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Carg17596 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17596
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:10674966..10677609
RNA-Seq ExpressionCarg17596
SyntenyCarg17596
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021157.1 hypothetical protein SDJN02_17845, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-109100Show/hide
Query:  MSTPVLVRYINRYAIFSHCLSLLHLQVLKSSIEEVHNNRKRKSITATTKKLWHKVGGTHNIRFHCRFGNTLRRCIYFSPFAWTLQIRFCGGSKLATRCKD
        MSTPVLVRYINRYAIFSHCLSLLHLQVLKSSIEEVHNNRKRKSITATTKKLWHKVGGTHNIRFHCRFGNTLRRCIYFSPFAWTLQIRFCGGSKLATRCKD
Subjt:  MSTPVLVRYINRYAIFSHCLSLLHLQVLKSSIEEVHNNRKRKSITATTKKLWHKVGGTHNIRFHCRFGNTLRRCIYFSPFAWTLQIRFCGGSKLATRCKD

Query:  SNLSILFTDTAGSTREDDSCCPLSTCEMSPKPLLTPIWHEPSCNGTAPSANASEGLLSNEEMPTEVISDMAWNIGLPITKDTKALDKELYRIDT
        SNLSILFTDTAGSTREDDSCCPLSTCEMSPKPLLTPIWHEPSCNGTAPSANASEGLLSNEEMPTEVISDMAWNIGLPITKDTKALDKELYRIDT
Subjt:  SNLSILFTDTAGSTREDDSCCPLSTCEMSPKPLLTPIWHEPSCNGTAPSANASEGLLSNEEMPTEVISDMAWNIGLPITKDTKALDKELYRIDT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACACCGGTACTCGTTCGTTACATCAATCGATATGCAATATTTTCACATTGCCTGAGCCTTCTCCATTTACAAGTTTTGAAGTCATCGATCGAAGAAGTGCATAA
TAACAGGAAAAGGAAGTCAATCACAGCGACAACGAAGAAATTGTGGCATAAAGTTGGCGGGACTCATAACATCAGATTTCATTGTAGATTTGGCAACACATTGAGACGCT
GTATCTATTTCTCTCCATTTGCTTGGACTCTACAGATCCGCTTTTGTGGAGGCTCCAAGCTAGCCACTCGCTGCAAAGACTCTAATCTTTCGATCTTGTTCACGGACACG
GCTGGCAGTACCAGAGAGGACGACTCCTGCTGCCCACTGTCTACATGTGAAATGTCACCCAAGCCGTTGTTGACTCCTATATGGCATGAACCATCTTGCAATGGAACAGC
ACCATCTGCTAACGCATCGGAAGGGCTACTGTCCAACGAAGAGATGCCGACGGAGGTAATCTCAGACATGGCATGGAACATCGGGTTACCGATTACAAAAGACACTAAGG
CACTGGACAAAGAGTTATACAGAATAGACACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTACACCGGTACTCGTTCGTTACATCAATCGATATGCAATATTTTCACATTGCCTGAGCCTTCTCCATTTACAAGTTTTGAAGTCATCGATCGAAGAAGTGCATAA
TAACAGGAAAAGGAAGTCAATCACAGCGACAACGAAGAAATTGTGGCATAAAGTTGGCGGGACTCATAACATCAGATTTCATTGTAGATTTGGCAACACATTGAGACGCT
GTATCTATTTCTCTCCATTTGCTTGGACTCTACAGATCCGCTTTTGTGGAGGCTCCAAGCTAGCCACTCGCTGCAAAGACTCTAATCTTTCGATCTTGTTCACGGACACG
GCTGGCAGTACCAGAGAGGACGACTCCTGCTGCCCACTGTCTACATGTGAAATGTCACCCAAGCCGTTGTTGACTCCTATATGGCATGAACCATCTTGCAATGGAACAGC
ACCATCTGCTAACGCATCGGAAGGGCTACTGTCCAACGAAGAGATGCCGACGGAGGTAATCTCAGACATGGCATGGAACATCGGGTTACCGATTACAAAAGACACTAAGG
CACTGGACAAAGAGTTATACAGAATAGACACCTGA
Protein sequenceShow/hide protein sequence
MSTPVLVRYINRYAIFSHCLSLLHLQVLKSSIEEVHNNRKRKSITATTKKLWHKVGGTHNIRFHCRFGNTLRRCIYFSPFAWTLQIRFCGGSKLATRCKDSNLSILFTDT
AGSTREDDSCCPLSTCEMSPKPLLTPIWHEPSCNGTAPSANASEGLLSNEEMPTEVISDMAWNIGLPITKDTKALDKELYRIDT