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Carg17523 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17523
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:10141977..10144255
RNA-Seq ExpressionCarg17523
SyntenyCarg17523
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021085.1 hypothetical protein SDJN02_17773, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-42100Show/hide
Query:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETRHLGADGHWRFSRGTCDADSSDETAFQSRETVKAPLQ
        MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETRHLGADGHWRFSRGTCDADSSDETAFQSRETVKAPLQ
Subjt:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETRHLGADGHWRFSRGTCDADSSDETAFQSRETVKAPLQ

KAG7024750.1 YTH domain-containing family protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0665.38Show/hide
Query:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR
        ME L L GK +++       PAAASDTNSKPTEVVTVGSMPIK+   NTETR
Subjt:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR

XP_022930423.1 uncharacterized protein LOC111436874 isoform X1 [Cucurbita moschata]3.0e-0663.46Show/hide
Query:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR
        ME L L GK +++       PAAASDTNSKPTEV+TVGSMPIK+   NTETR
Subjt:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR

XP_022930424.1 uncharacterized protein LOC111436874 isoform X2 [Cucurbita moschata]3.0e-0663.46Show/hide
Query:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR
        ME L L GK +++       PAAASDTNSKPTEV+TVGSMPIK+   NTETR
Subjt:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR

XP_023514382.1 uncharacterized protein LOC111778663 isoform X2 [Cucurbita pepo subsp. pepo]3.0e-0663.46Show/hide
Query:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR
        ME L L GK +++       PAAASDTNSKPTEV+TVGSMPIK+   NTETR
Subjt:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR

TrEMBL top hitse value%identityAlignment
A0A6J1ERD3 uncharacterized protein LOC111436874 isoform X21.4e-0663.46Show/hide
Query:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR
        ME L L GK +++       PAAASDTNSKPTEV+TVGSMPIK+   NTETR
Subjt:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR

A0A6J1EV47 uncharacterized protein LOC111436874 isoform X11.4e-0663.46Show/hide
Query:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR
        ME L L GK +++       PAAASDTNSKPTEV+TVGSMPIK+   NTETR
Subjt:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR

A0A6J1KCL9 uncharacterized protein LOC111494395 isoform X26.0e-0561.54Show/hide
Query:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR
        +E L L GK +++       PAAASDTNSKPTEV+TVGSMPIK+   NTETR
Subjt:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR

A0A6J1KEX6 uncharacterized protein LOC111494395 isoform X16.0e-0561.54Show/hide
Query:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR
        +E L L GK +++       PAAASDTNSKPTEV+TVGSMPIK+   NTETR
Subjt:  MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATACTTGAACTTGGCGGGAAAGTGGTTGAAAAGACTTCAGGAGGAGGAGCTACAACCAGCTGCTGCAAGTGATACAAATTCCAAACCTACTGAAGTTGTGACCGT
AGGTTCGATGCCAATCAAATTAATGGATAATAATACTGAAACTCGTCATTTGGGAGCAGATGGACATTGGAGATTTAGTCGAGGAACTTGTGACGCGGACTCTTCAGATG
AGACAGCGTTCCAATCACGGGAAACAGTGAAGGCTCCGCTTCAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATACTTGAACTTGGCGGGAAAGTGGTTGAAAAGACTTCAGGAGGAGGAGCTACAACCAGCTGCTGCAAGTGATACAAATTCCAAACCTACTGAAGTTGTGACCGT
AGGTTCGATGCCAATCAAATTAATGGATAATAATACTGAAACTCGTCATTTGGGAGCAGATGGACATTGGAGATTTAGTCGAGGAACTTGTGACGCGGACTCTTCAGATG
AGACAGCGTTCCAATCACGGGAAACAGTGAAGGCTCCGCTTCAG
Protein sequenceShow/hide protein sequence
MEYLNLAGKWLKRLQEEELQPAAASDTNSKPTEVVTVGSMPIKLMDNNTETRHLGADGHWRFSRGTCDADSSDETAFQSRETVKAPLQ