; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17455 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17455
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type domain-containing protein
Genome locationCarg_Chr12:11020414..11022907
RNA-Seq ExpressionCarg17455
SyntenyCarg17455
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586351.1 putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subsp. sororia]5.2e-7987.1Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS
        MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSS          Q+EKLGQAAREAKERLDE           RKKSS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS

Query:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
        SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHS CL+PWLQANADCPCCRYPVLAQ
Subjt:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ

KAG7021197.1 putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-91100Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDERKKSSSEEVGLKKEKA
        MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDERKKSSSEEVGLKKEKA
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDERKKSSSEEVGLKKEKA

Query:  KGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
        KGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
Subjt:  KGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ

XP_022938062.1 E3 ubiquitin-protein ligase ZNRF3-like isoform X1 [Cucurbita moschata]4.0e-8792.47Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS
        MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE           RKKSS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS

Query:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
        SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRA EPLVHLPCAHKFHSACLVPWLQANA CPCCRYP+LAQ
Subjt:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ

XP_022965966.1 probable E3 ubiquitin-protein ligase RHY1A isoform X1 [Cucurbita maxima]5.0e-8287.63Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS
        MAGMLPGVECARRRRFHQSITSS+SASTAAKLGSTRRSSFCLY SNRDFHLTSSSSQQRCSSNHAYQ+EKLGQAAREAKERLDE           R KSS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS

Query:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
        SEEV LKKE  KGKEETTTKKRF WGKLMKWKASEQEECTVCLE+FRAAEPLVHLPCAHKFHS CLVPWLQANA CPCCRYP+LAQ
Subjt:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ

XP_023538036.1 probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]8.3e-8589.78Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS
        MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLY SNRDFHLTSSSSQQRCSSNHAYQ+EKLGQAAREAKERLDE           RKKSS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS

Query:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
        SEEVGLKKEKAKGKEETTTKKRF WGKLMKWKASEQEECTVCLE+FRA EPLVHLPCAHKFHS CLVPWLQANA CPCCRYP+LAQ
Subjt:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ

TrEMBL top hitse value%identityAlignment
A0A6J1FC43 probable E3 ubiquitin-protein ligase RHY1A isoform X27.3e-7987.1Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS
        MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSS          QDEKLGQAAREAKERLDE           RKKSS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS

Query:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
        SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRA EPLVHLPCAHKFHSACLVPWLQANA CPCCRYP+LAQ
Subjt:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ

A0A6J1FHS8 E3 ubiquitin-protein ligase ZNRF3-like isoform X11.9e-8792.47Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS
        MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE           RKKSS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS

Query:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
        SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRA EPLVHLPCAHKFHSACLVPWLQANA CPCCRYP+LAQ
Subjt:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ

A0A6J1G4D6 probable E3 ubiquitin-protein ligase RHY1A2.5e-6678.16Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSS--SQQRCSSNHAYQDEKLGQAAREAKERLDERKKSSSEEVGLKKE
        MAGMLPGVECARRRRFHQSITSSD+ STAAKLGSTRR SFCLY SNRDFH+TSSS  SQQR SS+ AYQ+EKLG+ AREAKERLDER ++  +    +K+
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSS--SQQRCSSNHAYQDEKLGQAAREAKERLDERKKSSSEEVGLKKE

Query:  KAKG-KEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYP
          +G KEE+ TKKRF WGKLMKWKASEQEEC VCLE FRA EPLVHLPCAHKFHSACLVPWLQ NA CPCCR+P
Subjt:  KAKG-KEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYP

A0A6J1HQI5 probable E3 ubiquitin-protein ligase RHY1A isoform X12.4e-8287.63Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS
        MAGMLPGVECARRRRFHQSITSS+SASTAAKLGSTRRSSFCLY SNRDFHLTSSSSQQRCSSNHAYQ+EKLGQAAREAKERLDE           R KSS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS

Query:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
        SEEV LKKE  KGKEETTTKKRF WGKLMKWKASEQEECTVCLE+FRAAEPLVHLPCAHKFHS CLVPWLQANA CPCCRYP+LAQ
Subjt:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ

