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Carg17477 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17477
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMFS domain-containing protein
Genome locationCarg_Chr12:11138383..11146641
RNA-Seq ExpressionCarg17477
SyntenyCarg17477
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU91703.1 probable anion transporter 6, chloroplastic [Tanacetum cinerariifolium]8.0e-1444.23Show/hide
Query:  ELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPGRWLAKIF
        E G++ N K +    MDW          PWKNVP  YK+IGT +LAF+ICNMDK N ++A + +    GW              GYA+ QLPG WL+KIF
Subjt:  ELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPGRWLAKIF

Query:  GGRL
        GGR+
Subjt:  GGRL

KAG6771364.1 hypothetical protein POTOM_022715 [Populus tomentosa]3.0e-1349.51Show/hide
Query:  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQLPGRWLAKIFGGR---LQYREPSVKKKDGRLLRGSLTH
        PWKN+P  YKLIGT +LAF+ICNMDK N +VA + +    GW              GYAL QLPG WLAKIFGGR   L+ R  +V    G L  GS+T 
Subjt:  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQLPGRWLAKIFGGR---LQYREPSVKKKDGRLLRGSLTH

Query:  NQA
         Q+
Subjt:  NQA

KAG7021219.1 putative anion transporter 6, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-77100Show/hide
Query:  MSRSTKRFPLFFSVSVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDKNSNVAPVWVEFFCGWIGYALCQLPG
        MSRSTKRFPLFFSVSVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDKNSNVAPVWVEFFCGWIGYALCQLPG
Subjt:  MSRSTKRFPLFFSVSVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDKNSNVAPVWVEFFCGWIGYALCQLPG

Query:  RWLAKIFGGRLQYREPSVKKKDGRLLRGSLTHNQARDDL
        RWLAKIFGGRLQYREPSVKKKDGRLLRGSLTHNQARDDL
Subjt:  RWLAKIFGGRLQYREPSVKKKDGRLLRGSLTHNQARDDL

TXG61913.1 hypothetical protein EZV62_013276 [Acer yangbiense]5.2e-1344.55Show/hide
Query:  SVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPG
        SVS + GE G +     +   E +W          PWKN+P+ YKLIGT +LAF+ICNMDK N +VA + +    GW              GYAL QLPG
Subjt:  SVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPG

Query:  RWLAKIFGGR
         WLAK+FGGR
Subjt:  RWLAKIFGGR

XP_022143032.1 probable anion transporter 6, chloroplastic isoform X2 [Momordica charantia]5.2e-1352.87Show/hide
Query:  GLIRIGR-----PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQLPGRWLAKIFGGR
        G++ +G      PWKNVP+ YKLIGT ALAF+ICNMDK N +VA + +    GW              GYAL QLPG WLAKIFGGR
Subjt:  GLIRIGR-----PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQLPGRWLAKIFGGR

TrEMBL top hitse value%identityAlignment
A0A5C7HXR4 MFS domain-containing protein2.5e-1344.55Show/hide
Query:  SVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPG
        SVS + GE G +     +   E +W          PWKN+P+ YKLIGT +LAF+ICNMDK N +VA + +    GW              GYAL QLPG
Subjt:  SVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPG

Query:  RWLAKIFGGR
         WLAK+FGGR
Subjt:  RWLAKIFGGR

A0A6J1CNZ6 probable anion transporter 6, chloroplastic isoform X12.5e-1352.87Show/hide
Query:  GLIRIGR-----PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQLPGRWLAKIFGGR
        G++ +G      PWKNVP+ YKLIGT ALAF+ICNMDK N +VA + +    GW              GYAL QLPG WLAKIFGGR
Subjt:  GLIRIGR-----PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQLPGRWLAKIFGGR

A0A6J1CPL4 probable anion transporter 6, chloroplastic isoform X22.5e-1352.87Show/hide
Query:  GLIRIGR-----PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQLPGRWLAKIFGGR
        G++ +G      PWKNVP+ YKLIGT ALAF+ICNMDK N +VA + +    GW              GYAL QLPG WLAKIFGGR
Subjt:  GLIRIGR-----PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQLPGRWLAKIFGGR

