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Carg17484 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17484
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionActin-related protein 2/3 complex subunit 3
Genome locationCarg_Chr12:11173883..11175888
RNA-Seq ExpressionCarg17484
SyntenyCarg17484
Gene Ontology termsGO:0009247 - glycolipid biosynthetic process (biological process)
GO:0015937 - coenzyme A biosynthetic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042995 - cell projection (cellular component)
GO:0004594 - pantothenate kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046509 - 1,2-diacylglycerol 3-beta-galactosyltransferase activity (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR007204 - Actin-related protein 2/3 complex subunit 3
IPR036753 - Actin-related protein 2/3 complex subunit 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021226.1 Actin-related protein 2/3 complex subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-100100Show/hide
Query:  MERRRRFSAASEIPGGYSGSDPRIGTQTLRDLRSWGELGVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIK
        MERRRRFSAASEIPGGYSGSDPRIGTQTLRDLRSWGELGVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIK
Subjt:  MERRRRFSAASEIPGGYSGSDPRIGTQTLRDLRSWGELGVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIK

Query:  SPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGENYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        SPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGENYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  SPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGENYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

XP_008457213.1 PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis melo]1.3e-7286.06Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        ENVPVPGE                      NYL+QIREETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

XP_022938181.1 actin-related protein 2/3 complex subunit 3 isoform X1 [Cucurbita moschata]5.8e-7386.67Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        ENVPVPGE                      NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

XP_023536665.1 actin-related protein 2/3 complex subunit 3 [Cucurbita pepo subsp. pepo]5.8e-7386.67Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        ENVPVPGE                      NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

XP_038889879.1 actin-related protein 2/3 complex subunit 3 [Benincasa hispida]2.9e-7285.45Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        ENVPVPGE                      NYL+QIREETSGRLLSVAYR+NGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

TrEMBL top hitse value%identityAlignment
A0A0A0LI55 Actin-related protein 2/3 complex subunit 31.5e-7184.85Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        ENVPVPGE                      NYL+QIREETSGRLLSVAYR NGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

A0A1S3C5N9 Actin-related protein 2/3 complex subunit 36.3e-7386.06Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        ENVPVPGE                      NYL+QIREETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

A0A6J1CN65 Actin-related protein 2/3 complex subunit 31.5e-7183.64Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        VHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        E+VPVPGE                      NYL+QIREETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

A0A6J1FCE9 Actin-related protein 2/3 complex subunit 32.8e-7386.67Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        ENVPVPGE                      NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

A0A6J1HLS5 Actin-related protein 2/3 complex subunit 32.8e-7386.67Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        ENVPVPGE                      NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

SwissProt top hitse value%identityAlignment
A1DPK7 Actin-related protein 2/3 complex subunit 3-A3.2e-2641.5Show/hide
Query:  LLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGE-----------
        +LP++S  KGPAP   +D TDI+DEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+  LK+L+ C +   G K +  LG+ N P+PGE           
Subjt:  LLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGE-----------

Query:  -----------NYLRQIREETSGRLLSVAY-RANGTPNKWWLAFAKR
                    YL+Q+R+ET  RL    +      P+KWW  F KR
Subjt:  -----------NYLRQIREETSGRLLSVAY-RANGTPNKWWLAFAKR

O15145 Actin-related protein 2/3 complex subunit 31.2e-2842.17Show/hide
Query:  HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        +HSS +D +  +K  G   LLP++S  KGPAP   +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+
Subjt:  HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAY-RANGTPNKWWLAFAKR
         N P+PGE                       YL+Q+R+ET  RL    +   N  P+KWW  F KR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAY-RANGTPNKWWLAFAKR

Q1ECJ7 Actin-related protein 2/3 complex subunit 32.3e-7281.21Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        V+HSSFVDEEG++KACGCPLLPLKSHIKGPAPVS+QDKTDIVDEAITFFRANVFF NFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        E++PVPGE                      NYL+Q+REETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

