; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17518 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17518
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger CCCH domain-containing protein 39-like
Genome locationCarg_Chr12:11394259..11395578
RNA-Seq ExpressionCarg17518
SyntenyCarg17518
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586406.1 Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. sororia]5.7e-196100Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
        MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH

Query:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
        GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
Subjt:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS

Query:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
        RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
Subjt:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK

Query:  WKGPKKINRIYADWLDDLPLSPTSASKLE
        WKGPKKINRIYADWLDDLPLSPTSASKLE
Subjt:  WKGPKKINRIYADWLDDLPLSPTSASKLE

KAG7021260.1 Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-196100Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
        MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH

Query:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
        GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
Subjt:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS

Query:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
        RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
Subjt:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK

Query:  WKGPKKINRIYADWLDDLPLSPTSASKLE
        WKGPKKINRIYADWLDDLPLSPTSASKLE
Subjt:  WKGPKKINRIYADWLDDLPLSPTSASKLE

XP_022937467.1 zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata]7.3e-19198.48Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
        MSFNDIRGSVIPPPLHPYGA+ DATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH

Query:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
        GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
Subjt:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS

Query:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
        RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATS LPEGQAKPCLLK
Subjt:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK

Query:  WKGPKKINRIYADWLDDLPLSPTSASKLE
        WKGPKKINRIYADWLDDLPLSPTSASKLE
Subjt:  WKGPKKINRIYADWLDDLPLSPTSASKLE

XP_022965837.1 zinc finger CCCH domain-containing protein 39-like [Cucurbita maxima]2.0e-18896.66Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
        M+FNDIRGSVIPPPLHPYGANGDATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEEN SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH

Query:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
        GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
Subjt:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS

Query:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
        RAVSC   ASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREG+VSNPALNINP+VVAMEASPSLAASVATS LPEGQAKPCLLK
Subjt:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK

Query:  WKGPKKINRIYADWLDDLPLSPTSASKLE
        WKGPKKINRIYADWLDDLPLSPTSASKL+
Subjt:  WKGPKKINRIYADWLDDLPLSPTSASKLE

XP_023536864.1 zinc finger CCCH domain-containing protein 39-like [Cucurbita pepo subsp. pepo]2.2e-18796.05Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
        MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEEN SRVQNGP+NKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH

Query:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
        GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPL NGNDSSYSEPS
Subjt:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS

Query:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
        RAVSC  SASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHG+SELQLSLGREGEVSNPALNINP+VVAMEASP+LAASVATS LPEGQAKPCLLK
Subjt:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK

Query:  WKGPKKINRIYADWLDDLPLSPTSASKLE
        WKGPKKINRIYADWL+DLPLSPTSA+KLE
Subjt:  WKGPKKINRIYADWLDDLPLSPTSASKLE

TrEMBL top hitse value%identityAlignment
A0A1S3C7N3 zinc finger CCCH domain-containing protein 39-like2.0e-16281.32Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLS--------------RVQNGPVNKGINNIFFKTRMCAKFK
        MSFND+RGSVIPPPLH YG+NGDA+GCWSQ+PRNDPFD QSQFE QQPP+KRARNSEEN S                 N PVNKGI+NIFFKTRMCAKFK
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLS--------------RVQNGPVNKGINNIFFKTRMCAKFK

Query:  LGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVT
        LGLCRNGA+CNFAHG EDMRQPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTT T
Subjt:  LGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVT

Query:  PLMNGND-SSYSEPSRAVSCSASASDSLRGNGN---AFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAA
        PLMNG+D SSY EPSRA SC  S SD+LR NGN   +FWKTKLCTKWE+TGHCPFGDKCHFAHGQSELQL +GREGEVS  ALN+ P++VAMEAS SL  
Subjt:  PLMNGND-SSYSEPSRAVSCSASASDSLRGNGN---AFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAA

Query:  SVATSS-LPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE
        SV  SS LPEGQAKP LLKWKGPKKINRIYADWLDDLPLSP+S SK+E
Subjt:  SVATSS-LPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE

A0A5A7V7E5 Zinc finger CCCH domain-containing protein 39-like2.0e-16281.32Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLS--------------RVQNGPVNKGINNIFFKTRMCAKFK
        MSFND+RGSVIPPPLH YG+NGDA+GCWSQ+PRNDPFD QSQFE QQPP+KRARNSEEN S                 N PVNKGI+NIFFKTRMCAKFK
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLS--------------RVQNGPVNKGINNIFFKTRMCAKFK

Query:  LGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVT
        LGLCRNGA+CNFAHG EDMRQPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTT T
Subjt:  LGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVT

Query:  PLMNGND-SSYSEPSRAVSCSASASDSLRGNGN---AFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAA
        PLMNG+D SSY EPSRA SC  S SD+LR NGN   +FWKTKLCTKWE+TGHCPFGDKCHFAHGQSELQL +GREGEVS  ALN+ P++VAMEAS SL  
Subjt:  PLMNGND-SSYSEPSRAVSCSASASDSLRGNGN---AFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAA

Query:  SVATSS-LPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE
        SV  SS LPEGQAKP LLKWKGPKKINRIYADWLDDLPLSP+S SK+E
Subjt:  SVATSS-LPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE

A0A6J1FBA3 zinc finger CCCH domain-containing protein 39-like3.5e-19198.48Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
        MSFNDIRGSVIPPPLHPYGA+ DATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH

Query:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
        GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
Subjt:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS

Query:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
        RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATS LPEGQAKPCLLK
Subjt:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK

Query:  WKGPKKINRIYADWLDDLPLSPTSASKLE
        WKGPKKINRIYADWLDDLPLSPTSASKLE
Subjt:  WKGPKKINRIYADWLDDLPLSPTSASKLE

A0A6J1G2M8 zinc finger CCCH domain-containing protein 39-like5.3e-16382.08Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL------------SRVQ--NGPVNKGINNIFFKTRMCAKFK
        MSFND+RGSVIPPPLH YGANGDA+GCWSQYPRND FD QSQFE QQPPFKRARN EEN             SRVQ  N P+NKGINNIFFKTRMCAKFK
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENL------------SRVQ--NGPVNKGINNIFFKTRMCAKFK

Query:  LGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVT
        LGLCRNGA+CNFAHG EDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTT T
Subjt:  LGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVT

Query:  PLMNGNDSSYSEPSRAVSCSASASDSLRGNGN---AFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAAS
        PL+NG+DSSY EP +A   S+S  D+LR NGN   +FWKTKLCTKWE+TGHCPFG+KCHFAHGQSELQLS+GREGEVSN ALN+ P+VVAMEA  SLA S
Subjt:  PLMNGNDSSYSEPSRAVSCSASASDSLRGNGN---AFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAAS

Query:  VATSSLPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE
        V +S+LPEGQAK  LLKWKGPKKINRIYADWLDDLPLSP+S S+LE
Subjt:  VATSSLPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE

A0A6J1HLD8 zinc finger CCCH domain-containing protein 39-like9.6e-18996.66Show/hide
Query:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
        M+FNDIRGSVIPPPLHPYGANGDATGCWSQYPRND FDTQSQFEPQ PPFKRARNSEEN SRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH
Subjt:  MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAH

Query:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
        GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS
Subjt:  GAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPS

Query:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK
        RAVSC   ASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREG+VSNPALNINP+VVAMEASPSLAASVATS LPEGQAKPCLLK
Subjt:  RAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLK

