; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17495 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17495
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmethyl-CpG-binding domain-containing protein 11-like
Genome locationCarg_Chr12:11275825..11280185
RNA-Seq ExpressionCarg17495
SyntenyCarg17495
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001739 - Methyl-CpG DNA binding
IPR016177 - DNA-binding domain superfamily
IPR039622 - Methyl-CpG-binding domain-containing protein 10/11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586387.1 Methyl-CpG-binding domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia]5.2e-6087.25Show/hide
Query:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK
        FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK
Subjt:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK

Query:  KEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK
        KEIDNQDGEKHESMVDA VKDEKV K         KQ+ KI S + ++K
Subjt:  KEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK

KAG7021237.1 Methyl-CpG-binding domain-containing protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-117100Show/hide
Query:  MEDQRSLKFFYKQPCEGEFPKRIGKPELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPP
        MEDQRSLKFFYKQPCEGEFPKRIGKPELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPP
Subjt:  MEDQRSLKFFYKQPCEGEFPKRIGKPELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPP

Query:  VEREHPKRRRSSVSKKDIKETEAEPEVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDKGGLRKRGQKDGEVVEKLNTE
        VEREHPKRRRSSVSKKDIKETEAEPEVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDKGGLRKRGQKDGEVVEKLNTE
Subjt:  VEREHPKRRRSSVSKKDIKETEAEPEVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDKGGLRKRGQKDGEVVEKLNTE

Query:  KRKPPPRGAGASASYAVLS
        KRKPPPRGAGASASYAVLS
Subjt:  KRKPPPRGAGASASYAVLS

XP_022937827.1 methyl-CpG-binding domain-containing protein 11-like isoform X1 [Cucurbita moschata]5.2e-6083.87Show/hide
Query:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP
        P  + +FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP
Subjt:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP

Query:  EVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK
        EVLEEKKEID+QDGEKHE MVDAAVKDEKV K         KQ+ KI S + ++K
Subjt:  EVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK

XP_022937828.1 methyl-CpG-binding domain-containing protein 10-like isoform X2 [Cucurbita moschata]2.6e-5986.58Show/hide
Query:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK
        FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK
Subjt:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK

Query:  KEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK
        KEID+QDGEKHE MVDAAVKDEKV K         KQ+ KI S + ++K
Subjt:  KEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK

XP_023537783.1 methyl-CpG-binding domain-containing protein 10-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-5983.23Show/hide
Query:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP
        P  + +FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPG PAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP
Subjt:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP

Query:  EVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK
        EVLEE+KEIDNQDGEKHESMVDA VKDEKV K         KQ+ KI S + ++K
Subjt:  EVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK

TrEMBL top hitse value%identityAlignment
A0A5D3BH67 Methyl-CpG-binding domain-containing protein 11-like9.9e-4980.31Show/hide
Query:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP
        P  + +FFPKQG SPRKHEVIF TPTGEEIN+KRKLDQYLKAHPG PAAAEFDW TGETPRRSARISEK+K +PP+E EHPKR+R+SVSKKD+KETEAEP
Subjt:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP

Query:  EVLEEKKEIDNQDGEKHESMVDAAVKD
        EVLEEKKE+DN D  K ESM DA VKD
Subjt:  EVLEEKKEIDNQDGEKHESMVDAAVKD

A0A6J1FCB1 methyl-CpG-binding domain-containing protein 11-like isoform X12.5e-6083.87Show/hide
Query:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP
        P  + +FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP
Subjt:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP

Query:  EVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK
        EVLEEKKEID+QDGEKHE MVDAAVKDEKV K         KQ+ KI S + ++K
Subjt:  EVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK

A0A6J1FCB6 methyl-CpG-binding domain-containing protein 10-like isoform X21.2e-5986.58Show/hide
Query:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK
        FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK
Subjt:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK

Query:  KEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK
        KEID+QDGEKHE MVDAAVKDEKV K         KQ+ KI S + ++K
Subjt:  KEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDK

A0A6J1HLG2 methyl-CpG-binding domain-containing protein 11-like isoform X11.4e-5870.74Show/hide
Query:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP
        P  + +FFPKQGKSPRKHEVIFITPTGEEINHKR+LDQYLKAHPG PAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP
Subjt:  PELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEP

Query:  EVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGG-------KQQQKIWSGTARDK--GGLRKRGQKDGEVVEKLNTEKRKP
        EVLEE+KEIDNQDGEKHESMVDA VKDEKV K    +           KQ+ KI S + ++K    L ++  +  ++    N E  KP
Subjt:  EVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGG-------KQQQKIWSGTARDK--GGLRKRGQKDGEVVEKLNTEKRKP

