 Pentatricopeptide repeat-containing protein1.8e-4748.31Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEM---
        MP RNLET NAYI+NSVLHGR EDS IAFIE LRVG K DSI   AFLNA S+KLG   GCQLHGF+IRSG  QNVSVSNGLI FYGKCGEVECSEM   
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEM---

Query:  ------------------NGRAEEK---------------------------------------------------------------------------
                              EEK                                                                           
Subjt:  ------------------NGRAEEK---------------------------------------------------------------------------

Query:  --MPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
          MP RNLVSWN LLGGY     A+KAVALLEEM S  G+ PSYVSL+CALSACSRAGDLK GM+IF
Subjt:  --MPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

A0A6J1C7M0 pentatricopeptide repeat-containing protein At4g148502.5e-4949.81Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECS-----
        MPHRNLET NAYISNSV HGR EDS IAF+E LR GG  DSI   AFLNA S+KLG   GCQLHGFIIRSG  QNVSVSNGLI FYGKCGEVECS     
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECS-----

Query:  ------------------------------------------------------------------------------------EMNG---------RAE
                                                                                            +M G         RA 
Subjt:  ------------------------------------------------------------------------------------EMNG---------RAE

Query:  EKMPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
        ++MP +NLVSWNTLLGGY     ADKAVALLEEM S  GMAPSYVSLVCALSACSRAGDLK GMQIF
Subjt:  EKMPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

A0A6J1GWT9 pentatricopeptide repeat-containing protein At4g148501.3e-5049.81Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----
        MPHRNLET NAYISNSVLHGR EDS IAFIE LR GGK DSI   AFLNA S+KLG   GCQLHGFIIRSGC QNVS+SNGLI FYGKCGEV CSE    
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----

Query:  -----------------MNGRAEEK---------------------------------------------------------------------------
                         +    EEK                                                                           
Subjt:  -----------------MNGRAEEK---------------------------------------------------------------------------

Query:  --MPVRNLVSWNTLLG-----GYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
          MP RNLVSWN LLG     GYADKAVALL++MAS+ G+APSYVSLVCALSACSRAGDLK GMQIF
Subjt:  --MPVRNLVSWNTLLG-----GYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

A0A6J1IQR6 pentatricopeptide repeat-containing protein At4g148503.5e-5150.94Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----
        MPHRNLET NAYISNSVLHGR EDS IAFIE LR GGK DSI   AFLNA S+KLG   GCQLHGFIIRSGC QNVS+SNGLI FYGKCGEV CSE    
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSE----

Query:  -------------------------------------------------------------------------------------MNG---------RAE
                                                                                             M G         RA 
Subjt:  -------------------------------------------------------------------------------------MNG---------RAE

Query:  EKMPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
         +MP RNLVSWN+LLGGY     ADKAVALLEEMAS  G+APSYVSLVCALSACSRAGDLK GMQIF
Subjt:  EKMPVRNLVSWNTLLGGY-----ADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

SwissProt top hitse value%identityAlignment
Q0WSH6 Pentatricopeptide repeat-containing protein At4g148501.0e-2333.21Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVH---GCQLHGFIIRSGCAQNVSVSNGLIAFYGKC--------
        +P RNLET NA+ISNSV  GR  ++  AFIE  R+ G  +SI   AFLNA S+   W+H   G QLHG ++RSG   +VSV NGLI FYGKC        
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVH---GCQLHGFIIRSGCAQNVSVSNGLIAFYGKC--------

Query:  ------------------------------------------------------------------------------------------GEVECSEMNG
                                                                                                  G+  C E + 
Subjt:  ------------------------------------------------------------------------------------------GEVECSEMNG

Query:  RAEEKMPVRNLVSWNTLLGGYA-----DKAVALLEEMASM-VGMAPSYVSLVCALSACSRAGDLKMGMQIF
        +A ++MP +NLV+ N+L+GGYA     D A+AL EEMA    G  P+Y++ V  LSACSRAG ++ GM+IF
Subjt:  RAEEKMPVRNLVSWNTLLGGYA-----DKAVALLEEMASM-VGMAPSYVSLVCALSACSRAGDLKMGMQIF

Q9CAA8 Putative pentatricopeptide repeat-containing protein At1g689302.3e-1533.33Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADS-IMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR
        M  +N+ +  A +      GRAE++   F++  R G   D   +   ++A +       G Q HG  I SG    V+VSN L+  YGKCG+++ S    R
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADS-IMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR

Query:  AEEKMPVRNLVSWNTLLGGYAD--KAVALLEEMASMV--GMAPSYVSLVCALSACSRAGDLKMGMQIF
           +M VR+ VSW  ++  YA   +AV  ++    MV  G+ P  V+L   +SACSRAG ++ G + F
Subjt:  AEEKMPVRNLVSWNTLLGGYAD--KAVALLEEMASMV--GMAPSYVSLVCALSACSRAGDLKMGMQIF

Q9LUJ2 Pentatricopeptide repeat-containing protein At3g226901.8e-1529.38Show/hide
Query:  NAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAF-LNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRAEEKMPVRN
        N+ I      G   ++ + F+  +  G   D     F L+A ++     +G Q+HG I++ G A+++ V N L+ FY +CGE++ +    +  ++M  RN
Subjt:  NAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAF-LNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRAEEKMPVRN

Query:  LVSWNTLLGGYADK-----AVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
        +VSW +++ GYA +     AV L   M     + P+ V++VC +SAC++  DL+ G +++
Subjt:  LVSWNTLLGGYADK-----AVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

Q9S7F4 Putative pentatricopeptide repeat-containing protein At2g015101.1e-1433.93Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKAD-SIMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR
        +P R   +  A IS  V  G        F +      +AD S  +  L A +     + G QLH FIIRSG  +NV   +GL+  Y KCG ++ +    +
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKAD-SIMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR

Query:  AEEKMPVRNLVSWNTLLGGYADK--AVALLEEMASMV--GMAPSYVSLVCALSACSRAGDLKMGMQIF
          E+MP RN VSWN L+  +AD     A +   A M+  G+ P  VS++  L+ACS  G ++ G + F
Subjt:  AEEKMPVRNLVSWNTLLGGYADK--AVALLEEMASMV--GMAPSYVSLVCALSACSRAGDLKMGMQIF

Q9XE98 Pentatricopeptide repeat-containing protein At4g043703.9e-1533.93Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAFLNAYSEKLG-WVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR
        +P++++      IS  +  GRAE + I F E L+ G    S   A + A   +LG +  G  +HG+++R G   +    N LI  Y KCG ++ S +   
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAFLNAYSEKLG-WVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR

Query:  AEEKMPVRNLVSWNTLLGGYAD-----KAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQI
          E+M  R+LVSWN ++ GYA      KA+ L EEM           ++V  L ACS AG L +G  I
Subjt:  AEEKMPVRNLVSWNTLLGGYAD-----KAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQI

Arabidopsis top hitse value%identityAlignment
AT1G68930.1 pentatricopeptide (PPR) repeat-containing protein1.6e-1633.33Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADS-IMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR
        M  +N+ +  A +      GRAE++   F++  R G   D   +   ++A +       G Q HG  I SG    V+VSN L+  YGKCG+++ S    R
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADS-IMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR

Query:  AEEKMPVRNLVSWNTLLGGYAD--KAVALLEEMASMV--GMAPSYVSLVCALSACSRAGDLKMGMQIF
           +M VR+ VSW  ++  YA   +AV  ++    MV  G+ P  V+L   +SACSRAG ++ G + F
Subjt:  AEEKMPVRNLVSWNTLLGGYAD--KAVALLEEMASMV--GMAPSYVSLVCALSACSRAGDLKMGMQIF

AT3G22690.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885)1.3e-1629.38Show/hide
Query:  NAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAF-LNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRAEEKMPVRN
        N+ I      G   ++ + F+  +  G   D     F L+A ++     +G Q+HG I++ G A+++ V N L+ FY +CGE++ +    +  ++M  RN
Subjt:  NAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAF-LNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRAEEKMPVRN

Query:  LVSWNTLLGGYADK-----AVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
        +VSW +++ GYA +     AV L   M     + P+ V++VC +SAC++  DL+ G +++
Subjt:  LVSWNTLLGGYADK-----AVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

AT3G22690.2 INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification1.3e-1629.38Show/hide
Query:  NAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAF-LNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRAEEKMPVRN
        N+ I      G   ++ + F+  +  G   D     F L+A ++     +G Q+HG I++ G A+++ V N L+ FY +CGE++ +    +  ++M  RN
Subjt:  NAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAF-LNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRAEEKMPVRN

Query:  LVSWNTLLGGYADK-----AVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF
        +VSW +++ GYA +     AV L   M     + P+ V++VC +SAC++  DL+ G +++
Subjt:  LVSWNTLLGGYADK-----AVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF

