; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17611 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17611
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type domain-containing protein
Genome locationCarg_Chr12:4988302..4990084
RNA-Seq ExpressionCarg17611
SyntenyCarg17611
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR027370 - RING-type zinc-finger, LisH dimerisation motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585843.1 hypothetical protein SDJN03_18576, partial [Cucurbita argyrosperma subsp. sororia]4.6e-129100Show/hide
Query:  MASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQL
        MASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQL
Subjt:  MASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQL

Query:  SLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIPG
        SLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIPG
Subjt:  SLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIPG

Query:  SALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        SALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
Subjt:  SALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

KAG7020759.1 hypothetical protein SDJN02_17447 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-134100Show/hide
Query:  MHVHPVSLKMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIF
        MHVHPVSLKMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIF
Subjt:  MHVHPVSLKMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIF

Query:  IFCPWCHQLSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFV
        IFCPWCHQLSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFV
Subjt:  IFCPWCHQLSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFV

Query:  VIVIFVIPGSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        VIVIFVIPGSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
Subjt:  VIVIFVIPGSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

XP_022951644.1 uncharacterized protein LOC111454398 [Cucurbita moschata]4.6e-12999.17Show/hide
Query:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
Subjt:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Query:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
        LSLR+VYKGNLKFP+KNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
Subjt:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP

Query:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
Subjt:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

XP_022973313.1 uncharacterized protein LOC111471872 [Cucurbita maxima]2.5e-12797.92Show/hide
Query:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
Subjt:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Query:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
        LSLR+VYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTS+TDAASARLPGIGRQRW+LFLHKHLDY VHLIFKFLLVVIFVVIVI VIP
Subjt:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP

Query:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
Subjt:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

XP_023537130.1 uncharacterized protein LOC111798304 [Cucurbita pepo subsp. pepo]6.0e-12999.17Show/hide
Query:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
Subjt:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Query:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
        LSLR+VYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETD ASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
Subjt:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP

Query:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
Subjt:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

TrEMBL top hitse value%identityAlignment
A0A1S3CPH8 uncharacterized protein LOC1035033291.4e-9679.17Show/hide
Query:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        K+ASNAIAGIRSKKNS V KQVFWECS DDEVCSE SRDEELECPICWESFNIVEN+PYVLWCGHSLCKNCVLGLQG VLK+A+ Q+R+PI I CPWCHQ
Subjt:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Query:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
        LSLR+VYKGNLKFPSKNF LLWMVESFN NEGKL+HSFN DNQ VFS  S T         +  +R RLF + HLD  +HL+FKFLL VIFV+IV+FVIP
Subjt:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP

Query:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        GSALILLLYLLITLLFALPSL IFYLALHAL+KLM+DITS
Subjt:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

A0A5A7TGX0 Zf-RING_LisH domain-containing protein1.4e-9679.17Show/hide
Query:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        K+ASNAIAGIRSKKNS V KQVFWECS DDEVCSE SRDEELECPICWESFNIVEN+PYVLWCGHSLCKNCVLGLQG VLK+A+ Q+R+PI I CPWCHQ
Subjt:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Query:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
        LSLR+VYKGNLKFPSKNF LLWMVESFN NEGKL+HSFN DNQ VFS  S T         +  +R RLF + HLD  +HL+FKFLL VIFV+IV+FVIP
Subjt:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP

Query:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        GSALILLLYLLITLLFALPSL IFYLALHAL+KLM+DITS
Subjt:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

A0A6J1D940 uncharacterized protein LOC1110185023.4e-9878.95Show/hide
Query:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        K+ASNAIAGIR +KNS VSKQVFWECS DDEVCSE SRDE LECPICWESFNIVENIPYVLWCGH+LCKNCVLGLQG VLKVA+ QIRVPI I CPWCHQ
Subjt:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Query:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASA-RLP------GIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVV
        LSLR+VYKGNLKFPSKNF LLWMVESFN +EGKL+HSFNGDNQPVF   S+T+  S+ RL       GIGR+R  LF++K+LD+ +HLI KFLLVVIF++
Subjt:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASA-RLP------GIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVV

Query:  IVIFVIPGSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        IV+FVIPGSA+ILLLYLLIT LFALPSL +FYLALHALE+LMSDITS
Subjt:  IVIFVIPGSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

A0A6J1GJD9 uncharacterized protein LOC1114543982.2e-12999.17Show/hide
Query:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
Subjt:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Query:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
        LSLR+VYKGNLKFP+KNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
Subjt:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP

Query:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
Subjt:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

A0A6J1IB19 uncharacterized protein LOC1114718721.2e-12797.92Show/hide
Query:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
Subjt:  KMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Query:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP
        LSLR+VYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTS+TDAASARLPGIGRQRW+LFLHKHLDY VHLIFKFLLVVIFVVIVI VIP
Subjt:  LSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIP

Query:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
Subjt:  GSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

SwissProt top hitse value%identityAlignment
Q6INB3 E3 ubiquitin-protein ligase RNF1828.1e-0430.11Show/hide
Query:  DDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILL
        +D   S     +ELEC IC+  +N+ +  P VL C H +C         C+ K+  C       I CP+C +   R+        P  N ILL
Subjt:  DDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILL

Q8K0W3 RING finger protein 2084.8e-0437.7Show/hide
Query:  EELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        E LECP C  ++N+ +  P VL C HS+C+ C+  L     K          FI CP CH+
Subjt:  EELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Q9H0X6 RING finger protein 2088.1e-0435.82Show/hide
Query:  SEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ
        S  +  E LECP C  S+N+ +  P VL C HS+C+ C+  L     K          FI CP C +
Subjt:  SEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQ

Arabidopsis top hitse value%identityAlignment
AT1G21651.1 zinc ion binding4.4e-0531.58Show/hide
Query:  EELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFN
        EE ECP+C +S++    +P VL CGH+ C+ C+  L            + P  I CP C  L ++   +G    P KN  LL +  S   ++ KLE   N
Subjt:  EELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFN

Query:  GDNQPVFSRTSETD
         +    F   S +D
Subjt:  GDNQPVFSRTSETD

AT1G69330.1 RING/U-box superfamily protein8.8e-5447.39Show/hide
Query:  ASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEE-LECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQL
        ASN I  +  KK+   S Q   +CSDD+   S  SRDEE LECPICWESFNIVEN+PYVLWCGH+LC+NCV GLQ  VL+++S  IR+P F+ CPWC  L
Subjt:  ASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEE-LECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQL

Query:  SLRIVYKGNLKFPSKNFILLWMVESFN---------------------------CNEGKLEHSFNGD--NQPVFSRTSETDAASARLPGIGRQRWRLFLH
        S RIVYKGNLKFP KNF LLWMVES N                           C+     HS N +   +P+  R   TD            R     H
Subjt:  SLRIVYKGNLKFPSKNFILLWMVESFN---------------------------CNEGKLEHSFNGD--NQPVFSRTSETDAASARLPGIGRQRWRLFLH

Query:  KHLDYAVHLIFKFLLVVIFVVIVIFVIPGSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS
        K LD+ +    KF  V+IF++IV F IPGS +IL LY L+T+LFA+P+  + Y A   LE+L+++ITS
Subjt:  KHLDYAVHLIFKFLLVVIFVVIVIFVIPGSALILLLYLLITLLFALPSLFIFYLALHALEKLMSDITS

AT1G74370.1 RING/U-box superfamily protein8.8e-3840.97Show/hide
Query:  SRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQ-GCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLE
        +++E+LECPICWESFN+VEN+PYVLWCGH++CK C+LGLQ   V+K ++   ++P F+ CPWC+ LSLR+V  G ++FPSKNF LLWMVES N +  +  
Subjt:  SRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQ-GCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILLWMVESFNCNEGKLE

Query:  HSFNGDNQPVFS----RTSETDAASARLPG----IGRQRW------------RLF--LHKHLDYAVHLIFKFLLVVIFVVIVIFVIPGSALILLLYLLIT
             DN+ V S      +  D  S    G    +  + W            RL   + K +    HL+ KF LVVIF+++ ++ IP SA +L +Y  +T
Subjt:  HSFNGDNQPVFS----RTSETDAASARLPG----IGRQRW------------RLF--LHKHLDYAVHLIFKFLLVVIFVVIVIFVIPGSALILLLYLLIT

Query:  LLFALPSLFIFYLALHALEKLMSDITS
           A+PS  + Y A  +L  L+ +I +
Subjt:  LLFALPSLFIFYLALHALEKLMSDITS

AT3G29270.1 RING/U-box superfamily protein6.5e-4946.72Show/hide
Query:  ECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILLWMV
        ECSDDD V S GS+DE LECPICWESFNIVEN+PYVLWCGH++CKNC+LGLQ  ++K+ +  +++P+FI CPWC+ LS R+V++G L+FP KN+ +LWMV
Subjt:  ECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILLWMV

Query:  ESFN----------CNEGKLEHSFNGDNQPVFSRTSETDAASARLPG---IGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIPGSALILLLYLL
        E  N            +G  +H+    +  + +R   +    +R      I R   +  L K L + V L  KF LVVIF++I+++ IP SA IL +Y+L
Subjt:  ESFN----------CNEGKLEHSFNGDNQPVFSRTSETDAASARLPG---IGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIPGSALILLLYLL

Query:  ITLLFALPSLFIFYLALHALEKLMSDITS
        +TLL ALPS  I Y A   L+ L+ +I +
Subjt:  ITLLFALPSLFIFYLALHALEKLMSDITS

AT3G29270.2 RING/U-box superfamily protein6.5e-4946.72Show/hide
Query:  ECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILLWMV
        ECSDDD V S GS+DE LECPICWESFNIVEN+PYVLWCGH++CKNC+LGLQ  ++K+ +  +++P+FI CPWC+ LS R+V++G L+FP KN+ +LWMV
Subjt:  ECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQLSLRIVYKGNLKFPSKNFILLWMV

Query:  ESFN----------CNEGKLEHSFNGDNQPVFSRTSETDAASARLPG---IGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIPGSALILLLYLL
        E  N            +G  +H+    +  + +R   +    +R      I R   +  L K L + V L  KF LVVIF++I+++ IP SA IL +Y+L
Subjt:  ESFN----------CNEGKLEHSFNGDNQPVFSRTSETDAASARLPG---IGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIPGSALILLLYLL

Query:  ITLLFALPSLFIFYLALHALEKLMSDITS
        +TLL ALPS  I Y A   L+ L+ +I +
Subjt:  ITLLFALPSLFIFYLALHALEKLMSDITS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGTTCATCCAGTTTCTCTAAAGATGGCCTCGAATGCCATTGCTGGCATTCGATCCAAGAAAAACTCAGCTGTTTCGAAGCAAGTTTTCTGGGAGTGCTCGGATGA
CGACGAGGTATGCTCAGAAGGTAGTAGAGATGAAGAACTGGAATGCCCGATATGCTGGGAATCCTTTAACATTGTGGAGAACATACCTTATGTCTTATGGTGTGGTCATT
CACTCTGCAAAAACTGTGTATTAGGCCTTCAAGGGTGTGTGTTGAAAGTAGCATCGTGTCAAATCCGAGTCCCGATCTTCATCTTTTGTCCTTGGTGCCATCAGCTGTCG
CTAAGGATCGTGTACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTCATTCTTCTTTGGATGGTTGAGAGCTTCAATTGTAATGAGGGAAAACTCGAACATTCCTTCAA
TGGGGATAATCAACCAGTTTTTTCTCGGACTTCCGAAACCGATGCAGCATCTGCGAGGCTACCTGGAATAGGGAGGCAGCGATGGCGGTTGTTTCTCCATAAACACTTGG
ATTACGCCGTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTGTTGTGATTGTCATTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTATACCTGCTAATC
ACTCTACTGTTTGCATTGCCATCTTTGTTCATATTTTACCTTGCACTCCATGCTCTGGAAAAGCTTATGAGTGATATAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATCCGCTCTCCTCCAAAACGCAATCGGCTTCCTCGACTTTGGTCCGGCGGAGGGAAAATGAAGAGGGCAGATCGCGACCTTCCTCCCAAATCCTTTTCTTGATCCTCTTT
TGTTTTTCTCAATCCTTCTCAATGCATGTTCATCCAGTTTCTCTAAAGATGGCCTCGAATGCCATTGCTGGCATTCGATCCAAGAAAAACTCAGCTGTTTCGAAGCAAGT
TTTCTGGGAGTGCTCGGATGACGACGAGGTATGCTCAGAAGGTAGTAGAGATGAAGAACTGGAATGCCCGATATGCTGGGAATCCTTTAACATTGTGGAGAACATACCTT
ATGTCTTATGGTGTGGTCATTCACTCTGCAAAAACTGTGTATTAGGCCTTCAAGGGTGTGTGTTGAAAGTAGCATCGTGTCAAATCCGAGTCCCGATCTTCATCTTTTGT
CCTTGGTGCCATCAGCTGTCGCTAAGGATCGTGTACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTCATTCTTCTTTGGATGGTTGAGAGCTTCAATTGTAATGAGGG
AAAACTCGAACATTCCTTCAATGGGGATAATCAACCAGTTTTTTCTCGGACTTCCGAAACCGATGCAGCATCTGCGAGGCTACCTGGAATAGGGAGGCAGCGATGGCGGT
TGTTTCTCCATAAACACTTGGATTACGCCGTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTGTTGTGATTGTCATTTTTGTAATCCCTGGAAGTGCACTCATC
TTGCTGCTATACCTGCTAATCACTCTACTGTTTGCATTGCCATCTTTGTTCATATTTTACCTTGCACTCCATGCTCTGGAAAAGCTTATGAGTGATATAACTTCATGA
Protein sequenceShow/hide protein sequence
MHVHPVSLKMASNAIAGIRSKKNSAVSKQVFWECSDDDEVCSEGSRDEELECPICWESFNIVENIPYVLWCGHSLCKNCVLGLQGCVLKVASCQIRVPIFIFCPWCHQLS
LRIVYKGNLKFPSKNFILLWMVESFNCNEGKLEHSFNGDNQPVFSRTSETDAASARLPGIGRQRWRLFLHKHLDYAVHLIFKFLLVVIFVVIVIFVIPGSALILLLYLLI
TLLFALPSLFIFYLALHALEKLMSDITS