A0A6J1HMU6 methyl-CpG-binding domain-containing protein 10-like isoform X26.8e-5872.53Show/hide
Query:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK
        FFPKQGKSPRKHEVIFITPTGEEINHKR+LDQYLKAHPG PAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEE+
Subjt:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRRSSVSKKDIKETEAEPEVLEEK

Query:  KEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGG-------KQQQKIWSGTARDK--GGLRKRGQKDGEVVEKLNTEKRKP
        KEIDNQDGEKHESMVDA VKDEKV K    +           KQ+ KI S + ++K    L ++  +  ++    N E  KP
Subjt:  KEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGG-------KQQQKIWSGTARDK--GGLRKRGQKDGEVVEKLNTEKRKP

SwissProt top hitse value%identityAlignment
Q9LW00 Methyl-CpG-binding domain-containing protein 115.8e-2244.83Show/hide
Query:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRR---RSSVSKKD-----------
        F+P +  S +K EV+F+ PTGEEI+++++L+QYLK+HPG+PA AEFDW+T  TPRRSARISEK+K TP  ++E PK+R   +S VSKKD           
Subjt:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRR---RSSVSKKD-----------

Query:  ----IKETEAE-PEVLEEKKEIDNQDGEKHESMVDAAVKDEKVAK
            +K+TE   PE + E + + +++G      V+ A K+  VA+
Subjt:  ----IKETEAE-PEVLEEKKEIDNQDGEKHESMVDAAVKDEKVAK

Q9XI36 Methyl-CpG-binding domain-containing protein 101.4e-2339.46Show/hide
Query:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHP--KRRRSSVSKKDIKETEAEPEVLE
        F+PK+  +PRK E++F+ PTGEEI+ +++L+QYLKAHPG+P  +EF+W+TGETPRRS+RIS+K K T P   + P  K+RRSS++KKD KE   + E   
Subjt:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHP--KRRRSSVSKKDIKETEAEPEVLE

Query:  EKKEID-NQDGEKHESMVDAAVKDE---KVAKCHRGKPHGGK-QQQKIWSGTARDKGGLRKRGQ---------KDGEVVEKLNTE
         K+ +D ++DG+   +  +   + E   ++A+  +    G K + +K+     + + G  K GQ         K+GE  E  N E
Subjt:  EKKEID-NQDGEKHESMVDAAVKDE---KVAKCHRGKPHGGK-QQQKIWSGTARDKGGLRKRGQ---------KDGEVVEKLNTE

Arabidopsis top hitse value%identityAlignment
AT1G15340.1 methyl-CPG-binding domain 109.9e-2539.46Show/hide
Query:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHP--KRRRSSVSKKDIKETEAEPEVLE
        F+PK+  +PRK E++F+ PTGEEI+ +++L+QYLKAHPG+P  +EF+W+TGETPRRS+RIS+K K T P   + P  K+RRSS++KKD KE   + E   
Subjt:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHP--KRRRSSVSKKDIKETEAEPEVLE

Query:  EKKEID-NQDGEKHESMVDAAVKDE---KVAKCHRGKPHGGK-QQQKIWSGTARDKGGLRKRGQ---------KDGEVVEKLNTE
         K+ +D ++DG+   +  +   + E   ++A+  +    G K + +K+     + + G  K GQ         K+GE  E  N E
Subjt:  EKKEID-NQDGEKHESMVDAAVKDE---KVAKCHRGKPHGGK-QQQKIWSGTARDKGGLRKRGQ---------KDGEVVEKLNTE

AT1G15340.2 methyl-CPG-binding domain 101.7e-0530.85Show/hide
Query:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLK-----AHPGSPAAAEFDWST---GETPRRSA-RISEKSKVTPPVE-----REHPKRRRSSVSKKD
        F+PK+  +PRK E++F+ PTGEEI+ +++L+QYLK     A     AA + +      G+T    A +  EK  VT   E      E  K     V+K+ 
Subjt:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLK-----AHPGSPAAAEFDWST---GETPRRSA-RISEKSKVTPPVE-----REHPKRRRSSVSKKD

Query:  IKE----------TEAEPEVLEEKKEIDNQDGE----KHESM-VDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDKGGLRKRGQKDG-EVVEKLNTEK
         K            EAE E   EK E +N++ E    K ESM VD +  ++K      G   G ++  K+         GL+    K+  EVV + + EK
Subjt:  IKE----------TEAEPEVLEEKKEIDNQDGE----KHESM-VDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDKGGLRKRGQKDG-EVVEKLNTEK