Q3T035 Actin-related protein 2/3 complex subunit 31.2e-2842.17Show/hide
Query:  HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        +HSS +D +  +K  G   LLP++S  KGPAP   +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+
Subjt:  HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAY-RANGTPNKWWLAFAKR
         N P+PGE                       YL+Q+R+ET  RL    +   N  P+KWW  F KR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAY-RANGTPNKWWLAFAKR

Q9JM76 Actin-related protein 2/3 complex subunit 32.7e-2842.17Show/hide
Query:  HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        +HSS +D +  +K  G   LLPL+S  KGPAP   +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+
Subjt:  HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAY-RANGTPNKWWLAFAKR
         N P+PGE                       YL+Q+R+ET  RL    +   +  P+KWW  F KR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAY-RANGTPNKWWLAFAKR

Arabidopsis top hitse value%identityAlignment
AT1G60430.1 actin-related protein C31.6e-7381.21Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        V+HSSFVDEEG++KACGCPLLPLKSHIKGPAPVS+QDKTDIVDEAITFFRANVFF NFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        E++PVPGE                      NYL+Q+REETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR

AT1G60430.2 actin-related protein C31.6e-7381.21Show/hide
Query:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
        V+HSSFVDEEG++KACGCPLLPLKSHIKGPAPVS+QDKTDIVDEAITFFRANVFF NFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL
Subjt:  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGL

Query:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR
        E++PVPGE                      NYL+Q+REETSGRLLSVAYRANGTPNKWWLAFAKR
Subjt:  ENVPVPGE----------------------NYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAAGAAGACGGTTCAGCGCTGCCTCTGAAATTCCCGGCGGCTATTCCGGCTCTGATCCGCGCATTGGAACACAAACTCTCCGCGATCTTCGCAGTTGGGGAGA
ACTCGGAGTTCACCACTCTAGCTTTGTAGATGAGGAAGGAATAAGCAAGGCTTGTGGATGCCCCTTACTTCCTTTGAAAAGTCATATAAAGGGTCCTGCTCCAGTTTCAG
ATCAAGATAAGACTGATATTGTTGATGAAGCAATTACATTCTTTCGTGCCAATGTTTTCTTTAGAAATTTTGACATCAAGAGTCCTGCTGATAAGCTTCTCATCTATTTG
ACATTCTACATCAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACTAAGGCAATAATTAACTTGGGCTTGGAGAATGTTCCCGTGCCTGGAGA
GAATTATTTGAGGCAAATAAGAGAAGAAACAAGTGGGAGACTCTTGAGTGTTGCGTATAGAGCCAATGGAACTCCAAATAAATGGTGGCTAGCATTTGCAAAGAGG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAAGAAGACGGTTCAGCGCTGCCTCTGAAATTCCCGGCGGCTATTCCGGCTCTGATCCGCGCATTGGAACACAAACTCTCCGCGATCTTCGCAGTTGGGGAGA
ACTCGGAGTTCACCACTCTAGCTTTGTAGATGAGGAAGGAATAAGCAAGGCTTGTGGATGCCCCTTACTTCCTTTGAAAAGTCATATAAAGGGTCCTGCTCCAGTTTCAG
ATCAAGATAAGACTGATATTGTTGATGAAGCAATTACATTCTTTCGTGCCAATGTTTTCTTTAGAAATTTTGACATCAAGAGTCCTGCTGATAAGCTTCTCATCTATTTG
ACATTCTACATCAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACTAAGGCAATAATTAACTTGGGCTTGGAGAATGTTCCCGTGCCTGGAGA
GAATTATTTGAGGCAAATAAGAGAAGAAACAAGTGGGAGACTCTTGAGTGTTGCGTATAGAGCCAATGGAACTCCAAATAAATGGTGGCTAGCATTTGCAAAGAGG
Protein sequenceShow/hide protein sequence
MERRRRFSAASEIPGGYSGSDPRIGTQTLRDLRSWGELGVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYL
TFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGENYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR