; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17553 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17553
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGPI-anchored protein-like protein
Genome locationCarg_Chr12:10327932..10331853
RNA-Seq ExpressionCarg17553
SyntenyCarg17553
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021115.1 putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-85100Show/hide
Query:  MHSSILSRGHNYRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLV
        MHSSILSRGHNYRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLV
Subjt:  MHSSILSRGHNYRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLV

Query:  IALGTDALGGSYSAGVSRIQNIGRLHNGLALPQTWLLPLQCCPWLAAIVVLSTWRWT
        IALGTDALGGSYSAGVSRIQNIGRLHNGLALPQTWLLPLQCCPWLAAIVVLSTWRWT
Subjt:  IALGTDALGGSYSAGVSRIQNIGRLHNGLALPQTWLLPLQCCPWLAAIVVLSTWRWT

KGN60925.2 hypothetical protein Csa_023463 [Cucumis sativus]2.4e-3568.75Show/hide
Query:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
        Y  L  S  I+GD LLP NQSQLP+ +HYSRKC+VNLNHT+D VILP+YVPNS  +L+L  C HS A KYL NATYTRVGLA N+DCLVIALGTDA+ GS
Subjt:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS

Query:  YSAGVSRIQNIG
        YSAG+S + +IG
Subjt:  YSAGVSRIQNIG

XP_008454795.1 PREDICTED: uncharacterized GPI-anchored protein At3g06035-like isoform X1 [Cucumis melo]3.2e-3570.37Show/hide
Query:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
        Y  L  S  I+GD LLPSNQSQLPLFT YSRKC+VNLNHT+D VILP++VPNS  +L+L  C HS A KYL NATYT VGLA N+DCLVIALGTDA+ GS
Subjt:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS

Query:  YSAGVSRI
        YSAG+S +
Subjt:  YSAGVSRI

XP_022938135.1 uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata]5.8e-5393.04Show/hide
Query:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
        Y  L  SRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHS ASKYLGN TYTRVGLAKNKDCLVIALGTDALGGS
Subjt:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS

Query:  YSAGVSRIQNIGRLH
        YSAGVSRIQNIGR++
Subjt:  YSAGVSRIQNIGRLH

XP_022965956.1 uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima]3.5e-5089.57Show/hide
Query:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
        Y  L  SRTI+GDALLPSNQSQLPLFTHYS KCQVNLNHTLDAVILPIYVPNSE  LVLAGCKHS ASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
Subjt:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS

Query:  YSAGVSRIQNIGRLH
        YSAGVS+IQNIGR++
Subjt:  YSAGVSRIQNIGRLH

TrEMBL top hitse value%identityAlignment
A0A0A0LGC0 Uncharacterized protein1.2e-3568.75Show/hide
Query:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
        Y  L  S  I+GD LLP NQSQLP+ +HYSRKC+VNLNHT+D VILP+YVPNS  +L+L  C HS A KYL NATYTRVGLA N+DCLVIALGTDA+ GS
Subjt:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS

Query:  YSAGVSRIQNIG
        YSAG+S + +IG
Subjt:  YSAGVSRIQNIG

A0A1S3BZI4 uncharacterized GPI-anchored protein At3g06035-like isoform X11.5e-3570.37Show/hide
Query:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
        Y  L  S  I+GD LLPSNQSQLPLFT YSRKC+VNLNHT+D VILP++VPNS  +L+L  C HS A KYL NATYT VGLA N+DCLVIALGTDA+ GS
Subjt:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS

Query:  YSAGVSRI
        YSAG+S +
Subjt:  YSAGVSRI

A0A6J1FIU6 uncharacterized GPI-anchored protein At3g06035-like2.8e-5393.04Show/hide
Query:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
        Y  L  SRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHS ASKYLGN TYTRVGLAKNKDCLVIALGTDALGGS
Subjt:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS

Query:  YSAGVSRIQNIGRLH
        YSAGVSRIQNIGR++
Subjt:  YSAGVSRIQNIGRLH

A0A6J1HN23 uncharacterized GPI-anchored protein At3g06035-like1.7e-5089.57Show/hide
Query:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
        Y  L  SRTI+GDALLPSNQSQLPLFTHYS KCQVNLNHTLDAVILPIYVPNSE  LVLAGCKHS ASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
Subjt:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS

Query:  YSAGVSRIQNIGRLH
        YSAGVS+IQNIGR++
Subjt:  YSAGVSRIQNIGRLH

A6YTC6 GPI-anchored protein-like protein1.5e-3570.37Show/hide
Query:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS
        Y  L  S  I+GD LLPSNQSQLPLFT YSRKC+VNLNHT+D VILP++VPNS  +L+L  C HS A KYL NATYT VGLA N+DCLVIALGTDA+ GS
Subjt:  YRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGS

Query:  YSAGVSRI
        YSAG+S +
Subjt:  YSAGVSRI

SwissProt top hitse value%identityAlignment
Q84MC0 Uncharacterized GPI-anchored protein At3g060353.1e-0931.19Show/hide
Query:  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNI
        G A +P  + Q   +     KC +N++ T D  I+P  VP  E+ LVL     S  S  L ++ +T +G+ K  D +V+ L T+   GSYS      Q  
Subjt:  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNI

Query:  GRLHNGLAL
             G+ L
Subjt:  GRLHNGLAL

Arabidopsis top hitse value%identityAlignment
AT1G54860.1 Glycoprotein membrane precursor GPI-anchored7.1e-0932.56Show/hide
Query:  PLFTHYS---RKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVS
        P  T+Y     +C+++ N T D +ILP+ +PN    L L     +  ++YL ++ Y   G+   K+ +V+ L T   GGS++AGV+
Subjt:  PLFTHYS---RKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVS

AT3G06035.1 Glycoprotein membrane precursor GPI-anchored2.2e-1031.19Show/hide
Query:  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNI
        G A +P  + Q   +     KC +N++ T D  I+P  VP  E+ LVL     S  S  L ++ +T +G+ K  D +V+ L T+   GSYS      Q  
Subjt:  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNI

Query:  GRLHNGLAL
             G+ L
Subjt:  GRLHNGLAL

AT5G19240.1 Glycoprotein membrane precursor GPI-anchored8.1e-0531.18Show/hide
Query:  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKD--CLVIALGTDALGGSYS
        G A +P     +P F +   KC++N N T D +IL +  P   +   L+   +   +K L ++ +T  G+  + D   LV  L T+  GGSYS
Subjt:  GDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKD--CLVIALGTDALGGSYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCATCGATTCTCTCGAGAGGTCACAATTACCGCAACCTTTTCTCCAGTCGAACCATCGACGGTGACGCCCTTTTGCCATCGAACCAAAGCCAACTTCCATTGTT
CACTCATTACTCAAGAAAGTGCCAAGTTAACCTCAATCATACACTAGACGCTGTTATTTTACCCATATACGTGCCTAACTCAGAAGCTGAGCTTGTGCTTGCTGGCTGCA
AACATTCTCATGCTTCAAAGTACTTGGGTAATGCAACTTATACAAGGGTAGGCCTTGCAAAAAATAAAGATTGTTTGGTGATTGCTTTGGGTACTGATGCACTTGGTGGA
AGCTATTCTGCTGGTGTCTCTCGGATTCAAAATATCGGTCGGCTGCATAATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACAGTGTTGCCCGTGGCTTGCTGC
TATTGTCGTGCTCAGTACATGGCGATGGACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTCATCGATTCTCTCGAGAGGTCACAATTACCGCAACCTTTTCTCCAGTCGAACCATCGACGGTGACGCCCTTTTGCCATCGAACCAAAGCCAACTTCCATTGTT
CACTCATTACTCAAGAAAGTGCCAAGTTAACCTCAATCATACACTAGACGCTGTTATTTTACCCATATACGTGCCTAACTCAGAAGCTGAGCTTGTGCTTGCTGGCTGCA
AACATTCTCATGCTTCAAAGTACTTGGGTAATGCAACTTATACAAGGGTAGGCCTTGCAAAAAATAAAGATTGTTTGGTGATTGCTTTGGGTACTGATGCACTTGGTGGA
AGCTATTCTGCTGGTGTCTCTCGGATTCAAAATATCGGTCGGCTGCATAATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACAGTGTTGCCCGTGGCTTGCTGC
TATTGTCGTGCTCAGTACATGGCGATGGACCTAG
Protein sequenceShow/hide protein sequence
MHSSILSRGHNYRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGG
SYSAGVSRIQNIGRLHNGLALPQTWLLPLQCCPWLAAIVVLSTWRWT