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Carg17619 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17619
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHir1
Genome locationCarg_Chr12:4727023..4730624
RNA-Seq ExpressionCarg17619
SyntenyCarg17619
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2633679.1 unnamed protein product [Spirodela intermedia]1.5e-0969.23Show/hide
Query:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        M T  D ++APISF+VSKYWVT+TMS+TSL VVPGT + N  TLSLSPST+A
Subjt:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

CAA7409982.1 unnamed protein product [Spirodela intermedia]1.5e-0969.23Show/hide
Query:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        M T  D ++APISF+VSKYWVT+TMS+TSL VVPGT + N  TLSLSPST+A
Subjt:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

KAG7020747.1 hypothetical protein SDJN02_17435, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-24100Show/hide
Query:  MGLVVGPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        MGLVVGPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
Subjt:  MGLVVGPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

KAG9145694.1 hypothetical protein Leryth_022109 [Lithospermum erythrorhizon]1.8e-1071.43Show/hide
Query:  GPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        GPCG  T  DFDDAPISFIVSKY VTR MS+TS   VP TFS  ASTLS +PST+A
Subjt:  GPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

RYR16347.1 hypothetical protein Ahy_B04g073346 isoform E [Arachis hypogaea]1.2e-1482.14Show/hide
Query:  GPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        GPCGM T  DF++APISFIVSKY VTRTMSM S  VVPGTFS NASTLSLSPSTMA
Subjt:  GPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

TrEMBL top hitse value%identityAlignment
A0A0A9JBQ4 Hir11.0e-1176.92Show/hide
Query:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        MKTE D D+APISF+VSKYWVTRT+S+TSL  VPGTFS  A TLSLSPST+A
Subjt:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

A0A444ZQA2 Uncharacterized protein5.8e-1582.14Show/hide
Query:  GPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        GPCGM T  DF++APISFIVSKY VTRTMSM S  VVPGTFS NASTLSLSPSTMA
Subjt:  GPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

A0A7I8JSM4 Hypothetical protein7.4e-1069.23Show/hide
Query:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        M T  D ++APISF+VSKYWVT+TMS+TSL VVPGT + N  TLSLSPST+A
Subjt:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

A0A7I8LFP1 Hypothetical protein1.6e-0969.23Show/hide
Query:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        MKT  D ++APISF+VSKYWVTRTMS+TSL VVPGT +    TLSL PST+A
Subjt:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

A0A7I8LJE5 Hypothetical protein7.4e-1069.23Show/hide
Query:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA
        M T  D ++APISF+VSKYWVT+TMS+TSL VVPGT + N  TLSLSPST+A
Subjt:  MKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGGTGGTTGGTCCGTGTGGGATGAAAACCGAATTAGACTTCGACGATGCTCCGATTTCCTTCATCGTGTCGAAGTATTGGGTCACCAGAACCATGTCCATGAC
ATCCTTAGATGTCGTTCCGGGGACGTTTTCGGCAAATGCTAGCACGCTGTCTCTGAGCCCATCGACAATGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGGTGGTTGGTCCGTGTGGGATGAAAACCGAATTAGACTTCGACGATGCTCCGATTTCCTTCATCGTGTCGAAGTATTGGGTCACCAGAACCATGTCCATGAC
ATCCTTAGATGTCGTTCCGGGGACGTTTTCGGCAAATGCTAGCACGCTGTCTCTGAGCCCATCGACAATGGCTTGA
Protein sequenceShow/hide protein sequence
MGLVVGPCGMKTELDFDDAPISFIVSKYWVTRTMSMTSLDVVPGTFSANASTLSLSPSTMA