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Carg17568 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17568
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionvesicle-associated protein 2-2-like
Genome locationCarg_Chr12:10439936..10441104
RNA-Seq ExpressionCarg17568
SyntenyCarg17568
Gene Ontology termsGO:0061817 - endoplasmic reticulum-plasma membrane tethering (biological process)
GO:0090158 - endoplasmic reticulum membrane organization (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021130.1 hypothetical protein SDJN02_17818, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-40100Show/hide
Query:  MLSWWYAFEMVEMMPLRSLFETSLFENLKFLKSPLSRETDFRDDEVFLKIEMGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        MLSWWYAFEMVEMMPLRSLFETSLFENLKFLKSPLSRETDFRDDEVFLKIEMGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
Subjt:  MLSWWYAFEMVEMMPLRSLFETSLFENLKFLKSPLSRETDFRDDEVFLKIEMGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

XP_004139205.1 vesicle-associated protein 2-2 isoform X2 [Cucumis sativus]2.2e-0679.41Show/hide
Query:  MSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        +SRRGRASN+VGFPPLF+CMVALICIVFG++L +
Subjt:  MSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

XP_022937988.1 vesicle-associated protein 2-2-like [Cucurbita moschata]2.3e-1177.19Show/hide
Query:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        S LS E  F   EV    E  MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
Subjt:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

XP_022965742.1 vesicle-associated protein 2-2-like [Cucurbita maxima]2.3e-1177.19Show/hide
Query:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        S LS E  F   EV    E  MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
Subjt:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

XP_023538184.1 vesicle-associated protein 2-2-like [Cucurbita pepo subsp. pepo]2.3e-1177.19Show/hide
Query:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        S LS E  F   EV    E  MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
Subjt:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

TrEMBL top hitse value%identityAlignment
A0A0A0LIH5 MSP domain-containing protein1.1e-0679.41Show/hide
Query:  MSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        +SRRGRASN+VGFPPLF+CMVALICIVFG++L +
Subjt:  MSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

A0A6J1FHK4 vesicle-associated protein 2-2-like1.1e-1177.19Show/hide
Query:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        S LS E  F   EV    E  MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
Subjt:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

A0A6J1G3A5 vesicle-associated protein 2-2-like isoform X15.4e-0669.44Show/hide
Query:  MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        M +SR+GRASN+VGFPPLF+CMVALIC+V G++L +
Subjt:  MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

A0A6J1HL55 vesicle-associated protein 2-2-like1.1e-1177.19Show/hide
Query:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        S LS E  F   EV    E  MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
Subjt:  SPLSRETDFRDDEVFLKIE--MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

A0A6J1KGT7 vesicle-associated protein 2-2-like isoform X15.4e-0669.44Show/hide
Query:  MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY
        M +SR+GRASN+VGFPPLF+CMVALIC+V G++L +
Subjt:  MGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCTTGGTGGTATGCATTTGAGATGGTTGAAATGATGCCTCTGAGATCCTTGTTTGAAACTTCCTTGTTTGAAAATTTGAAATTCTTAAAATCCCCGTTGTCTCG
TGAAACCGACTTCAGAGACGATGAAGTCTTCTTAAAGATTGAGATGGGAATGAGTAGGCGAGGCAGGGCGAGCAATCGTGTCGGTTTTCCTCCTCTGTTTCTCTGTATGG
TGGCGCTTATTTGCATTGTGTTCGGATACCTTTTGCGCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATCTTGGTGGTATGCATTTGAGATGGTTGAAATGATGCCTCTGAGATCCTTGTTTGAAACTTCCTTGTTTGAAAATTTGAAATTCTTAAAATCCCCGTTGTCTCG
TGAAACCGACTTCAGAGACGATGAAGTCTTCTTAAAGATTGAGATGGGAATGAGTAGGCGAGGCAGGGCGAGCAATCGTGTCGGTTTTCCTCCTCTGTTTCTCTGTATGG
TGGCGCTTATTTGCATTGTGTTCGGATACCTTTTGCGCTATTGAAGAACCGAAGGCGCTGATCGGGAGCGGTGAAGAGAGAGCGGAGAAGACATGTAAAGGAATTATCTT
ACTTTATGTAGATAGAATGGTAGCTCTAGGGATGTTGTGTGTTGTCAATAAGAATAAAGCCCCTCATTCA
Protein sequenceShow/hide protein sequence
MLSWWYAFEMVEMMPLRSLFETSLFENLKFLKSPLSRETDFRDDEVFLKIEMGMSRRGRASNRVGFPPLFLCMVALICIVFGYLLRY