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Carg17615 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17615
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:4756564..4757924
RNA-Seq ExpressionCarg17615
SyntenyCarg17615
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020751.1 hypothetical protein SDJN02_17439, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-75100Show/hide
Query:  MVTNILSEILYLPRDSRFFRFSDISFDMLYRRGEDVKSGSWSSSEKISIAGVYDGIRLLAVREYLNAHENPDKLVVLNLFSNFCLGIQIPALLNPGPGLV
        MVTNILSEILYLPRDSRFFRFSDISFDMLYRRGEDVKSGSWSSSEKISIAGVYDGIRLLAVREYLNAHENPDKLVVLNLFSNFCLGIQIPALLNPGPGLV
Subjt:  MVTNILSEILYLPRDSRFFRFSDISFDMLYRRGEDVKSGSWSSSEKISIAGVYDGIRLLAVREYLNAHENPDKLVVLNLFSNFCLGIQIPALLNPGPGLV

Query:  QMVSILESYRVQVAEAGAMRRVRNVELKDPVQTVPCVMERYMLYQTN
        QMVSILESYRVQVAEAGAMRRVRNVELKDPVQTVPCVMERYMLYQTN
Subjt:  QMVSILESYRVQVAEAGAMRRVRNVELKDPVQTVPCVMERYMLYQTN
XP_038889907.1 uncharacterized protein LOC120079678 isoform X1 [Benincasa hispida]6.0e-1280.77Show/hide
Query:  QIPALLNPGPGLVQMVSILESYRVQVAEAGAMRRVRNVELKDPVQTVPCVME
        Q+ A LNPGPGL QMVSI +SY VQVAEAG MRRVRNVELKDP  TVPCVME
Subjt:  QIPALLNPGPGLVQMVSILESYRVQVAEAGAMRRVRNVELKDPVQTVPCVME
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACGAACATACTATCCGAAATTCTGTATTTGCCTCGAGACTCCCGGTTCTTCCGTTTTTCGGATATATCTTTCGACATGTTATACAGGCGCGGTGAAGATGTTAA
ATCCGGCAGCTGGTCGTCTTCCGAGAAAATCAGCATAGCTGGAGTGTACGATGGGATACGCCTCTTGGCCGTCCGAGAATATCTAAACGCACACGAGAATCCTGATAAAC
TCGTAGTACTTAATCTTTTTTCGAACTTCTGTCTGGGAATTCAAATTCCAGCGCTCCTGAACCCAGGTCCTGGTTTGGTCCAAATGGTCAGTATATTAGAGAGCTACCGT
GTCCAAGTTGCCGAGGCAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCAGACTGTTCCGTGTGTAATGGAAAGGTATATGCTCTATCAGACCAA
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTACGAACATACTATCCGAAATTCTGTATTTGCCTCGAGACTCCCGGTTCTTCCGTTTTTCGGATATATCTTTCGACATGTTATACAGGCGCGGTGAAGATGTTAA
ATCCGGCAGCTGGTCGTCTTCCGAGAAAATCAGCATAGCTGGAGTGTACGATGGGATACGCCTCTTGGCCGTCCGAGAATATCTAAACGCACACGAGAATCCTGATAAAC
TCGTAGTACTTAATCTTTTTTCGAACTTCTGTCTGGGAATTCAAATTCCAGCGCTCCTGAACCCAGGTCCTGGTTTGGTCCAAATGGTCAGTATATTAGAGAGCTACCGT
GTCCAAGTTGCCGAGGCAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCAGACTGTTCCGTGTGTAATGGAAAGGTATATGCTCTATCAGACCAA
TTGA
Protein sequenceShow/hide protein sequence
MVTNILSEILYLPRDSRFFRFSDISFDMLYRRGEDVKSGSWSSSEKISIAGVYDGIRLLAVREYLNAHENPDKLVVLNLFSNFCLGIQIPALLNPGPGLVQMVSILESYR
VQVAEAGAMRRVRNVELKDPVQTVPCVMERYMLYQTN