; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17622 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17622
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:4712842..4713738
RNA-Seq ExpressionCarg17622
SyntenyCarg17622
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585812.1 hypothetical protein SDJN03_18545, partial [Cucurbita argyrosperma subsp. sororia]3.6e-6286.01Show/hide
Query:  SKNQQFLLGLYLFLSSLLVIS---VSRFAAGVTEGAWLWLGEWPTKDDKILASKQNNYGSCGSSFRLRLTHAPQLANPIPLNTTSFSSSTHFSLALTDIP
        ++N++  L   L+ S + +     VSRFAAGVTEGAWLWLGEWPTKDDKILASKQNNYGSCGSSFRLRLTHAPQLANPIPLNTTSFSSSTHFSLALTDIP
Subjt:  SKNQQFLLGLYLFLSSLLVIS---VSRFAAGVTEGAWLWLGEWPTKDDKILASKQNNYGSCGSSFRLRLTHAPQLANPIPLNTTSFSSSTHFSLALTDIP

Query:  PLYSDLFGFSNFPPAPSFPPAIHGTRRRLAPVISLNPPKLVHR
        PLYSDLFGFSNFPPAPSFPPAIHGTRRRLAPVISLNPPKLVHR
Subjt:  PLYSDLFGFSNFPPAPSFPPAIHGTRRRLAPVISLNPPKLVHR
KAG7020744.1 hypothetical protein SDJN02_17432, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-74100Show/hide
Query:  MSKNQQFLLGLYLFLSSLLVISVSRFAAGVTEGAWLWLGEWPTKDDKILASKQNNYGSCGSSFRLRLTHAPQLANPIPLNTTSFSSSTHFSLALTDIPPL
        MSKNQQFLLGLYLFLSSLLVISVSRFAAGVTEGAWLWLGEWPTKDDKILASKQNNYGSCGSSFRLRLTHAPQLANPIPLNTTSFSSSTHFSLALTDIPPL
Subjt:  MSKNQQFLLGLYLFLSSLLVISVSRFAAGVTEGAWLWLGEWPTKDDKILASKQNNYGSCGSSFRLRLTHAPQLANPIPLNTTSFSSSTHFSLALTDIPPL

Query:  YSDLFGFSNFPPAPSFPPAIHGTRRRLAPVISLNPPKLVHR
        YSDLFGFSNFPPAPSFPPAIHGTRRRLAPVISLNPPKLVHR
Subjt:  YSDLFGFSNFPPAPSFPPAIHGTRRRLAPVISLNPPKLVHR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAAAAATCAGCAATTTCTACTCGGCCTTTATCTTTTCTTAAGTTCACTTTTGGTTATCTCGGTTTCAAGATTTGCGGCTGGAGTCACGGAGGGAGCGTGGCTGTG
GCTCGGCGAATGGCCCACCAAGGATGACAAAATTCTCGCTTCCAAACAAAACAATTATGGGAGCTGCGGGAGCAGCTTCAGACTCCGGCTCACGCATGCGCCCCAGTTGG
CTAACCCAATTCCTCTCAATACGACGTCGTTCTCCTCTTCTACCCATTTCTCCCTCGCTTTGACCGACATTCCTCCTCTATATTCGGATCTCTTTGGCTTCTCCAATTTC
CCTCCCGCTCCTTCATTCCCTCCGGCCATCCACGGAACGCGGCGGCGGCTTGCACCAGTGATCTCACTTAATCCTCCAAAACTTGTTCATCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAAAAATCAGCAATTTCTACTCGGCCTTTATCTTTTCTTAAGTTCACTTTTGGTTATCTCGGTTTCAAGATTTGCGGCTGGAGTCACGGAGGGAGCGTGGCTGTG
GCTCGGCGAATGGCCCACCAAGGATGACAAAATTCTCGCTTCCAAACAAAACAATTATGGGAGCTGCGGGAGCAGCTTCAGACTCCGGCTCACGCATGCGCCCCAGTTGG
CTAACCCAATTCCTCTCAATACGACGTCGTTCTCCTCTTCTACCCATTTCTCCCTCGCTTTGACCGACATTCCTCCTCTATATTCGGATCTCTTTGGCTTCTCCAATTTC
CCTCCCGCTCCTTCATTCCCTCCGGCCATCCACGGAACGCGGCGGCGGCTTGCACCAGTGATCTCACTTAATCCTCCAAAACTTGTTCATCGGTGA
Protein sequenceShow/hide protein sequence
MSKNQQFLLGLYLFLSSLLVISVSRFAAGVTEGAWLWLGEWPTKDDKILASKQNNYGSCGSSFRLRLTHAPQLANPIPLNTTSFSSSTHFSLALTDIPPLYSDLFGFSNF
PPAPSFPPAIHGTRRRLAPVISLNPPKLVHR