Query:  WKGPKKINRIYADWLDDLPLSPTSASKLE
        WKGPKKINRIYADWLDDLPLSPTSASKL+
Subjt:  WKGPKKINRIYADWLDDLPLSPTSASKLE

SwissProt top hitse value%identityAlignment
Q5PP65 Zinc finger CCCH domain-containing protein 283.0e-2227.19Show/hide
Query:  PPPLHPYGANGDATGCWSQYPRNDPFDT--QSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLC-RNGANCNFAHGAEDMR--
        PPP + +  +GD+    S +   D +        +  + P K+ R+S            +  I   FFKT++C KF+ G C  + ++C+FAH AE++R  
Subjt:  PPPLHPYGANGDATGCWSQYPRNDPFDT--QSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLC-RNGANCNFAHGAEDMR--

Query:  -QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSC
          PPPNWQE V                                                    ++ R RES A+S+G        GN             
Subjt:  -QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSC

Query:  SASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQ------------------LSLGREGEVSNPALNINPVVVAMEASPSLAASVATS
            + +L+      WKT++C KW+ TG+CPFG  CHFAHG SEL                   L   + G+V      ++P V       S   S A +
Subjt:  SASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQ------------------LSLGREGEVSNPALNINPVVVAMEASPSLAASVATS

Query:  SLPEGQAKPCLLKWKGPKKINRIYADWLDDL
          P G       KWKGP KI+R+Y DW+DD+
Subjt:  SLPEGQAKPCLLKWKGPKKINRIYADWLDDL

Q7XPK1 Zinc finger CCCH domain-containing protein 311.6e-1032.46Show/hide
Query:  KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCP
        K+K C KF++   CP+G+ C+F H  P  ++                 V   +N  + +   P+RA    A+  +S   +     KT++CTK+     C 
Subjt:  KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCP

Query:  FGDKCHFAHGQSEL
        FGDKCHFAHG+ EL
Subjt:  FGDKCHFAHGQSEL

Q84UQ3 Zinc finger CCCH domain-containing protein 569.6e-4532.2Show/hide
Query:  ANGDATGCW-------SQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNW
        A G   G W       SQ+  +      S+   +QPP  +            N   ++ I  +FFKT++C KF+ G C    NCNFAHG E++R+PPPNW
Subjt:  ANGDATGCW-------SQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNW

Query:  QEIVGIREDDQSVSNWNDDQKI--------------------------IQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVT
        QEIV   E+    +   ++ +I                            K + C+KFY  E CPYGD C FLH       D+  + RES AIS+  +V 
Subjt:  QEIVGIREDDQSVSNWNDDQKI--------------------------IQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVT

Query:  PLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINP---VVVAMEASPSLAAS
            G   SY+  + A + +++A+ +      + WKT++C KWE+TG+CPFG KCHFAHG +EL    G   ++ +      P     V    +P+  A+
Subjt:  PLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINP---VVVAMEASPSLAAS

Query:  VATSSLP--------------------EGQAKPCLLKWKGPKKINRIYADWLDD
         +T+ LP                     GQ +  + KWKGP KI+RIY DW+D+
Subjt:  VATSSLP--------------------EGQAKPCLLKWKGPKKINRIYADWLDD

Q9LQM3 Zinc finger CCCH domain-containing protein 124.0e-4331.78Show/hide
Query:  YGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVN---KGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQE
        +    D    W+  P N   D         PP K+ R S  + S       +   K I  +FFKT++C KF+ G C    NCNFAH  E++R+PPPNWQE
Subjt:  YGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVN---KGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQE

Query:  IVGIREDDQSVSNWNDDQKIIQ----------------------KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGN
        IV   E+++S         +++                      K + C+KFY  E CPYG+ C FLH       D++ R RES AIS+G    P   G+
Subjt:  IVGIREDDQSVSNWNDDQKIIQ----------------------KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGN

