; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17502 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17502
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHeat shock protein DnaJ, cysteine-rich domain-containing protein
Genome locationCarg_Chr12:11315971..11320128
RNA-Seq ExpressionCarg17502
SyntenyCarg17502
Gene Ontology termsGO:0061077 - chaperone-mediated protein folding (biological process)
GO:0110102 - chloroplast ribulose bisphosphate carboxylase complex assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0101031 - chaperone complex (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
GO:1905538 - polysome binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586393.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1197.06Show/hide
Query:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
KAG7021244.1 hypothetical protein SDJN02_17932, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-62100Show/hide
Query:  MFLDQLEVPRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRINDTEGTVMNIAEAKGTSCVVAVMEQLKFQLLWICFDNMAFS
        MFLDQLEVPRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRINDTEGTVMNIAEAKGTSCVVAVMEQLKFQLLWICFDNMAFS
Subjt:  MFLDQLEVPRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRINDTEGTVMNIAEAKGTSCVVAVMEQLKFQLLWICFDNMAFS

Query:  RINCFIGSLWIRFDNMTL
        RINCFIGSLWIRFDNMTL
Subjt:  RINCFIGSLWIRFDNMTL
XP_022938233.1 uncharacterized protein LOC111444376 [Cucurbita moschata]1.1e-1197.06Show/hide
Query:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
XP_022965999.1 uncharacterized protein LOC111465718 [Cucurbita maxima]1.1e-1197.06Show/hide
Query:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
XP_023537582.1 uncharacterized protein LOC111798573 [Cucurbita pepo subsp. pepo]1.1e-1197.06Show/hide
Query:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
TrEMBL top hitse value%identityAlignment
A0A1U8DYJ8 uncharacterized protein LOC1078407317.5e-1182.05Show/hide
Query:  FFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        F P  +GAV CAQC+GTGVNS DHFNGRFKAGGLCWLCR
Subjt:  FFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
A0A6A5NU30 Uncharacterized protein1.2e-1174.42Show/hide
Query:  SLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        SL   F Q  GA+ C QC+GTG+NSEDHFNGRFKAGGLCWLCR
Subjt:  SLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
A0A6J1CMI1 uncharacterized protein LOC1110129891.3e-1088.24Show/hide
Query:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        +GAV C+QC+GTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
A0A6J1FIB2 uncharacterized protein LOC1114443765.2e-1297.06Show/hide
Query:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
A0A6J1HSG2 uncharacterized protein LOC1114657185.2e-1297.06Show/hide
Query:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        +GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
SwissProt top hitse value%identityAlignment
Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic2.3e-0954Show/hide
Query:  PRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        P+     SL+    +  G V C+QC+G GVN  DHFNG+FKAG LCWLCR
Subjt:  PRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic6.8e-0967.65Show/hide
Query:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        +GA+ C +C+G GVNS D+F GRFKAG LCWLCR
Subjt:  SGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Arabidopsis top hitse value%identityAlignment
AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein1.7e-1054Show/hide
Query:  PRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
        P+     SL+    +  G V C+QC+G GVN  DHFNG+FKAG LCWLCR
Subjt:  PRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGATCAGCTCGAGGTTCCTCGTTCCGTGGATAGTTTGAGTTTACTGATTTTTTTCCCTCAATTTTCAGGTGCTGTCCAATGTGCTCAGTGTCAAGGAACAGG
AGTGAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAATTAACGATACTGAGGGTACCGTGATGAACATTGCAGAGGCAAAAG
GGACATCCTGTGTGGTGGCTGTAATGGAGCAGCTCAAGTTTCAACTGTTATGGATTTGTTTCGATAACATGGCCTTCTCGAGGATCAACTGTTTCATTGGATCATTATGG
ATTCGTTTCGATAACATGACCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGATCAGCTCGAGGTTCCTCGTTCCGTGGATAGTTTGAGTTTACTGATTTTTTTCCCTCAATTTTCAGGTGCTGTCCAATGTGCTCAGTGTCAAGGAACAGG
AGTGAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAATTAACGATACTGAGGGTACCGTGATGAACATTGCAGAGGCAAAAG
GGACATCCTGTGTGGTGGCTGTAATGGAGCAGCTCAAGTTTCAACTGTTATGGATTTGTTTCGATAACATGGCCTTCTCGAGGATCAACTGTTTCATTGGATCATTATGG
ATTCGTTTCGATAACATGACCTTGTGAGTATTATGAATTTAAAGTTCCCTTCTACTTAATGGAATTCGTCCCTTT
Protein sequenceShow/hide protein sequence
MFLDQLEVPRSVDSLSLLIFFPQFSGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRINDTEGTVMNIAEAKGTSCVVAVMEQLKFQLLWICFDNMAFSRINCFIGSLW
IRFDNMTL