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Carg17522 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17522
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:11427551..11428119
RNA-Seq ExpressionCarg17522
SyntenyCarg17522
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586409.1 hypothetical protein SDJN03_19142, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4899.07Show/hide
Query:  MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
        MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAA RRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
Subjt:  MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA

Query:  FAHGFYLV
        FAHGFYLV
Subjt:  FAHGFYLV

KAG7021264.1 hypothetical protein SDJN02_17952, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-63100Show/hide
Query:  MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
        MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
Subjt:  MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA

Query:  FAHGFYLVYPFISCICFDHCSYHCNANS
        FAHGFYLVYPFISCICFDHCSYHCNANS
Subjt:  FAHGFYLVYPFISCICFDHCSYHCNANS

XP_022938302.1 uncharacterized protein LOC111444436 [Cucurbita moschata]1.0e-4798.15Show/hide
Query:  MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
        MIL FVSIYQDLVAPSLWAEVDFPIAAAARLSPPAA RRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
Subjt:  MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA

Query:  FAHGFYLV
        FAHGFYLV
Subjt:  FAHGFYLV

XP_022966034.1 uncharacterized protein LOC111465738 [Cucurbita maxima]9.9e-27100Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV

XP_038891090.1 uncharacterized protein LOC120080491 isoform X1 [Benincasa hispida]7.1e-2588.41Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPF
        MA+P+DP+SREA P+K+SAPFKFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVY F
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPF

TrEMBL top hitse value%identityAlignment
A0A0A0LF45 Uncharacterized protein5.5e-2390.48Show/hide
Query:  PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        P DP+SREAFP+K+SAP+KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV

A0A1S3C7Y6 uncharacterized protein LOC1034975032.5e-2391.04Show/hide
Query:  MAS-PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MAS P DP+SREAFP+K+SAPFKFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MAS-PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV

A0A6J1FDN8 uncharacterized protein LOC1114444364.9e-4898.15Show/hide
Query:  MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
        MIL FVSIYQDLVAPSLWAEVDFPIAAAARLSPPAA RRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
Subjt:  MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA

Query:  FAHGFYLV
        FAHGFYLV
Subjt:  FAHGFYLV

A0A6J1HSI9 uncharacterized protein LOC1114657384.8e-27100Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV

A0A6J1KDE7 uncharacterized protein LOC1114938832.7e-2286.36Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MA+P+D  SRE  PKK+SAP KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68680.1 unknown protein8.9e-1869.7Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MAS  DP+      KKK AP KFLVPLIYAP LPLIR++LR  PV+RDRLF  VL GAFAHGFYLV
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCTAGATTTTGTTTCAATATACCAAGATCTTGTGGCTCCATCCCTGTGGGCTGAAGTTGATTTTCCAATAGCCGCCGCCGCTCGCCTCTCGCCGCCCGCCGCTCG
CCGCCGCACCTCCGCCATGGCCTCCCCCTACGATCCCACTTCTCGGGAGGCGTTTCCTAAGAAGAAATCAGCCCCATTCAAGTTCTTGGTTCCTCTCATCTATGCCCCTG
TTCTTCCTCTCATTAGAATTGCGCTGCGGAAGAATCCTGTTGTGAGGGATCGGCTTTTCACGGCGGTTTTAGCTGGTGCTTTTGCCCATGGCTTTTACCTGGTGTATCCT
TTTATCTCTTGCATTTGCTTTGATCATTGTTCATATCATTGCAATGCGAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCTAGATTTTGTTTCAATATACCAAGATCTTGTGGCTCCATCCCTGTGGGCTGAAGTTGATTTTCCAATAGCCGCCGCCGCTCGCCTCTCGCCGCCCGCCGCTCG
CCGCCGCACCTCCGCCATGGCCTCCCCCTACGATCCCACTTCTCGGGAGGCGTTTCCTAAGAAGAAATCAGCCCCATTCAAGTTCTTGGTTCCTCTCATCTATGCCCCTG
TTCTTCCTCTCATTAGAATTGCGCTGCGGAAGAATCCTGTTGTGAGGGATCGGCTTTTCACGGCGGTTTTAGCTGGTGCTTTTGCCCATGGCTTTTACCTGGTGTATCCT
TTTATCTCTTGCATTTGCTTTGATCATTGTTCATATCATTGCAATGCGAATTCTTGA
Protein sequenceShow/hide protein sequence
MILDFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAARRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYP
FISCICFDHCSYHCNANS