; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17506 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17506
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:11326040..11328383
RNA-Seq ExpressionCarg17506
SyntenyCarg17506
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021248.1 hypothetical protein SDJN02_17936, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-151100Show/hide
Query:  MKNGSFRRQSIIRRYDAKMTRIFLILSADSLFSGHGLQMNLVSSSLGAVCICTMLNASMANFAPVADTALLSSRPTNWVNSITNSLQIFKNRLKRQNTKP
        MKNGSFRRQSIIRRYDAKMTRIFLILSADSLFSGHGLQMNLVSSSLGAVCICTMLNASMANFAPVADTALLSSRPTNWVNSITNSLQIFKNRLKRQNTKP
Subjt:  MKNGSFRRQSIIRRYDAKMTRIFLILSADSLFSGHGLQMNLVSSSLGAVCICTMLNASMANFAPVADTALLSSRPTNWVNSITNSLQIFKNRLKRQNTKP

Query:  HRSSGETSHSNIGTHINNKSISGIAALHLLQNLLNRDRNVRLPKGLSLKHPDDVLVGLIGQVPQIRDRKQKRVSNAFHDVGNYRGAIIVGNEKWGLMVKV
        HRSSGETSHSNIGTHINNKSISGIAALHLLQNLLNRDRNVRLPKGLSLKHPDDVLVGLIGQVPQIRDRKQKRVSNAFHDVGNYRGAIIVGNEKWGLMVKV
Subjt:  HRSSGETSHSNIGTHINNKSISGIAALHLLQNLLNRDRNVRLPKGLSLKHPDDVLVGLIGQVPQIRDRKQKRVSNAFHDVGNYRGAIIVGNEKWGLMVKV

Query:  GADRSIGLEFPKRKKKRMRMEKEKRKKRKMGERNLGDLSLFQAFAMETSTRDQTKKIVSNSGERVNCRKHEESKVLYINFSLN
        GADRSIGLEFPKRKKKRMRMEKEKRKKRKMGERNLGDLSLFQAFAMETSTRDQTKKIVSNSGERVNCRKHEESKVLYINFSLN
Subjt:  GADRSIGLEFPKRKKKRMRMEKEKRKKRKMGERNLGDLSLFQAFAMETSTRDQTKKIVSNSGERVNCRKHEESKVLYINFSLN
TrEMBL top hitse value%identityAlignment
A0A6N2MGI5 Uncharacterized protein3.5e-0639.42Show/hide
Query:  VADTALLSS---RPTNWVNSITNSLQIFKNRLKRQNTKPHRSSGETSHSNIGTHINNKSISGIAALHLLQNLLNRDRNVRLPKGLSLKHPDDVLVGLIGQ
        V D++L +S   R T   N ITN L++  + L+ Q+ K H    ET HS++  +I+++ IS   + H  + LL+R RN+ LP+ LS + P +VLVGL+ Q
Subjt:  VADTALLSS---RPTNWVNSITNSLQIFKNRLKRQNTKPHRSSGETSHSNIGTHINNKSISGIAALHLLQNLLNRDRNVRLPKGLSLKHPDDVLVGLIGQ

Query:  VPQI
         P+I
Subjt:  VPQI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACGGCTCATTTCGAAGGCAGTCGATCATTAGACGATACGACGCCAAGATGACTCGAATTTTCTTGATTTTAAGTGCAGATTCTTTGTTCTCTGGACATGGTTT
GCAAATGAATTTGGTTTCAAGCAGTCTTGGTGCAGTGTGCATCTGTACCATGCTGAATGCAAGTATGGCTAACTTTGCACCAGTTGCTGATACAGCACTGTTGTCAAGCC
GTCCAACTAACTGGGTAAATTCCATCACAAATTCTCTGCAAATTTTCAAAAACAGGCTCAAACGCCAAAACACGAAACCCCATCGCAGCAGCGGCGAAACTAGCCATTCC
AACATTGGCACCCACATCAACAACAAATCCATCTCTGGAATCGCCGCCCTTCATCTTCTCCAAAACCTCTTGAATCGTGACAGAAATGTCAGGCTTCCGAAAGGGCTTTC
CCTTAAGCATCCTGACGATGTTCTTGTGGGGCTTATCGGGCAAGTTCCCCAAATCCGCGATCGAAAACAGAAACGGGTATCGAACGCCTTCCACGACGTTGGCAATTACC
GGGGGGCGATTATCGTTGGAAATGAAAAATGGGGTTTGATGGTGAAAGTAGGGGCGGATCGCTCCATAGGGCTTGAGTTTCCGAAGAGGAAGAAGAAGAGGATGAGGATG
GAGAAGGAAAAGAGGAAGAAGAGGAAAATGGGGGAGAGGAATCTCGGGGACTTGTCTCTTTTCCAGGCATTCGCCATGGAAACGTCGACGCGAGATCAAACGAAGAAGAT
TGTCTCGAATTCAGGCGAGAGAGTGAACTGTCGGAAGCACGAAGAGAGTAAGGTCTTATATATTAATTTTAGCTTAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACGGCTCATTTCGAAGGCAGTCGATCATTAGACGATACGACGCCAAGATGACTCGAATTTTCTTGATTTTAAGTGCAGATTCTTTGTTCTCTGGACATGGTTT
GCAAATGAATTTGGTTTCAAGCAGTCTTGGTGCAGTGTGCATCTGTACCATGCTGAATGCAAGTATGGCTAACTTTGCACCAGTTGCTGATACAGCACTGTTGTCAAGCC
GTCCAACTAACTGGGTAAATTCCATCACAAATTCTCTGCAAATTTTCAAAAACAGGCTCAAACGCCAAAACACGAAACCCCATCGCAGCAGCGGCGAAACTAGCCATTCC
AACATTGGCACCCACATCAACAACAAATCCATCTCTGGAATCGCCGCCCTTCATCTTCTCCAAAACCTCTTGAATCGTGACAGAAATGTCAGGCTTCCGAAAGGGCTTTC
CCTTAAGCATCCTGACGATGTTCTTGTGGGGCTTATCGGGCAAGTTCCCCAAATCCGCGATCGAAAACAGAAACGGGTATCGAACGCCTTCCACGACGTTGGCAATTACC
GGGGGGCGATTATCGTTGGAAATGAAAAATGGGGTTTGATGGTGAAAGTAGGGGCGGATCGCTCCATAGGGCTTGAGTTTCCGAAGAGGAAGAAGAAGAGGATGAGGATG
GAGAAGGAAAAGAGGAAGAAGAGGAAAATGGGGGAGAGGAATCTCGGGGACTTGTCTCTTTTCCAGGCATTCGCCATGGAAACGTCGACGCGAGATCAAACGAAGAAGAT
TGTCTCGAATTCAGGCGAGAGAGTGAACTGTCGGAAGCACGAAGAGAGTAAGGTCTTATATATTAATTTTAGCTTAAATTAA
Protein sequenceShow/hide protein sequence
MKNGSFRRQSIIRRYDAKMTRIFLILSADSLFSGHGLQMNLVSSSLGAVCICTMLNASMANFAPVADTALLSSRPTNWVNSITNSLQIFKNRLKRQNTKPHRSSGETSHS
NIGTHINNKSISGIAALHLLQNLLNRDRNVRLPKGLSLKHPDDVLVGLIGQVPQIRDRKQKRVSNAFHDVGNYRGAIIVGNEKWGLMVKVGADRSIGLEFPKRKKKRMRM
EKEKRKKRKMGERNLGDLSLFQAFAMETSTRDQTKKIVSNSGERVNCRKHEESKVLYINFSLN