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Carg17470 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17470
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTemperature-induced lipocalin-1-like
Genome locationCarg_Chr12:11108814..11109952
RNA-Seq ExpressionCarg17470
SyntenyCarg17470
Gene Ontology termsNA
InterPro domainsIPR000566 - Lipocalin/cytosolic fatty-acid binding domain
IPR012674 - Calycin
IPR022272 - Lipocalin family conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2309866.1 hypothetical protein GH714_005420 [Hevea brasiliensis]5.8e-4572.44Show/hide
Query:  AKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGD---HGLM-----AREGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTT
        +KK ME +KGVDL+RYMGRWYEIASFPSRFQP+NG NTRATYTL  D   H L       + G + ILCR+THLD+EIYKQLVEKAKE+GYDVSKL +T 
Subjt:  AKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGD---HGLM-----AREGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTT

Query:  HTDPPPEGDEGPKDTKGIWWIKSILGK
         TDPPPEG++GPKDTKGIWWIKSILG+
Subjt:  HTDPPPEGDEGPKDTKGIWWIKSILGK

KAG7021212.1 Temperature-induced lipocalin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-63100Show/hide
Query:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGDHGLMAREGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPE
        MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGDHGLMAREGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPE
Subjt:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGDHGLMAREGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPE

Query:  GDEGPKDTKGIWWIKSILGK
        GDEGPKDTKGIWWIKSILGK
Subjt:  GDEGPKDTKGIWWIKSILGK

XP_004139285.1 temperature-induced lipocalin-1 [Cucumis sativus]3.9e-4154.59Show/hide
Query:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD
        M K  M+ MK VDL+RYMGRWYEIASFPSRFQP+NGANTRATYTLR                                                    GD
Subjt:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD

Query:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK
                   H L+ +     L ILCRQ HLDEEIY QLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI GK
Subjt:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK

XP_008457325.1 PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo]5.4e-4355.68Show/hide
Query:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD
        MAKK M+ MKGVDL+RYMGRWYEIASFPSRFQP+NGANTRATYTLR                                                    GD
Subjt:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD

Query:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK
                   H L+ +     L ILCRQ HLDEEIY QLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG+WWIKSI GK
Subjt:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK

XP_038890101.1 temperature-induced lipocalin-1-like [Benincasa hispida]2.3e-4154.59Show/hide
Query:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD
        M +K M+ MK VDL+RYMGRWYEIASFPSRFQP+NGANTRATYTLR                                                    GD
Subjt:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD

Query:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK
                   H L+ +     L ILCRQ HLDEEIY QLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI GK
Subjt:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK

TrEMBL top hitse value%identityAlignment
A0A0A0LL45 Apolipoprotein d1.9e-4154.59Show/hide
Query:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD
        M K  M+ MK VDL+RYMGRWYEIASFPSRFQP+NGANTRATYTLR                                                    GD
Subjt:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD

Query:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK
                   H L+ +     L ILCRQ HLDEEIY QLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI GK
Subjt:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK

A0A1S3C5X6 temperature-induced lipocalin-1-like2.6e-4355.68Show/hide
Query:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD
        MAKK M+ MKGVDL+RYMGRWYEIASFPSRFQP+NGANTRATYTLR                                                    GD
Subjt:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD

Query:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK
                   H L+ +     L ILCRQ HLDEEIY QLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG+WWIKSI GK
Subjt:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK

A0A5A7V949 Temperature-induced lipocalin-1-like2.6e-4355.68Show/hide
Query:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD
        MAKK M+ MKGVDL+RYMGRWYEIASFPSRFQP+NGANTRATYTLR                                                    GD
Subjt:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD

Query:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK
                   H L+ +     L ILCRQ HLDEEIY QLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG+WWIKSI GK
Subjt:  -----------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK

A0A6A6MCC5 Lipocln_cytosolic_FA-bd_dom domain-containing protein2.8e-4572.44Show/hide
Query:  AKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGD---HGLM-----AREGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTT
        +KK ME +KGVDL+RYMGRWYEIASFPSRFQP+NG NTRATYTL  D   H L       + G + ILCR+THLD+EIYKQLVEKAKE+GYDVSKL +T 
Subjt:  AKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGD---HGLM-----AREGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTT

Query:  HTDPPPEGDEGPKDTKGIWWIKSILGK
         TDPPPEG++GPKDTKGIWWIKSILG+
Subjt:  HTDPPPEGDEGPKDTKGIWWIKSILGK

A0A7J7HV97 Lipocln_cytosolic_FA-bd_dom domain-containing protein2.1e-4050.81Show/hide
Query:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD
        MAKK ME MKGVDL+RYMGRWYEIASFPSRFQP+NG NTRATYTLR                                                    GD
Subjt:  MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLR----------------------------------------------------GD

Query:  HGLMAREGS-------------LRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK
        + ++  +G              L ILCR+ HLDEE Y QLVEKAKE+GYDVSKL++T HT+PPPEG+EGPKDTKG+WWIKS+LGK
Subjt:  HGLMAREGS-------------LRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK

SwissProt top hitse value%identityAlignment
Q9FGT8 Temperature-induced lipocalin-12.7e-2939.34Show/hide
Query:  KKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGD------------------------------------------------------
        KK ME +KG++++RYMGRWYEIASFPSRFQP+NG +TRATYTL  D                                                      
Subjt:  KKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGD------------------------------------------------------

Query:  ---------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK
                 H L+ +     L IL R   ++EE YKQLVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+ GK
Subjt:  ---------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK

Arabidopsis top hitse value%identityAlignment
AT5G58070.1 temperature-induced lipocalin1.9e-3039.34Show/hide
Query:  KKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGD------------------------------------------------------
        KK ME +KG++++RYMGRWYEIASFPSRFQP+NG +TRATYTL  D                                                      
Subjt:  KKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGD------------------------------------------------------

Query:  ---------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK
                 H L+ +     L IL R   ++EE YKQLVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+ GK
Subjt:  ---------HGLMAR--EGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAAATTGATGGAAGCCATGAAGGGTGTCGACTTACAGAGGTACATGGGTCGATGGTACGAAATAGCTTCATTTCCTTCGAGGTTCCAGCCCAGAAATGGAGC
CAATACCAGAGCGACCTACACTCTGAGGGGCGACCATGGGTTGATGGCAAGAGAGGGTTCATTGAGGATTTTGTGCAGACAGACTCATTTGGATGAGGAGATATATAAGC
AGCTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTGCGCAGGACAACACACACAGACCCTCCACCAGAGGGAGATGAAGGCCCAAAAGATACAAAAGGA
ATATGGTGGATCAAATCAATCCTTGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGAAATTGATGGAAGCCATGAAGGGTGTCGACTTACAGAGGTACATGGGTCGATGGTACGAAATAGCTTCATTTCCTTCGAGGTTCCAGCCCAGAAATGGAGC
CAATACCAGAGCGACCTACACTCTGAGGGGCGACCATGGGTTGATGGCAAGAGAGGGTTCATTGAGGATTTTGTGCAGACAGACTCATTTGGATGAGGAGATATATAAGC
AGCTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTGCGCAGGACAACACACACAGACCCTCCACCAGAGGGAGATGAAGGCCCAAAAGATACAAAAGGA
ATATGGTGGATCAAATCAATCCTTGGAAAATGA
Protein sequenceShow/hide protein sequence
MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGDHGLMAREGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG
IWWIKSILGK