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Carg17438 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17438
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionc-Myc-binding protein homolog
Genome locationCarg_Chr12:10882534..10885814
RNA-Seq ExpressionCarg17438
SyntenyCarg17438
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR026060 - Associate of Myc 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586333.1 c-Myc-binding protein, partial [Cucurbita argyrosperma subsp. sororia]2.2e-54100Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

KAG7021180.1 C-Myc-binding protein [Cucurbita argyrosperma subsp. argyrosperma]2.2e-54100Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

XP_022938294.1 c-Myc-binding protein homolog [Cucurbita moschata]4.2e-5398.26Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKS HNVT M
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

XP_022965975.1 c-Myc-binding protein homolog [Cucurbita maxima]5.7e-5093.91Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSIAEYE+LQSEMADLQVKYDELLATHKETCKEL GL+SSHNVT  
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDEEENDKV
        S KDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

XP_023537914.1 c-Myc-binding protein homolog [Cucurbita pepo subsp. pepo]2.7e-5297.39Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVT  
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

TrEMBL top hitse value%identityAlignment
A0A1S3C377 c-Myc-binding protein homolog2.0e-4889.57Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        MGH +EKEAKKEAFRKYLESNG+VDALTKVLVAL+EQ+DKPSSALEFIQQRLGGPS AEYEKLQSEMADLQVKYDELLATHKETCKELE LKSSHN+T  
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDEEENDKV
        STKDTTDDE+ENDK+
Subjt:  STKDTTDDEEENDKV

A0A5A7V8R5 c-Myc-binding protein-like protein8.3e-4790.99Show/hide
Query:  QEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTMSTKD
        QEKEAKKEAFRKYLESNG+VDALTKVLVAL+EQ+DKPSSALEFIQQRLGGPS AEYEKLQSEMADLQVKYDELLATHKETCKELE LKSSHN+T  STKD
Subjt:  QEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTMSTKD

Query:  TTDDEEENDKV
        TTDDE+ENDK+
Subjt:  TTDDEEENDKV

A0A6J1CPJ0 c-Myc-binding protein homolog1.6e-4584.35Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        MGH +EKEAKKEAFRKYLESNGVVDA TKVLVAL+EQ+DKPSSALEFIQQRLGGPS+AEYEKLQSE+ADL+VKYDELL+THKETCKELE LKSSHNV   
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDEEENDKV
        ST+DTTD E++NDK+
Subjt:  STKDTTDDEEENDKV

A0A6J1FDN0 c-Myc-binding protein homolog2.0e-5398.26Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKS HNVT M
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

A0A6J1HQ97 c-Myc-binding protein homolog2.8e-5093.91Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSIAEYE+LQSEMADLQVKYDELLATHKETCKEL GL+SSHNVT  
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDEEENDKV
        S KDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

SwissProt top hitse value%identityAlignment
Q2TBP7 c-Myc-binding protein3.1e-1444.71Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE
        M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+ ++  +K+
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE

Q54I57 c-Myc-binding protein homolog9.9e-1346.43Show/hide
Query:  EKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELE
        +  A+KE F+ YLE +GV+DALTKVLV L+E+ DKPS ALEFI++ LG     + + L+ E ADL+ +   L     +  K+LE
Subjt:  EKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELE

Q5R7A8 c-Myc-binding protein3.1e-1444.71Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE
        M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+ ++  +K+
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE

Q99417 c-Myc-binding protein3.1e-1444.71Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE
        M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+ ++  +K+
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE

Q9EQS3 c-Myc-binding protein6.8e-1444.71Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE
        M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+  +  +K+
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE

Arabidopsis top hitse value%identityAlignment
AT2G14045.1 unknown protein2.1e-3466.97Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQ+DKPSSALEFIQQ+LGGPS+++YEKLQ+E +DLQ+KY+ELLA H+ET +EL G+KS H  +  
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDE
        S+KD  D E
Subjt:  STKDTTDDE

AT2G14045.2 unknown protein2.1e-3466.97Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM
        M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQ+DKPSSALEFIQQ+LGGPS+++YEKLQ+E +DLQ+KY+ELLA H+ET +EL G+KS H  +  
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTM

Query:  STKDTTDDE
        S+KD  D E
Subjt:  STKDTTDDE

AT2G14045.3 unknown protein4.7e-2673.97Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVK
        M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQ+DKPSSALEFIQQ+LGGPS+++YEKLQ+E +DLQ+K
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCA
ACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGT
ATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGAAGGACTTAAAAGTTCGCATAACGTCACGACAATGTCTACCAAGGATACCACTGATGACGAGGAG
GAAAACGATAAGGTATGA
mRNA sequenceShow/hide mRNA sequence
CGAAACTCACGATCATGGGCCACGGTGATCGAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGG
ATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCATTTCTTCCCCATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTA
GGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGA
CTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTT
GGAAGGACTTAAAAGTTCGCATAACGTCACGACAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGGCTAATTGAGTTGCACATAGGA
GGTTGATGGATTTTCTATATGACAGCCAAGAAAAAGAAAGTGATATCTATTTCCTTTAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTATGAAG
ATCATTCATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCGCTTTAGTTCTAGTTTTGGTGTGATGTTTTTAGTGTACATTCGAAAATGAAACGG
AAAACGTGCATGTGCCATGGAAAGAACATAACTATAATCTCCTTTGCTGAAACTCTCATGGAACAGCTTAAGCCCACTGCTAGCAAATATTATCCTCGTTGGGTTTTCCC
TTTCATGTTTCCTCTAAAGGTTTTTAAAACGTGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCC
Protein sequenceShow/hide protein sequence
MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTMSTKDTTDDEE
ENDKV