; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17428 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17428
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionfolate-biopterin transporter 1, chloroplastic-like
Genome locationCarg_Chr06:8800628..8801204
RNA-Seq ExpressionCarg17428
SyntenyCarg17428
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039309 - Biopterin transporter family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028897.1 Folate-biopterin transporter 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-69100Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVGLYNGFLKKVPLR
        LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVGLYNGFLKKVPLR
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVGLYNGFLKKVPLR

Query:  KIFLVTTIFGCALGMSQVFDMIETFHQFLSVFHTLLSSD
        KIFLVTTIFGCALGMSQVFDMIETFHQFLSVFHTLLSSD
Subjt:  KIFLVTTIFGCALGMSQVFDMIETFHQFLSVFHTLLSSD

XP_008438656.1 PREDICTED: folate-biopterin transporter 1, chloroplastic-like isoform X1 [Cucumis melo]3.3e-5286.92Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
        LPLITS+VAVLVKEQPVRGINRPSANY FLRSSR+HVVELWGAVSQRN            ATPQSDSAMFFFTTNKLGFTPEFLGRVK VTSIASL+GVG
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG

Query:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
        LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
Subjt:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV

XP_022934360.1 folate-biopterin transporter 1, chloroplastic-like [Cucurbita moschata]1.2e-5490.77Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
        LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN            ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG

Query:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
        LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
Subjt:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV

XP_022974385.1 folate-biopterin transporter 1, chloroplastic-like [Cucurbita maxima]7.9e-5489.23Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
        LPLITSLVAVLVKEQPVRG+NRPSANYAFLRSSRKHVVELWGAV QRN            ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG

Query:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
        LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
Subjt:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV

XP_023540227.1 folate-biopterin transporter 1, chloroplastic-like [Cucurbita pepo subsp. pepo]1.2e-5490.77Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
        LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN            ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG

Query:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
        LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
Subjt:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV

TrEMBL top hitse value%identityAlignment
A0A1S3AWK4 folate-biopterin transporter 1, chloroplastic-like isoform X11.6e-5286.92Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
        LPLITS+VAVLVKEQPVRGINRPSANY FLRSSR+HVVELWGAVSQRN            ATPQSDSAMFFFTTNKLGFTPEFLGRVK VTSIASL+GVG
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG

Query:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
        LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
Subjt:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV

A0A1S3AX13 folate-biopterin transporter 1, chloroplastic-like isoform X21.6e-5286.92Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
        LPLITS+VAVLVKEQPVRGINRPSANY FLRSSR+HVVELWGAVSQRN            ATPQSDSAMFFFTTNKLGFTPEFLGRVK VTSIASL+GVG
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG

Query:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
        LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
Subjt:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV

A0A5D3D2Z6 Folate-biopterin transporter 13.6e-5286.15Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
        LPLITS+VAVLVKEQPVRGINRPSANY FLRSS++HVVELWGAVSQRN            ATPQSDSAMFFFTTNKLGFTPEFLGRVK VTSIASL+GVG
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG

Query:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
        LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
Subjt:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV

A0A6J1F7G4 folate-biopterin transporter 1, chloroplastic-like5.9e-5590.77Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
        LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN            ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG

Query:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
        LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
Subjt:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV

A0A6J1IDT7 folate-biopterin transporter 1, chloroplastic-like3.8e-5489.23Show/hide
Query:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
        LPLITSLVAVLVKEQPVRG+NRPSANYAFLRSSRKHVVELWGAV QRN            ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG
Subjt:  LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVG

Query:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
        LYNGFLKKVPLRKIFLVTTIFGCALGMSQV
Subjt:  LYNGFLKKVPLRKIFLVTTIFGCALGMSQV

SwissProt top hitse value%identityAlignment
F4KIL8 Probable folate-biopterin transporter 54.5e-0429.69Show/hide
Query:  ITSLVAVLVKEQPVRGI-------NRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLG--FTPEFLGRVKFVTSIASLIGVGLYNGFL
        + S+V VL  E  V G        N   A +  ++ S      L+  +++       +   ++FT +K G  F  E +G +  + SI S++GV LYN  L
Subjt:  ITSLVAVLVKEQPVRGI-------NRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLG--FTPEFLGRVKFVTSIASLIGVGLYNGFL

Query:  KKVPLRKIFLVTTIFGCALGMSQVFDMI
        K  P RK+FL T +      +S +FD+I
Subjt:  KKVPLRKIFLVTTIFGCALGMSQVFDMI

Q55721 Folate-biopterin transporter2.6e-1548.31Show/hide
Query:  LWGAVSQR------------NATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVGLYNGFLKKVPLRKIFLVTTIFGCALGMS
        +W AV Q+             ATP ++SA F+FTTN+LGF P+FLGRV+ VTS+A LIGVGLY  FLK +P R I   +T+    LG++
Subjt:  LWGAVSQR------------NATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVGLYNGFLKKVPLRKIFLVTTIFGCALGMS

Q9SKZ5 Folate-biopterin transporter 1, chloroplastic1.2e-3659.06Show/hide
Query:  LPLITSLVAVLVKEQPV------RGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIA
        LPLITS VAVLV EQ V      +  N    +  FL++S++++++LWGA+ Q N            ATP SDSAMF+FTTNKLGFTPEFLGRVK VTSIA
Subjt:  LPLITSLVAVLVKEQPV------RGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIA

Query:  SLIGVGLYNGFLKKVPLRKIFLVTTIFGCALGMSQVFDMIETFHQFLSV
        SL+GVGLYNGFLK VPLRKIFLVTTIFG  LGM+QV  ++  F++ L +
Subjt:  SLIGVGLYNGFLKKVPLRKIFLVTTIFGCALGMSQVFDMIETFHQFLSV

Arabidopsis top hitse value%identityAlignment
AT2G32040.1 Major facilitator superfamily protein8.4e-3859.06Show/hide
Query:  LPLITSLVAVLVKEQPV------RGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIA
        LPLITS VAVLV EQ V      +  N    +  FL++S++++++LWGA+ Q N            ATP SDSAMF+FTTNKLGFTPEFLGRVK VTSIA
Subjt:  LPLITSLVAVLVKEQPV------RGINRPSANYAFLRSSRKHVVELWGAVSQRN------------ATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIA

Query:  SLIGVGLYNGFLKKVPLRKIFLVTTIFGCALGMSQVFDMIETFHQFLSV
        SL+GVGLYNGFLK VPLRKIFLVTTIFG  LGM+QV  ++  F++ L +
Subjt:  SLIGVGLYNGFLKKVPLRKIFLVTTIFGCALGMSQVFDMIETFHQFLSV

AT5G25040.1 Major facilitator superfamily protein3.2e-0529.69Show/hide
Query:  ITSLVAVLVKEQPVRGI-------NRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLG--FTPEFLGRVKFVTSIASLIGVGLYNGFL
        + S+V VL  E  V G        N   A +  ++ S      L+  +++       +   ++FT +K G  F  E +G +  + SI S++GV LYN  L
Subjt:  ITSLVAVLVKEQPVRGI-------NRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLG--FTPEFLGRVKFVTSIASLIGVGLYNGFL

Query:  KKVPLRKIFLVTTIFGCALGMSQVFDMI
        K  P RK+FL T +      +S +FD+I
Subjt:  KKVPLRKIFLVTTIFGCALGMSQVFDMI

AT5G25040.3 Major facilitator superfamily protein3.2e-0529.69Show/hide
Query:  ITSLVAVLVKEQPVRGI-------NRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLG--FTPEFLGRVKFVTSIASLIGVGLYNGFL
        + S+V VL  E  V G        N   A +  ++ S      L+  +++       +   ++FT +K G  F  E +G +  + SI S++GV LYN  L
Subjt:  ITSLVAVLVKEQPVRGI-------NRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLG--FTPEFLGRVKFVTSIASLIGVGLYNGFL

Query:  KKVPLRKIFLVTTIFGCALGMSQVFDMI
        K  P RK+FL T +      +S +FD+I
Subjt:  KKVPLRKIFLVTTIFGCALGMSQVFDMI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGCCATTGATAACATCTTTGGTGGCAGTTCTTGTAAAAGAGCAACCTGTGCGAGGGATAAATCGTCCTTCAGCTAACTATGCTTTTCTCCGGAGCTCAAGAAAGCACGT
TGTTGAATTGTGGGGTGCTGTTAGTCAAAGAAATGCAACACCACAATCAGATTCTGCCATGTTTTTCTTCACTACAAATAAACTTGGATTCACTCCCGAATTTCTCGGGC
GTGTCAAGTTTGTTACATCGATAGCATCACTGATTGGCGTTGGGCTTTATAATGGATTTCTCAAGAAAGTTCCTCTTAGGAAAATTTTTCTTGTAACCACCATTTTTGGT
TGTGCACTTGGAATGAGTCAGGTCTTTGATATGATAGAAACATTTCACCAGTTCTTGTCTGTGTTCCATACATTATTATCTAGTGACTAA
mRNA sequenceShow/hide mRNA sequence
CTGCCATTGATAACATCTTTGGTGGCAGTTCTTGTAAAAGAGCAACCTGTGCGAGGGATAAATCGTCCTTCAGCTAACTATGCTTTTCTCCGGAGCTCAAGAAAGCACGT
TGTTGAATTGTGGGGTGCTGTTAGTCAAAGAAATGCAACACCACAATCAGATTCTGCCATGTTTTTCTTCACTACAAATAAACTTGGATTCACTCCCGAATTTCTCGGGC
GTGTCAAGTTTGTTACATCGATAGCATCACTGATTGGCGTTGGGCTTTATAATGGATTTCTCAAGAAAGTTCCTCTTAGGAAAATTTTTCTTGTAACCACCATTTTTGGT
TGTGCACTTGGAATGAGTCAGGTCTTTGATATGATAGAAACATTTCACCAGTTCTTGTCTGTGTTCCATACATTATTATCTAGTGACTAA
Protein sequenceShow/hide protein sequence
LPLITSLVAVLVKEQPVRGINRPSANYAFLRSSRKHVVELWGAVSQRNATPQSDSAMFFFTTNKLGFTPEFLGRVKFVTSIASLIGVGLYNGFLKKVPLRKIFLVTTIFG
CALGMSQVFDMIETFHQFLSVFHTLLSSD