A0A6J1HSD8 probable E3 ubiquitin-protein ligase RHY1A isoform X29.3e-7482.26Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS
        MAGMLPGVECARRRRFHQSITSS+SASTAAKLGSTRRSSFCLY SNRDFHLTSSSS          Q+EKLGQAAREAKERLDE           R KSS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDE-----------RKKSS

Query:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ
        SEEV LKKE  KGKEETTTKKRF WGKLMKWKASEQEECTVCLE+FRAAEPLVHLPCAHKFHS CLVPWLQANA CPCCRYP+LAQ
Subjt:  SEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ

SwissProt top hitse value%identityAlignment
Q08D68 E3 ubiquitin-protein ligase ZNRF36.5e-0832.08Show/hide
Query:  KLGQAAREAKERLDERKKSSSEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR
        K+    R ++  ++     + E++  +K KAKGK      +    G L    +S   +C +CLEK+   E L  +PC H+FH  C+ PWL  N  CP CR
Subjt:  KLGQAAREAKERLDERKKSSSEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR

Query:  YPVLAQ
        + ++ Q
Subjt:  YPVLAQ

Q4KLR8 E3 ubiquitin-protein ligase ZNRF38.5e-0832.08Show/hide
Query:  KLGQAAREAKERLDERKKSSSEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR
        K+    R ++  ++     + E++  +K KAKGK      +    G L    +S   +C +CLEK+   E L  +PC H+FH  C+ PWL  N  CP CR
Subjt:  KLGQAAREAKERLDERKKSSSEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR

Query:  YPVLAQ
        + ++ Q
Subjt:  YPVLAQ

Q852U6 Probable E3 ubiquitin-protein ligase RHY1A3.3e-1257.45Show/hide
Query:  SEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR
        SE  +C++CLE F   + L+ LPC H FHS+CL PWL+A  DCPCCR
Subjt:  SEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR

Q9C1X4 Uncharacterized RING finger protein P32A8.03c1.2e-0946.94Show/hide
Query:  EQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPV
        E+ ECT+C+E F+  + ++ LPC H FH  C+ PWL+ N  C  CR PV
Subjt:  EQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPV

Q9ULT6 E3 ubiquitin-protein ligase ZNRF32.5e-0731.93Show/hide
Query:  QQRCSSNHAYQDEKLGQAAREAKERLDERKKSSSEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLV
        +QR S N       + + A +A E+++ RK +S         K+KG+ E +       G L    +S   +C +CLEK+   E L  +PC H+FH  C+ 
Subjt:  QQRCSSNHAYQDEKLGQAAREAKERLDERKKSSSEEVGLKKEKAKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLV

Query:  PWLQANADCPCCRYPVLAQ
        PWL  +  CP CR+ ++ Q
Subjt:  PWLQANADCPCCRYPVLAQ

Arabidopsis top hitse value%identityAlignment
AT1G49850.1 RING/U-box superfamily protein2.4e-1357.45Show/hide
Query:  SEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR
        SE  +C++CLE F   + L+ LPC H FHS+CL PWL+A  DCPCCR
Subjt:  SEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR

AT1G55530.1 RING/U-box superfamily protein1.4e-1046.3Show/hide
Query:  KASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLA
        K  E  +C+VCL+ F        +PC HKFHS CL+PWL+ ++ CP CRY + A
Subjt:  KASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLA

AT2G15580.1 RING/U-box superfamily protein9.3e-3447.67Show/hide
Query:  MAGMLPGVECARRRRFH---QSITSSDSASTAAKLGS--TRRSSFCLYASNRDFHLTSSSSQQRCSSNHAY---QDEKLGQAAREAKERLDE------RK
        MAGMLPGVECARRRRFH     I SS++AS AA  G   TRR SF LY +N + H    S  +R   N +Y    DEKL  AA+EAK+RL++      R 
Subjt:  MAGMLPGVECARRRRFH---QSITSSDSASTAAKLGS--TRRSSFCLYASNRDFHLTSSSSQQRCSSNHAY---QDEKLGQAAREAKERLDE------RK

Query:  KSSSEEVGLKKEKAKGK-------EETTTKKRFGWGKLMKW---KASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR
        + + ++ G K E+ KGK       E    KK    G+LM+W   +  EQ++C +CL++F+  E LVHLPCAHKFHS CL+PWL  N  CP CR
Subjt:  KSSSEEVGLKKEKAKGK-------EETTTKKRFGWGKLMKW---KASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCR

AT2G15580.2 RING/U-box superfamily protein1.2e-1249.09Show/hide
Query:  MAGMLPGVECARRRRFH---QSITSSDSASTAAKLGS--TRRSSFCLYASNRDFHLTSSSSQQRCSSNHAY---QDEKLGQAAREAKERLDERKKSSSEE
        MAGMLPGVECARRRRFH     I SS++AS AA  G   TRR SF LY +N + H    S  +R   N +Y    DEKL  AA+EAK+RL++R +     
Subjt:  MAGMLPGVECARRRRFH---QSITSSDSASTAAKLGS--TRRSSFCLYASNRDFHLTSSSSQQRCSSNHAY---QDEKLGQAAREAKERLDERKKSSSEE

Query:  VGLKKEKAKG
           K  K KG
Subjt:  VGLKKEKAKG

AT4G26400.2 RING/U-box superfamily protein1.4e-1046Show/hide
Query:  KASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRY
        K SE  +C++CL+ F        +PC HKFH  C+VPWL+ ++ CP CRY
Subjt:  KASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGAATGTTGCCTGGAGTTGAATGCGCGAGACGGCGGCGGTTCCACCAGAGCATAACGTCATCGGACTCGGCGTCCACGGCGGCGAAATTAGGATCCACAAGAAG
GTCCTCCTTCTGTTTGTATGCAAGCAACCGTGATTTCCACCTCACTTCATCTTCTTCACAGCAACGGTGCTCTTCGAATCACGCTTACCAGGACGAGAAGCTTGGGCAAG
CTGCAAGAGAAGCTAAGGAACGGTTGGATGAGAGGAAGAAGAGTAGTAGTGAAGAAGTAGGGTTGAAGAAGGAGAAAGCGAAGGGAAAGGAAGAAACAACAACGAAGAAG
AGGTTCGGTTGGGGGAAGCTAATGAAATGGAAAGCCTCCGAACAGGAAGAGTGCACTGTTTGTCTCGAAAAGTTCAGAGCGGCCGAGCCACTAGTCCATCTTCCATGCGC
TCACAAGTTCCACTCCGCCTGTTTGGTCCCTTGGCTCCAAGCTAATGCTGATTGTCCTTGTTGTAGGTACCCTGTTCTCGCTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGAATGTTGCCTGGAGTTGAATGCGCGAGACGGCGGCGGTTCCACCAGAGCATAACGTCATCGGACTCGGCGTCCACGGCGGCGAAATTAGGATCCACAAGAAG
GTCCTCCTTCTGTTTGTATGCAAGCAACCGTGATTTCCACCTCACTTCATCTTCTTCACAGCAACGGTGCTCTTCGAATCACGCTTACCAGGACGAGAAGCTTGGGCAAG
CTGCAAGAGAAGCTAAGGAACGGTTGGATGAGAGGAAGAAGAGTAGTAGTGAAGAAGTAGGGTTGAAGAAGGAGAAAGCGAAGGGAAAGGAAGAAACAACAACGAAGAAG
AGGTTCGGTTGGGGGAAGCTAATGAAATGGAAAGCCTCCGAACAGGAAGAGTGCACTGTTTGTCTCGAAAAGTTCAGAGCGGCCGAGCCACTAGTCCATCTTCCATGCGC
TCACAAGTTCCACTCCGCCTGTTTGGTCCCTTGGCTCCAAGCTAATGCTGATTGTCCTTGTTGTAGGTACCCTGTTCTCGCTCAATAA
Protein sequenceShow/hide protein sequence
MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHLTSSSSQQRCSSNHAYQDEKLGQAAREAKERLDERKKSSSEEVGLKKEKAKGKEETTTKK
RFGWGKLMKWKASEQEECTVCLEKFRAAEPLVHLPCAHKFHSACLVPWLQANADCPCCRYPVLAQ