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Carg17496 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17496
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmethyl-CpG-binding domain-containing protein 11-like isoform X1
Genome locationCarg_Chr12:11281187..11283701
RNA-Seq ExpressionCarg17496
SyntenyCarg17496
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021001.1 hypothetical protein SDJN02_17689, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-1553Show/hide
Query:  QTPGDVPARRVSFEGGGHEAVDTRRCAAKDAGD-------LTSIGERNECQARHRVPVRRLKPEGGWTLGSVPTMTLGPEGGWIGGPTSIGEGNKCQRGR
        ++ GDVP RR+S EG     VDTRRCA+KDAG         TSIGE N+ +A         +P+ GW  G V T  L PEGG +GGPTSIGEGN+CQRGR
Subjt:  QTPGDVPARRVSFEGGGHEAVDTRRCAAKDAGD-------LTSIGERNECQARHRVPVRRLKPEGGWTLGSVPTMTLGPEGGWIGGPTSIGEGNKCQRGR
KAG7021238.1 hypothetical protein SDJN02_17926, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-65100Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKKNQTPGDVPARRVSFEGGGHEAVDTRRCAAKDAGDLTSIGERNECQARHRVPVRRLKPEGGWTLGSVPTMTLG
        MAESVEKDTSNEEVLSFELPAPPGWKKKNQTPGDVPARRVSFEGGGHEAVDTRRCAAKDAGDLTSIGERNECQARHRVPVRRLKPEGGWTLGSVPTMTLG
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKKNQTPGDVPARRVSFEGGGHEAVDTRRCAAKDAGDLTSIGERNECQARHRVPVRRLKPEGGWTLGSVPTMTLG

Query:  PEGGWIGGPTSIGEGNKCQRGR
        PEGGWIGGPTSIGEGNKCQRGR
Subjt:  PEGGWIGGPTSIGEGNKCQRGR
XP_022937827.1 methyl-CpG-binding domain-containing protein 11-like isoform X1 [Cucurbita moschata]1.2e-05100Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDTSNEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
XP_022965862.1 methyl-CpG-binding domain-containing protein 11-like isoform X1 [Cucurbita maxima]2.7e-0596.43Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDT+NEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
XP_023537783.1 methyl-CpG-binding domain-containing protein 10-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-05100Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDTSNEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
TrEMBL top hitse value%identityAlignment
A0A6J1CQ83 methyl-CpG-binding domain-containing protein 11-like9.2e-0482.14Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MA SV+KD++NEEV+SFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
A0A6J1FCB1 methyl-CpG-binding domain-containing protein 11-like isoform X15.8e-06100Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDTSNEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
A0A6J1HLG2 methyl-CpG-binding domain-containing protein 11-like isoform X11.3e-0596.43Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDT+NEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCAGTGGAGAAAGACACTTCGAATGAGGAGGTTCTGTCCTTCGAACTCCCTGCCCCTCCTGGCTGGAAGAAAAAGAACCAAACACCAGGCGATGTGCCAGC
TAGGAGAGTAAGTTTCGAAGGGGGTGGACACGAGGCGGTGGACACGAGGCGGTGTGCCGCCAAGGACGCTGGGGATCTCACATCGATTGGAGAACGGAACGAGTGTCAAG
CCAGACACCGTGTGCCAGTGAGGAGGCTTAAACCCGAAGGGGGGTGGACACTAGGCAGTGTGCCAACGATGACGCTGGGCCCCGAAGGGGGGTGGATTGGGGGTCCTACA
TCGATCGGAGAGGGGAACAAGTGCCAGCGAGGACGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAATCAGTGGAGAAAGACACTTCGAATGAGGAGGTTCTGTCCTTCGAACTCCCTGCCCCTCCTGGCTGGAAGAAAAAGAACCAAACACCAGGCGATGTGCCAGC
TAGGAGAGTAAGTTTCGAAGGGGGTGGACACGAGGCGGTGGACACGAGGCGGTGTGCCGCCAAGGACGCTGGGGATCTCACATCGATTGGAGAACGGAACGAGTGTCAAG
CCAGACACCGTGTGCCAGTGAGGAGGCTTAAACCCGAAGGGGGGTGGACACTAGGCAGTGTGCCAACGATGACGCTGGGCCCCGAAGGGGGGTGGATTGGGGGTCCTACA
TCGATCGGAGAGGGGAACAAGTGCCAGCGAGGACGCTAG
Protein sequenceShow/hide protein sequence
MAESVEKDTSNEEVLSFELPAPPGWKKKNQTPGDVPARRVSFEGGGHEAVDTRRCAAKDAGDLTSIGERNECQARHRVPVRRLKPEGGWTLGSVPTMTLGPEGGWIGGPT
SIGEGNKCQRGR