Query:  DSSYSEPSRAVSCSASASDSL-------RGNGNAF-------WKTKLCTKWEVTGHCPFGDKCHFAHGQSELQL-------SLGREGEVSNPALN-----
                 +V    S+S+ +        G+G+         WKT++C KWE+TG+CPFG KCHFAHG +EL           G++G   NP        
Subjt:  DSSYSEPSRAVSCSASASDSL-------RGNGNAF-------WKTKLCTKWEVTGHCPFGDKCHFAHGQSELQL-------SLGREGEVSNPALN-----

Query:  ----------INPVV---VAMEASPSLAASVATSSLPEGQAKPCLLKWKGPKKINRIYADWLDDL
                  ++P V           +A   A+S++ +        KWKGP KI+RIY DW+DD+
Subjt:  ----------INPVV---VAMEASPSLAASVATSSLPEGQAKPCLLKWKGPKKINRIYADWLDDL

Q9LT81 Zinc finger CCCH domain-containing protein 394.3e-7748.39Show/hide
Query:  DTQSQFEPQ---QPPFKRARNSEENLSRVQNG------------------PVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIV
        ++QSQ +P    QP  KR R  ++NL    +                   PVNKG  NIF+KTRMCAKF+ G CRNG  CNFAHG ED+RQPP NWQEIV
Subjt:  DTQSQFEPQ---QPPFKRARNSEENLSRVQNG------------------PVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIV

Query:  G------------IREDDQS--------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSY
        G             RE ++          +NW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS IS+G T     +   S+ 
Subjt:  G------------IREDDQS--------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSY

Query:  SEPSRAVSCSASASDSLRG-NGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGR-EGEVSNPALNIN--PVVVAMEA---SPSLAASVATSSL
         E +R  S    A  +  G     +WKT+LC K+++TG CPFGDKCHFAHGQ+EL  S+GR EGE  N   ++N   VV A EA    P    +  +S L
Subjt:  SEPSRAVSCSASASDSLRG-NGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGR-EGEVSNPALNIN--PVVVAMEA---SPSLAASVATSSL

Query:  -PEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE
          EG+ K CLLKW   KKINRIY DW+DDLP+   S   +E
Subjt:  -PEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE

Arabidopsis top hitse value%identityAlignment
AT1G32360.1 Zinc finger (CCCH-type) family protein2.9e-4431.78Show/hide
Query:  YGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVN---KGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQE
        +    D    W+  P N   D         PP K+ R S  + S       +   K I  +FFKT++C KF+ G C    NCNFAH  E++R+PPPNWQE
Subjt:  YGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVN---KGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQE

Query:  IVGIREDDQSVSNWNDDQKIIQ----------------------KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGN
        IV   E+++S         +++                      K + C+KFY  E CPYG+ C FLH       D++ R RES AIS+G    P   G+
Subjt:  IVGIREDDQSVSNWNDDQKIIQ----------------------KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGN

Query:  DSSYSEPSRAVSCSASASDSL-------RGNGNAF-------WKTKLCTKWEVTGHCPFGDKCHFAHGQSELQL-------SLGREGEVSNPALN-----
                 +V    S+S+ +        G+G+         WKT++C KWE+TG+CPFG KCHFAHG +EL           G++G   NP        
Subjt:  DSSYSEPSRAVSCSASASDSL-------RGNGNAF-------WKTKLCTKWEVTGHCPFGDKCHFAHGQSELQL-------SLGREGEVSNPALN-----

Query:  ----------INPVV---VAMEASPSLAASVATSSLPEGQAKPCLLKWKGPKKINRIYADWLDDL
                  ++P V           +A   A+S++ +        KWKGP KI+RIY DW+DD+
Subjt:  ----------INPVV---VAMEASPSLAASVATSSLPEGQAKPCLLKWKGPKKINRIYADWLDDL

AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.6e-0528.04Show/hide
Query:  KTRMCAKF-KLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRES
        KT +C K+ + G C  G +C FAHG +++R           IR                 K ++CR    G+ CPYG RC+F H    + +  +  F+  
Subjt:  KTRMCAKF-KLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRES

Query:  SAISIGT
        S++ + T
Subjt:  SAISIGT

AT1G68200.2 Zinc finger C-x8-C-x5-C-x3-H type family protein2.6e-0528.04Show/hide
Query:  KTRMCAKF-KLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRES
        KT +C K+ + G C  G +C FAHG +++R           IR                 K ++CR    G+ CPYG RC+F H    + +  +  F+  
Subjt:  KTRMCAKF-KLGLCRNGANCNFAHGAEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRES

Query:  SAISIGT
        S++ + T
Subjt:  SAISIGT

AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.1e-2327.19Show/hide
Query:  PPPLHPYGANGDATGCWSQYPRNDPFDT--QSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLC-RNGANCNFAHGAEDMR--
        PPP + +  +GD+    S +   D +        +  + P K+ R+S            +  I   FFKT++C KF+ G C  + ++C+FAH AE++R  
Subjt:  PPPLHPYGANGDATGCWSQYPRNDPFDT--QSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLC-RNGANCNFAHGAEDMR--

Query:  -QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSC
          PPPNWQE V                                                    ++ R RES A+S+G        GN             
Subjt:  -QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSC

Query:  SASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQ------------------LSLGREGEVSNPALNINPVVVAMEASPSLAASVATS
            + +L+      WKT++C KW+ TG+CPFG  CHFAHG SEL                   L   + G+V      ++P V       S   S A +
Subjt:  SASASDSLRGNGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQ------------------LSLGREGEVSNPALNINPVVVAMEASPSLAASVATS

Query:  SLPEGQAKPCLLKWKGPKKINRIYADWLDDL
          P G       KWKGP KI+R+Y DW+DD+
Subjt:  SLPEGQAKPCLLKWKGPKKINRIYADWLDDL

AT3G19360.1 Zinc finger (CCCH-type) family protein3.0e-7848.39Show/hide
Query:  DTQSQFEPQ---QPPFKRARNSEENLSRVQNG------------------PVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIV
        ++QSQ +P    QP  KR R  ++NL    +                   PVNKG  NIF+KTRMCAKF+ G CRNG  CNFAHG ED+RQPP NWQEIV
Subjt:  DTQSQFEPQ---QPPFKRARNSEENLSRVQNG------------------PVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPPNWQEIV

Query:  G------------IREDDQS--------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSY
        G             RE ++          +NW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS IS+G T     +   S+ 
Subjt:  G------------IREDDQS--------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSY

Query:  SEPSRAVSCSASASDSLRG-NGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGR-EGEVSNPALNIN--PVVVAMEA---SPSLAASVATSSL
         E +R  S    A  +  G     +WKT+LC K+++TG CPFGDKCHFAHGQ+EL  S+GR EGE  N   ++N   VV A EA    P    +  +S L
Subjt:  SEPSRAVSCSASASDSLRG-NGNAFWKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGR-EGEVSNPALNIN--PVVVAMEA---SPSLAASVATSSL