Query:  R
        +
Subjt:  R

AT3G15790.1 methyl-CPG-binding domain 114.1e-2344.83Show/hide
Query:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRR---RSSVSKKD-----------
        F+P +  S +K EV+F+ PTGEEI+++++L+QYLK+HPG+PA AEFDW+T  TPRRSARISEK+K TP  ++E PK+R   +S VSKKD           
Subjt:  FFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRR---RSSVSKKD-----------

Query:  ----IKETEAE-PEVLEEKKEIDNQDGEKHESMVDAAVKDEKVAK
            +K+TE   PE + E + + +++G      V+ A K+  VA+
Subjt:  ----IKETEAE-PEVLEEKKEIDNQDGEKHESMVDAAVKDEKVAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATCAACGCAGCTTGAAGTTCTTCTACAAACAACCGTGTGAAGGCGAATTTCCGAAGAGGATCGGGAAGCCTGAGCTGAGAAGTGAGTTTTTTCCCAAGCAAGG
TAAATCCCCTAGGAAACATGAGGTCATCTTCATAACTCCTACAGGGGAGGAGATCAACCACAAAAGGAAGTTGGATCAGTACCTGAAGGCACACCCCGGTAGCCCGGCAG
CTGCTGAATTTGATTGGAGCACGGGTGAGACGCCAAGGAGGTCAGCAAGGATAAGCGAAAAGAGTAAAGTGACTCCACCGGTCGAACGTGAGCATCCCAAGAGAAGAAGA
TCTTCTGTGTCGAAGAAAGATATTAAAGAAACAGAAGCTGAACCAGAAGTTTTGGAGGAGAAGAAAGAAATTGACAACCAAGACGGTGAAAAACATGAGAGCATGGTTGA
TGCTGCGGTAAAAGATGAAAAGGTTGCAAAATGTCATAGAGGAAAGCCCCATGGAGGAAAACAGCAACAAAAGATATGGTCGGGAACGGCTAGGGACAAGGGAGGGCTGC
GGAAGCGTGGCCAGAAGGACGGGGAAGTAGTAGAAAAACTTAACACCGAGAAAAGAAAACCGCCTCCCCGGGGGGCGGGCGCATCCGCATCGTATGCCGTTCTATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATCAACGCAGCTTGAAGTTCTTCTACAAACAACCGTGTGAAGGCGAATTTCCGAAGAGGATCGGGAAGCCTGAGCTGAGAAGTGAGTTTTTTCCCAAGCAAGG
TAAATCCCCTAGGAAACATGAGGTCATCTTCATAACTCCTACAGGGGAGGAGATCAACCACAAAAGGAAGTTGGATCAGTACCTGAAGGCACACCCCGGTAGCCCGGCAG
CTGCTGAATTTGATTGGAGCACGGGTGAGACGCCAAGGAGGTCAGCAAGGATAAGCGAAAAGAGTAAAGTGACTCCACCGGTCGAACGTGAGCATCCCAAGAGAAGAAGA
TCTTCTGTGTCGAAGAAAGATATTAAAGAAACAGAAGCTGAACCAGAAGTTTTGGAGGAGAAGAAAGAAATTGACAACCAAGACGGTGAAAAACATGAGAGCATGGTTGA
TGCTGCGGTAAAAGATGAAAAGGTTGCAAAATGTCATAGAGGAAAGCCCCATGGAGGAAAACAGCAACAAAAGATATGGTCGGGAACGGCTAGGGACAAGGGAGGGCTGC
GGAAGCGTGGCCAGAAGGACGGGGAAGTAGTAGAAAAACTTAACACCGAGAAAAGAAAACCGCCTCCCCGGGGGGCGGGCGCATCCGCATCGTATGCCGTTCTATCTTAA
Protein sequenceShow/hide protein sequence
MEDQRSLKFFYKQPCEGEFPKRIGKPELRSEFFPKQGKSPRKHEVIFITPTGEEINHKRKLDQYLKAHPGSPAAAEFDWSTGETPRRSARISEKSKVTPPVEREHPKRRR
SSVSKKDIKETEAEPEVLEEKKEIDNQDGEKHESMVDAAVKDEKVAKCHRGKPHGGKQQQKIWSGTARDKGGLRKRGQKDGEVVEKLNTEKRKPPPRGAGASASYAVLS