A0A6L2NZT0 Probable anion transporter 6, chloroplastic3.9e-1444.23Show/hide
Query:  ELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPGRWLAKIF
        E G++ N K +    MDW          PWKNVP  YK+IGT +LAF+ICNMDK N ++A + +    GW              GYA+ QLPG WL+KIF
Subjt:  ELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPGRWLAKIF

Query:  GGRL
        GGR+
Subjt:  GGRL

A0A7C9E4G9 MFS domain-containing protein5.0e-1442.65Show/hide
Query:  SVSVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQL
        SV+ +   G+   +R  K  +A E  W          PWKN+P  YKLIGT +LAF+ICNMDK N +VA + +    GW              GYAL QL
Subjt:  SVSVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYALCQL

Query:  PGRWLAKIFGGR---LQYREPSVKKKDGRLLRGSLT
        PG WLAKIFGGR   L+ R  +V    G L  GS+T
Subjt:  PGRWLAKIFGGR---LQYREPSVKKKDGRLLRGSLT

SwissProt top hitse value%identityAlignment
Q3E9A0 Probable anion transporter 6, chloroplastic6.3e-1452Show/hide
Query:  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPGRWLAKIFGGR
        PWKN+P  YKLIG  +LAF+ICNMDK N ++A + +    GW              GYAL QLPG WL+KIFGGR
Subjt:  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPGRWLAKIFGGR

Arabidopsis top hitse value%identityAlignment
AT5G20380.1 phosphate transporter 4;54.5e-1552Show/hide
Query:  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPGRWLAKIFGGR
        PWKN+P  YKLIG  +LAF+ICNMDK N ++A + +    GW              GYAL QLPG WL+KIFGGR
Subjt:  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYALCQLPGRWLAKIFGGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGGTCAACGAAGAGATTTCCCCTGTTCTTTTCGGTCTCCGTGTCGATGAATCGGGGCGAATTGGGTCTATTACGAAATCCGAAAACGATTCAAGCTATGGAAAT
GGATTGGATGAAGTGGGGTTTGATTCGGATTGGCCGCCCGTGGAAGAATGTTCCTGATGGATATAAATTGATTGGAACCCCGGCGCTTGCCTTCATTATTTGCAACATGG
ATAAGAATTCAAATGTCGCGCCTGTTTGGGTGGAATTCTTCTGTGGCTGGATTGGTTATGCCTTGTGCCAGTTGCCTGGTCGGTGGCTTGCCAAGATATTTGGAGGGAGG
TTACAGTACCGAGAGCCTTCAGTAAAGAAGAAGGATGGACGGTTGCTGCGGGGAAGCTTAACTCACAATCAGGCACGGGATGATCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGGTCAACGAAGAGATTTCCCCTGTTCTTTTCGGTCTCCGTGTCGATGAATCGGGGCGAATTGGGTCTATTACGAAATCCGAAAACGATTCAAGCTATGGAAAT
GGATTGGATGAAGTGGGGTTTGATTCGGATTGGCCGCCCGTGGAAGAATGTTCCTGATGGATATAAATTGATTGGAACCCCGGCGCTTGCCTTCATTATTTGCAACATGG
ATAAGAATTCAAATGTCGCGCCTGTTTGGGTGGAATTCTTCTGTGGCTGGATTGGTTATGCCTTGTGCCAGTTGCCTGGTCGGTGGCTTGCCAAGATATTTGGAGGGAGG
TTACAGTACCGAGAGCCTTCAGTAAAGAAGAAGGATGGACGGTTGCTGCGGGGAAGCTTAACTCACAATCAGGCACGGGATGATCTATAG
Protein sequenceShow/hide protein sequence
MSRSTKRFPLFFSVSVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDKNSNVAPVWVEFFCGWIGYALCQLPGRWLAKIFGGR
LQYREPSVKKKDGRLLRGSLTHNQARDDL