Query:  -PEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE
          EG+ K CLLKW   KKINRIY DW+DDLP+   S   +E
Subjt:  -PEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCAATGATATTCGAGGCTCTGTTATACCGCCGCCTCTGCATCCTTATGGAGCCAATGGCGATGCCACTGGTTGCTGGTCTCAGTATCCTAGGAACGATCCATT
TGATACACAATCGCAATTTGAACCACAGCAGCCTCCATTCAAAAGAGCTAGAAATTCTGAAGAAAACCTATCTAGAGTTCAAAATGGTCCAGTGAATAAAGGAATAAACA
ATATCTTCTTCAAGACAAGGATGTGTGCGAAATTCAAGCTTGGTTTGTGTAGGAATGGAGCGAATTGCAACTTTGCTCATGGTGCTGAAGACATGCGACAACCCCCACCA
AATTGGCAAGAAATTGTGGGGATTCGTGAGGATGATCAATCAGTAAGTAACTGGAATGATGATCAGAAAATTATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGG
GGAGGAATGCCCTTATGGAGATAGGTGCAATTTTCTTCATGAAGATCCTGCTAAATTTAGAGATGATTCTGGTAGGTTTAGGGAAAGTTCAGCTATAAGCATTGGAACTA
CTGTAACTCCATTGATGAATGGTAATGATTCTAGCTATTCTGAACCTAGCAGAGCTGTTTCTTGTTCTGCTTCTGCTTCTGATTCTCTTCGAGGTAATGGAAATGCATTC
TGGAAGACGAAGTTATGCACTAAGTGGGAGGTTACTGGTCATTGCCCCTTTGGTGATAAGTGCCATTTTGCTCATGGCCAATCTGAGTTACAACTCTCACTTGGACGCGA
GGGGGAAGTATCTAATCCTGCCCTCAACATTAATCCTGTAGTTGTGGCCATGGAAGCATCTCCGAGTTTGGCAGCGAGTGTCGCGACCTCTTCCCTACCAGAGGGTCAGG
CGAAGCCGTGCTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTTGATGATTTGCCTCTATCTCCAACCTCAGCCAGCAAATTGGAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCAATGATATTCGAGGCTCTGTTATACCGCCGCCTCTGCATCCTTATGGAGCCAATGGCGATGCCACTGGTTGCTGGTCTCAGTATCCTAGGAACGATCCATT
TGATACACAATCGCAATTTGAACCACAGCAGCCTCCATTCAAAAGAGCTAGAAATTCTGAAGAAAACCTATCTAGAGTTCAAAATGGTCCAGTGAATAAAGGAATAAACA
ATATCTTCTTCAAGACAAGGATGTGTGCGAAATTCAAGCTTGGTTTGTGTAGGAATGGAGCGAATTGCAACTTTGCTCATGGTGCTGAAGACATGCGACAACCCCCACCA
AATTGGCAAGAAATTGTGGGGATTCGTGAGGATGATCAATCAGTAAGTAACTGGAATGATGATCAGAAAATTATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGG
GGAGGAATGCCCTTATGGAGATAGGTGCAATTTTCTTCATGAAGATCCTGCTAAATTTAGAGATGATTCTGGTAGGTTTAGGGAAAGTTCAGCTATAAGCATTGGAACTA
CTGTAACTCCATTGATGAATGGTAATGATTCTAGCTATTCTGAACCTAGCAGAGCTGTTTCTTGTTCTGCTTCTGCTTCTGATTCTCTTCGAGGTAATGGAAATGCATTC
TGGAAGACGAAGTTATGCACTAAGTGGGAGGTTACTGGTCATTGCCCCTTTGGTGATAAGTGCCATTTTGCTCATGGCCAATCTGAGTTACAACTCTCACTTGGACGCGA
GGGGGAAGTATCTAATCCTGCCCTCAACATTAATCCTGTAGTTGTGGCCATGGAAGCATCTCCGAGTTTGGCAGCGAGTGTCGCGACCTCTTCCCTACCAGAGGGTCAGG
CGAAGCCGTGCTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTTGATGATTTGCCTCTATCTCCAACCTCAGCCAGCAAATTGGAG
Protein sequenceShow/hide protein sequence
MSFNDIRGSVIPPPLHPYGANGDATGCWSQYPRNDPFDTQSQFEPQQPPFKRARNSEENLSRVQNGPVNKGINNIFFKTRMCAKFKLGLCRNGANCNFAHGAEDMRQPPP
NWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTVTPLMNGNDSSYSEPSRAVSCSASASDSLRGNGNAF
WKTKLCTKWEVTGHCPFGDKCHFAHGQSELQLSLGREGEVSNPALNINPVVVAMEASPSLAASVATSSLPEGQAKPCLLKWKGPKKINRIYADWLDDLPLSPTSASKLE