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Carg17427 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17427
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF1677)
Genome locationCarg_Chr06:8804968..8805339
RNA-Seq ExpressionCarg17427
SyntenyCarg17427
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597437.1 hypothetical protein SDJN03_10617, partial [Cucurbita argyrosperma subsp. sororia]3.9e-5799.17Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
        ECCGL+EDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN

Query:  KYGRSKSSSQVGFDMSSLSLY
        KYGRSKSSSQVGFDMSSLSLY
Subjt:  KYGRSKSSSQVGFDMSSLSLY

KAG7028898.1 hypothetical protein SDJN02_10080, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-58100Show/hide
Query:  MLECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSS
        MLECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSS
Subjt:  MLECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSS

Query:  ANKYGRSKSSSQVGFDMSSLSLY
        ANKYGRSKSSSQVGFDMSSLSLY
Subjt:  ANKYGRSKSSSQVGFDMSSLSLY

XP_022934401.1 uncharacterized protein LOC111441587 [Cucurbita moschata]1.4e-57100Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
        ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN

Query:  KYGRSKSSSQVGFDMSSLSLY
        KYGRSKSSSQVGFDMSSLSLY
Subjt:  KYGRSKSSSQVGFDMSSLSLY

XP_022974390.1 uncharacterized protein LOC111473071 [Cucurbita maxima]1.4e-57100Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
        ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN

Query:  KYGRSKSSSQVGFDMSSLSLY
        KYGRSKSSSQVGFDMSSLSLY
Subjt:  KYGRSKSSSQVGFDMSSLSLY

XP_023540731.1 uncharacterized protein LOC111801010 [Cucurbita pepo subsp. pepo]3.0e-5799.17Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
        ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSS+ANSSAN
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN

Query:  KYGRSKSSSQVGFDMSSLSLY
        KYGRSKSSSQVGFDMSSLSLY
Subjt:  KYGRSKSSSQVGFDMSSLSLY

TrEMBL top hitse value%identityAlignment
A0A1S3AWX5 uncharacterized protein LOC1034837011.2e-4888.52Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVG-LEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSA
        +CCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVG LEEAV+AHMSFCRKFK+NPA+RVADG+RLMLRRRSSDVS+SS SSS   SSA
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVG-LEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSA

Query:  NKYGRSKSSSQVGFDMSSLSLY
         KY RS SSSQVGFDMSSLSLY
Subjt:  NKYGRSKSSSQVGFDMSSLSLY

A0A5A7U0I4 Uncharacterized protein1.2e-4888.52Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVG-LEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSA
        +CCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVG LEEAV+AHMSFCRKFK+NPA+RVADG+RLMLRRRSSDVS+SS SSS   SSA
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVG-LEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSA

Query:  NKYGRSKSSSQVGFDMSSLSLY
         KY RS SSSQVGFDMSSLSLY
Subjt:  NKYGRSKSSSQVGFDMSSLSLY

A0A6J1F1Q0 uncharacterized protein LOC1114415876.6e-58100Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
        ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN

Query:  KYGRSKSSSQVGFDMSSLSLY
        KYGRSKSSSQVGFDMSSLSLY
Subjt:  KYGRSKSSSQVGFDMSSLSLY

A0A6J1GVH2 uncharacterized protein LOC1114578079.5e-4988.33Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
        +CCGLKEDCTQ YISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAV+AHMSFCRKFK+NPA+RVADG+RLMLRRRSSD+SASSSSS    SS+ 
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN

Query:  KYGRSKSSSQVGFDMSSLSL
        KYGRS SSSQVGFDMSSLSL
Subjt:  KYGRSKSSSQVGFDMSSLSL

A0A6J1IDB2 uncharacterized protein LOC1114730716.6e-58100Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
        ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN

Query:  KYGRSKSSSQVGFDMSSLSLY
        KYGRSKSSSQVGFDMSSLSLY
Subjt:  KYGRSKSSSQVGFDMSSLSLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72510.1 Protein of unknown function (DUF1677)5.6e-1747.06Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKA-----NPAIRVADGIRLMLRR
        +CCGL E+CTQ YI  V+ ++ GKW+CGLCSEAV+ E  R+K+ L+  EEA+  HM+ C KFK+     NP   +   +R +LR+
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKA-----NPAIRVADGIRLMLRR

AT1G72510.2 Protein of unknown function (DUF1677)5.6e-1747.06Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKA-----NPAIRVADGIRLMLRR
        +CCGL E+CTQ YI  V+ ++ GKW+CGLCSEAV+ E  R+K+ L+  EEA+  HM+ C KFK+     NP   +   +R +LR+
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKA-----NPAIRVADGIRLMLRR

AT1G79770.1 Protein of unknown function (DUF1677)2.1e-1646.08Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKF----KANPAIRVADGIRLMLRRRSSDVSASSSSSSQAN
        ECCG++E+CT  YI  V+ KF GKW+CGLCSEAV++E  R K+   GLE A+  HMS C +F    +  PA+  AD +R MLRR +   S     +    
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKF----KANPAIRVADGIRLMLRRRSSDVSASSSSSSQAN

Query:  SS
        SS
Subjt:  SS

AT3G22540.1 Protein of unknown function (DUF1677)9.1e-2861.76Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKA-NPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSA
        ECCGL EDCTQ YISEVK+ F+ KWLCGLCSEAVRDE  R K  +  ++EAV AH+SFC KFK  NPA+ VADG+R MLRRRS +++ SS+S     S+ 
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKA-NPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSA

Query:  NK
         K
Subjt:  NK

AT4G14819.1 Protein of unknown function (DUF1677)1.4e-2862.04Show/hide
Query:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN
        ECCGL EDCTQ YIS+VKA F GKWLCGLCSEAV DE  RS K    +EEAV+AHMSFC KF ANPA  VADG+R MLRRRS ++S   S          
Subjt:  ECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSAN

Query:  KYGRSKSS
        K+GRS ++
Subjt:  KYGRSKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGAATGCTGTGGGCTGAAAGAGGACTGCACCCAATTCTATATCAGCGAAGTTAAGGCGAAATTTGAAGGGAAATGGCTGTGTGGGCTTTGCTCGGAGGCTGTTAG
AGACGAAGCTAAGCGAAGCAAGAAGCCATTGGTGGGCTTGGAAGAAGCTGTCGATGCCCACATGTCGTTTTGTCGTAAATTCAAAGCTAACCCTGCGATTCGTGTCGCTG
ATGGAATTAGGCTCATGCTTAGGAGGAGGTCCAGCGACGTGTCGGCTTCTTCCTCTTCTTCTTCTCAGGCTAATTCTTCTGCTAACAAGTATGGAAGATCCAAGAGCTCG
TCCCAGGTGGGATTCGACATGTCGTCGCTGTCGTTGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGAATGCTGTGGGCTGAAAGAGGACTGCACCCAATTCTATATCAGCGAAGTTAAGGCGAAATTTGAAGGGAAATGGCTGTGTGGGCTTTGCTCGGAGGCTGTTAG
AGACGAAGCTAAGCGAAGCAAGAAGCCATTGGTGGGCTTGGAAGAAGCTGTCGATGCCCACATGTCGTTTTGTCGTAAATTCAAAGCTAACCCTGCGATTCGTGTCGCTG
ATGGAATTAGGCTCATGCTTAGGAGGAGGTCCAGCGACGTGTCGGCTTCTTCCTCTTCTTCTTCTCAGGCTAATTCTTCTGCTAACAAGTATGGAAGATCCAAGAGCTCG
TCCCAGGTGGGATTCGACATGTCGTCGCTGTCGTTGTACTGA
Protein sequenceShow/hide protein sequence
MLECCGLKEDCTQFYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVDAHMSFCRKFKANPAIRVADGIRLMLRRRSSDVSASSSSSSQANSSANKYGRSKSS
SQVGFDMSSLSLY