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Carg17586 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17586
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:10600476..10601932
RNA-Seq ExpressionCarg17586
SyntenyCarg17586
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586299.1 Serine/threonine-protein kinase Nek2, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3197.65Show/hide
Query:  RILSSSVFFVSFGVTAKVSNNGESPSLSSSPSPSASLCLPFASKTVSFLVSSVATSPNPVFFFFFFFFFFFFYICLDPHFYFHFQ
        RILSSSVFFVSFGVTAKVSNNGESPSLSSSPSPSASLCLPFASKTVSFLVSSVATSPNPV  FFFFFFFFFFYICLDPHFYFHFQ
Subjt:  RILSSSVFFVSFGVTAKVSNNGESPSLSSSPSPSASLCLPFASKTVSFLVSSVATSPNPVFFFFFFFFFFFFYICLDPHFYFHFQ

KAG7016581.1 NAC domain-containing protein 86, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-1054.67Show/hide
Query:  RDPAFLLTLVPFSNRYGT-PNPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTI-CNTQNPPLADIVLFGL
        R P + LTL P SNR GT P   P   +VL  TPPRV+P+ G+   LAH  +S S+TI CN  +PPLADI+LFGL
Subjt:  RDPAFLLTLVPFSNRYGT-PNPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTI-CNTQNPPLADIVLFGL

KAG7016972.1 hypothetical protein SDJN02_22083, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-0950Show/hide
Query:  ISQSTPFRDPAFLLTLVPFSNRYGTPNPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTICNTQNPPLADIVLFGL
        +SQSTP    + L ++      +  P   P  P+VL  TPP VHP  GS  SLAH  V  S+TICN+ +PPLADIVLFGL
Subjt:  ISQSTPFRDPAFLLTLVPFSNRYGTPNPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTICNTQNPPLADIVLFGL

KAG7021147.1 hypothetical protein SDJN02_17835, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-115100Show/hide
Query:  MKSSLSFVSVPLNLPLVDIVLSGLFLLSIPSNRCGISQSTPFRDPAFLLTLVPFSNRYGTPNPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTIC
        MKSSLSFVSVPLNLPLVDIVLSGLFLLSIPSNRCGISQSTPFRDPAFLLTLVPFSNRYGTPNPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTIC
Subjt:  MKSSLSFVSVPLNLPLVDIVLSGLFLLSIPSNRCGISQSTPFRDPAFLLTLVPFSNRYGTPNPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTIC

Query:  NTQNPPLADIVLFGLPSGFCNAYARKRILSSSVFFVSFGVTAKVSNNGESPSLSSSPSPSASLCLPFASKTVSFLVSSVATSPNPVFFFFFFFFFFFFYI
        NTQNPPLADIVLFGLPSGFCNAYARKRILSSSVFFVSFGVTAKVSNNGESPSLSSSPSPSASLCLPFASKTVSFLVSSVATSPNPVFFFFFFFFFFFFYI
Subjt:  NTQNPPLADIVLFGLPSGFCNAYARKRILSSSVFFVSFGVTAKVSNNGESPSLSSSPSPSASLCLPFASKTVSFLVSSVATSPNPVFFFFFFFFFFFFYI

Query:  CLDPHFYFHFQILQCSS
        CLDPHFYFHFQILQCSS
Subjt:  CLDPHFYFHFQILQCSS

KAG7030105.1 putative receptor-like protein kinase [Cucurbita argyrosperma subsp. argyrosperma]1.4e-0948.42Show/hide
Query:  RDPAFLLTLVPFSNRYGTP-------NPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTICNTQNPPLADIVLFGL-PSGFCNAYARKRIL
        + PA  L LVPFSNR GTP           L  + L+ TP R     G+ FSLAH  VSD +TICN+ +PPLADIVLFGL  SGF   +  + +L
Subjt:  RDPAFLLTLVPFSNRYGTP-------NPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTICNTQNPPLADIVLFGL-PSGFCNAYARKRIL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCATCACTTTCTTTTGTTTCGGTCCCGTTAAATCTACCGTTAGTCGATATTGTTTTATCTGGGCTTTTCCTTTTGAGCATCCCCTCAAATCGATGTGGGATCTC
ACAATCCACCCCATTTCGTGACCCAGCGTTTTTATTGACACTCGTTCCCTTCTCCAATCGATATGGGACCCCTAATCCACCCCCTTTGGACCCAAACGTCCTTATAGACA
CACCGCCTCGTGTCCACCCCCTTTGGGGCTCAGCCTTCTCCCTAGCACACCACCTCGTGTCTGACTCTAATACCATTTGTAACACCCAAAACCCACCACTAGCAGATATT
GTTCTCTTTGGACTTCCATCAGGATTTTGTAACGCATATGCTAGGAAGAGGATTTTGTCTTCTAGTGTCTTCTTTGTTTCATTTGGGGTTACTGCTAAAGTTTCCAACAA
TGGAGAAAGCCCTTCACTATCTTCTTCCCCTTCCCCTTCAGCTTCTCTTTGTCTTCCTTTTGCTTCGAAAACGGTGTCGTTCCTTGTCTCCTCTGTAGCTACCTCTCCTA
ACCCTGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACATTTGCTTGGATCCACATTTCTACTTCCACTTTCAGATTTTGCAGTGTTCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCATCACTTTCTTTTGTTTCGGTCCCGTTAAATCTACCGTTAGTCGATATTGTTTTATCTGGGCTTTTCCTTTTGAGCATCCCCTCAAATCGATGTGGGATCTC
ACAATCCACCCCATTTCGTGACCCAGCGTTTTTATTGACACTCGTTCCCTTCTCCAATCGATATGGGACCCCTAATCCACCCCCTTTGGACCCAAACGTCCTTATAGACA
CACCGCCTCGTGTCCACCCCCTTTGGGGCTCAGCCTTCTCCCTAGCACACCACCTCGTGTCTGACTCTAATACCATTTGTAACACCCAAAACCCACCACTAGCAGATATT
GTTCTCTTTGGACTTCCATCAGGATTTTGTAACGCATATGCTAGGAAGAGGATTTTGTCTTCTAGTGTCTTCTTTGTTTCATTTGGGGTTACTGCTAAAGTTTCCAACAA
TGGAGAAAGCCCTTCACTATCTTCTTCCCCTTCCCCTTCAGCTTCTCTTTGTCTTCCTTTTGCTTCGAAAACGGTGTCGTTCCTTGTCTCCTCTGTAGCTACCTCTCCTA
ACCCTGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACATTTGCTTGGATCCACATTTCTACTTCCACTTTCAGATTTTGCAGTGTTCTTCTTGA
Protein sequenceShow/hide protein sequence
MKSSLSFVSVPLNLPLVDIVLSGLFLLSIPSNRCGISQSTPFRDPAFLLTLVPFSNRYGTPNPPPLDPNVLIDTPPRVHPLWGSAFSLAHHLVSDSNTICNTQNPPLADI
VLFGLPSGFCNAYARKRILSSSVFFVSFGVTAKVSNNGESPSLSSSPSPSASLCLPFASKTVSFLVSSVATSPNPVFFFFFFFFFFFFYICLDPHFYFHFQILQCSS