AT4G04370.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.8e-1633.93Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAFLNAYSEKLG-WVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR
        +P++++      IS  +  GRAE + I F E L+ G    S   A + A   +LG +  G  +HG+++R G   +    N LI  Y KCG ++ S +   
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAFLNAYSEKLG-WVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGR

Query:  AEEKMPVRNLVSWNTLLGGYAD-----KAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQI
          E+M  R+LVSWN ++ GYA      KA+ L EEM           ++V  L ACS AG L +G  I
Subjt:  AEEKMPVRNLVSWNTLLGGYAD-----KAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQI

AT4G14850.1 Pentatricopeptide repeat (PPR) superfamily protein7.3e-2533.21Show/hide
Query:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVH---GCQLHGFIIRSGCAQNVSVSNGLIAFYGKC--------
        +P RNLET NA+ISNSV  GR  ++  AFIE  R+ G  +SI   AFLNA S+   W+H   G QLHG ++RSG   +VSV NGLI FYGKC        
Subjt:  MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSI-MSAFLNAYSEKLGWVH---GCQLHGFIIRSGCAQNVSVSNGLIAFYGKC--------

Query:  ------------------------------------------------------------------------------------------GEVECSEMNG
                                                                                                  G+  C E + 
Subjt:  ------------------------------------------------------------------------------------------GEVECSEMNG

Query:  RAEEKMPVRNLVSWNTLLGGYA-----DKAVALLEEMASM-VGMAPSYVSLVCALSACSRAGDLKMGMQIF
        +A ++MP +NLV+ N+L+GGYA     D A+AL EEMA    G  P+Y++ V  LSACSRAG ++ GM+IF
Subjt:  RAEEKMPVRNLVSWNTLLGGYA-----DKAVALLEEMASM-VGMAPSYVSLVCALSACSRAGDLKMGMQIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCACCGAAACCTCGAGACGTTAAATGCGTATATATCCAATTCTGTGCTCCATGGGCGGGCTGAGGACTCTACCATTGCATTTATTGAGCCACTTCGAGTTGGTGG
GAAGGCAGATTCAATAATGTCTGCTTTTCTCAATGCGTATTCAGAGAAACTAGGCTGGGTGCATGGGTGTCAGCTACATGGGTTCATTATTCGAAGTGGGTGTGCGCAGA
ATGTCTCTGTTTCAAATGGGTTGATAGCTTTTTATGGGAAATGTGGGGAGGTTGAATGCTCTGAGATGAATGGGAGAGCGGAAGAGAAAATGCCTGTGAGAAACTTAGTG
TCTTGGAATACGTTGTTGGGCGGATACGCAGACAAGGCTGTGGCGTTGCTCGAGGAGATGGCATCGATGGTGGGCATGGCGCCGAGCTATGTAAGCTTGGTTTGTGCATT
ATCAGCTTGCAGTAGAGCAGGAGATTTGAAGATGGGGATGCAGATTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCACCGAAACCTCGAGACGTTAAATGCGTATATATCCAATTCTGTGCTCCATGGGCGGGCTGAGGACTCTACCATTGCATTTATTGAGCCACTTCGAGTTGGTGG
GAAGGCAGATTCAATAATGTCTGCTTTTCTCAATGCGTATTCAGAGAAACTAGGCTGGGTGCATGGGTGTCAGCTACATGGGTTCATTATTCGAAGTGGGTGTGCGCAGA
ATGTCTCTGTTTCAAATGGGTTGATAGCTTTTTATGGGAAATGTGGGGAGGTTGAATGCTCTGAGATGAATGGGAGAGCGGAAGAGAAAATGCCTGTGAGAAACTTAGTG
TCTTGGAATACGTTGTTGGGCGGATACGCAGACAAGGCTGTGGCGTTGCTCGAGGAGATGGCATCGATGGTGGGCATGGCGCCGAGCTATGTAAGCTTGGTTTGTGCATT
ATCAGCTTGCAGTAGAGCAGGAGATTTGAAGATGGGGATGCAGATTTTCTGA
Protein sequenceShow/hide protein sequence
MPHRNLETLNAYISNSVLHGRAEDSTIAFIEPLRVGGKADSIMSAFLNAYSEKLGWVHGCQLHGFIIRSGCAQNVSVSNGLIAFYGKCGEVECSEMNGRAEEKMPVRNLV
SWNTLLGGYADKAVALLEEMASMVGMAPSYVSLVCALSACSRAGDLKMGMQIF