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Carg17591 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17591
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPITH domain-containing protein At3g04780-like
Genome locationCarg_Chr12:10618327..10621384
RNA-Seq ExpressionCarg17591
SyntenyCarg17591
Gene Ontology termsNA
InterPro domainsIPR008979 - Galactose-binding-like domain superfamily
IPR010400 - PITH domain
IPR037047 - PITH domain superfamily
IPR045099 - PITH domain-containing protein 1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586303.1 PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.2e-39100Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGK
        MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGK
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGK

KAG7021152.1 PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-110100Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIFL
        MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIFL
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIFL

Query:  LDISISSGWRFIWESSQASFVMQECFEGGLWFGQWGLCCGGQGWVLDCSYGRDEREVLSLSPCLAGIVQPPARSWLVAREIWLRIARFCSALTY
        LDISISSGWRFIWESSQASFVMQECFEGGLWFGQWGLCCGGQGWVLDCSYGRDEREVLSLSPCLAGIVQPPARSWLVAREIWLRIARFCSALTY
Subjt:  LDISISSGWRFIWESSQASFVMQECFEGGLWFGQWGLCCGGQGWVLDCSYGRDEREVLSLSPCLAGIVQPPARSWLVAREIWLRIARFCSALTY

XP_022937687.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata]2.0e-3993.41Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF
        MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEG  ++  F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF

XP_022946891.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata]2.9e-3889.01Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF
        MAAASATAIHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQVIKLHSLVIKGPEEEG  ++  F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF

XP_022965977.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima]2.2e-3892.31Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF
        MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKG EEEG  ++  F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF

TrEMBL top hitse value%identityAlignment
A0A5D3D4D2 PITH domain-containing protein1.2e-3786.81Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF
        MAAASATAI+RNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQV+KLHSLVIKGPEEEG  ++  F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF

A0A6J1FBX4 PITH domain-containing protein At3g04780-like9.7e-4093.41Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF
        MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEG  ++  F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF

A0A6J1G4V6 PITH domain-containing protein At3g04780-like1.4e-3889.01Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF
        MAAASATAIHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQVIKLHSLVIKGPEEEG  ++  F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF

A0A6J1HLS0 PITH domain-containing protein At3g04780-like1.1e-3892.31Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF
        MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKG EEEG  ++  F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF

A0A6J1KJE4 PITH domain-containing protein At3g04780-like1.4e-3889.01Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF
        MAAASATAIHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQVIKLHSLVIKGPEEEG  ++  F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPF

SwissProt top hitse value%identityAlignment
O43396 Thioredoxin-like protein 12.0e-1040.91Show/hide
Query:  TAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEE-EGKYSITPFIS
        T I +  +DL  FIN +G ECLN++  H F N     C   D+  LESD DEQ+L+ + FNQ +KL+S+  +GP+  +G   +  FI+
Subjt:  TAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEE-EGKYSITPFIS

Q8CDN6 Thioredoxin-like protein 11.0e-0940.7Show/hide
Query:  IHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEE-EGKYSITPFIS
        I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQ+L+ + FNQ +KL+S+  +GP+  +G   +  FI+
Subjt:  IHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEE-EGKYSITPFIS

Q920J4 Thioredoxin-like protein 15.9e-1040.91Show/hide
Query:  TAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEE-EGKYSITPFIS
        T I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQ+L+ + FNQ +KL+S+  +GP+  +G   +  FI+
Subjt:  TAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEE-EGKYSITPFIS

Q9SQZ9 PITH domain-containing protein At3g047801.6e-2659.6Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIF
        M+A SA+ I + QVDL DFI+WSG+ECLNQ+ SH+  NAL Q  R+++ L LESDADEQ+L+YIPFNQVIKLHS  IKGPEEEG  ++  F +     F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIF

Q9USR1 Thioredoxin-like protein 16.1e-0736.17Show/hide
Query:  AASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVI---KGPEEEGKYSITPFIS
        A+S++A  +    L   I    +ECLNQ   H   +A +     N S  LESD DEQ+++YIPF +V+K+HS+ I   KG       +I  +I+
Subjt:  AASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVI---KGPEEEGKYSITPFIS

Arabidopsis top hitse value%identityAlignment
AT3G04780.1 Protein of unknown function (DUF1000)1.1e-2759.6Show/hide
Query:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIF
        M+A SA+ I + QVDL DFI+WSG+ECLNQ+ SH+  NAL Q  R+++ L LESDADEQ+L+YIPFNQVIKLHS  IKGPEEEG  ++  F +     F
Subjt:  MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTAC
AAATGCTCTTAGCCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATT
CCTTGGTCATCAAGGGACCTGAAGAGGAAGGCAAGTATTCTATTACACCTTTTATTAGTTCTAATTGGTTTATTTTTCTTCTGGATATTTCTATTTCAAGTGGGTGGCGC
TTTATTTGGGAGTCGTCGCAAGCTTCTTTTGTGATGCAGGAATGTTTTGAGGGTGGCTTGTGGTTTGGTCAGTGGGGATTATGCTGTGGGGGGCAAGGCTGGGTGCTGGA
TTGTAGTTACGGGCGAGATGAGCGTGAGGTTTTGTCATTAAGTCCTTGCCTTGCTGGTATTGTTCAACCGCCGGCGCGCAGTTGGTTAGTTGCTAGGGAGATCTGGCTAC
GAATTGCTCGCTTTTGTTCTGCATTGACATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTAC
AAATGCTCTTAGCCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATT
CCTTGGTCATCAAGGGACCTGAAGAGGAAGGCAAGTATTCTATTACACCTTTTATTAGTTCTAATTGGTTTATTTTTCTTCTGGATATTTCTATTTCAAGTGGGTGGCGC
TTTATTTGGGAGTCGTCGCAAGCTTCTTTTGTGATGCAGGAATGTTTTGAGGGTGGCTTGTGGTTTGGTCAGTGGGGATTATGCTGTGGGGGGCAAGGCTGGGTGCTGGA
TTGTAGTTACGGGCGAGATGAGCGTGAGGTTTTGTCATTAAGTCCTTGCCTTGCTGGTATTGTTCAACCGCCGGCGCGCAGTTGGTTAGTTGCTAGGGAGATCTGGCTAC
GAATTGCTCGCTTTTGTTCTGCATTGACATATTAG
Protein sequenceShow/hide protein sequence
MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIFLLDISISSGWR
FIWESSQASFVMQECFEGGLWFGQWGLCCGGQGWVLDCSYGRDEREVLSLSPCLAGIVQPPARSWLVAREIWLRIARFCSALTY