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Carg17519 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17519
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
Genome locationCarg_Chr12:11396756..11399014
RNA-Seq ExpressionCarg17519
SyntenyCarg17519
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586407.1 hypothetical protein SDJN03_19140, partial [Cucurbita argyrosperma subsp. sororia]1.1e-55100Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
        MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL

Query:  GKGYE
        GKGYE
Subjt:  GKGYE

KAG7021261.1 hypothetical protein SDJN02_17949 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-56100Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
        MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV

XP_008457839.1 PREDICTED: uncharacterized protein LOC103497424 [Cucumis melo]1.1e-5092.45Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
        M+PRQLRTIFTGAAVI GGI TL  ASFLTIQTLR TAEAKRRKIALPC+ACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQ CLNCL
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV

XP_022142951.1 uncharacterized protein LOC111012944 [Momordica charantia]1.1e-5091.51Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
        M+PRQLRT+FTGAAVI GGI TL FASFLTIQTLR TAEAKRRKIALPC+ACRGKGFYICKLCRGNAVI WSPLSDPIAMNPCVCPTCEGNRVQ CLNCL
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV

XP_038889623.1 uncharacterized protein LOC120079492 [Benincasa hispida]1.8e-5090.57Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
        M+P+QLRT+FTGAAVI GGI TL FASFLTIQTLR TAEAKRRKIALPC+ACRGKGFYICKLC+GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQ CLNCL
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV

TrEMBL top hitse value%identityAlignment
A0A0A0LI05 Uncharacterized protein3.3e-5090.57Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
        M+PRQLRTIFTGAAVI GGI TL  ASFLTIQTLR TAEAKRRKI LPC+ACRGKGFY+CKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQ CLNCL
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV

A0A1S3C6K9 uncharacterized protein LOC1034974245.1e-5192.45Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
        M+PRQLRTIFTGAAVI GGI TL  ASFLTIQTLR TAEAKRRKIALPC+ACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQ CLNCL
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV

A0A5D3BFD4 Uncharacterized protein3.3e-4292.39Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR
        M+PRQLRTIFTGAAVI GGI TL  ASFLTIQTLR TAEAKRRKIALPC+ACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR

A0A6J1CNQ8 uncharacterized protein LOC1110129445.1e-5191.51Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
        M+PRQLRT+FTGAAVI GGI TL FASFLTIQTLR TAEAKRRKIALPC+ACRGKGFYICKLCRGNAVI WSPLSDPIAMNPCVCPTCEGNRVQ CLNCL
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV

A0A6P4BUI7 uncharacterized protein LOC1074359335.7e-4274.29Show/hide
Query:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL
        M+P+QLRT+ TGAAVI GGIFTL   S  TI TLR   EAKRRK+ALPCR C+GKGFYIC+LC+GNA IQWSPL DP+A+NPC+CPTC+GNRVQ CLNCL
Subjt:  MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCL

Query:  GKGYE
        GKGY+
Subjt:  GKGYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G20220.1 zinc knuckle (CCHC-type) family protein6.1e-0438.18Show/hide
Query:  LPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCLG
        LPC  CRG+G+  C  C     I+ S L          CP C+G  +  CL CLG
Subjt:  LPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCLG

AT5G20220.2 zinc knuckle (CCHC-type) family protein6.1e-0438.18Show/hide
Query:  LPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCLG
        LPC  CRG+G+  C  C     I+ S L          CP C+G  +  CL CLG
Subjt:  LPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACCACGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTAATCTTCGGCGGAATTTTCACTCTTAGGTTCGCTTCCTTTCTCACTATCCAAACGCTCCGCCACAC
CGCCGAAGCCAAACGGAGAAAAATCGCTTTGCCCTGTAGGGCTTGTAGAGGAAAAGGATTCTATATTTGCAAATTATGCCGCGGAAATGCAGTCATTCAGTGGTCGCCAT
TGTCCGATCCTATTGCCATGAACCCCTGCGTGTGCCCGACTTGTGAGGGAAATAGGGTGCAGCATTGCCTAAACTGCCTAGGAAAAGGATATGAAGTATGA
mRNA sequenceShow/hide mRNA sequence
TATTTTATCCGGTTCGGGAGACTCTCTCAACTTCCTAGTTCACCAGCAATGGTACCACGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTAATCTTCGGCGGAATTTT
CACTCTTAGGTTCGCTTCCTTTCTCACTATCCAAACGCTCCGCCACACCGCCGAAGCCAAACGGAGAAAAATCGCTTTGCCCTGTAGGGCTTGTAGAGGAAAAGGATTCT
ATATTTGCAAATTATGCCGCGGAAATGCAGTCATTCAGTGGTCGCCATTGTCCGATCCTATTGCCATGAACCCCTGCGTGTGCCCGACTTGTGAGGGAAATAGGGTGCAG
CATTGCCTAAACTGCCTAGGAAAAGGATATGAAGTATGATTGACCTTGTGTAAATTCCATCAGAAATCGGCGAAAATACGAATGAACGATCGAAAGGTGTCTCTTTCAGC
TGAAGAAAGGTCATTTCATTGCTTAAACTGCCATCCACACCTCAGTTATTTGCATATAAGGTTACTTGTGATTGTGAAATCTTTGAGATTGTTCATTCTTTCATGATTAA
AGTATATGTTGGCAGAGCATTCACAGTTCCATTGCTTGTTCTTCTTTTTAGTTTGGTGGGTGGAAAGTTAATCTGACAAGCTTGAATCATGTGATGGAATGGAAGAAGAC
AAGTTGTTTTTAGGTAGAAAAACATGTAAAATGGTCTCTCT
Protein sequenceShow/hide protein sequence
MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCLGKGYEV