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Carg17652 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17652
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionWD repeat-containing protein DWA2
Genome locationCarg_Chr12:4394803..4396563
RNA-Seq ExpressionCarg17652
SyntenyCarg17652
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
InterPro domainsIPR040323 - EARP and GARP complex-interacting protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585778.1 WD repeat-containing protein DWA2, partial [Cucurbita argyrosperma subsp. sororia]3.2e-6897.1Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS---TGRDNEKEEAL
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS   TGRDNEKEEAL
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS---TGRDNEKEEAL

Query:  DVEDLETWLEVSGKGKDEESGKCKDEDSERTKGNHLKG
        DVEDLETWLEVSGKGKDEESGKCKDEDS RTKGNHLKG
Subjt:  DVEDLETWLEVSGKGKDEESGKCKDEDSERTKGNHLKG

KAG7020715.1 WD repeat-containing protein DWA2 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-70100Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKEEALDVE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKEEALDVE
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKEEALDVE

Query:  DLETWLEVSGKGKDEESGKCKDEDSERTKGNHLKG
        DLETWLEVSGKGKDEESGKCKDEDSERTKGNHLKG
Subjt:  DLETWLEVSGKGKDEESGKCKDEDSERTKGNHLKG

XP_004144228.1 WD repeat-containing protein DWA2 [Cucumis sativus]1.0e-4296.67Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPF+QRIFSTVFSTG +
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD

XP_022153181.1 WD repeat-containing protein DWA2 [Momordica charantia]2.1e-4396.74Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG + E
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

XP_022951371.1 WD repeat-containing protein DWA2-like [Cucurbita moschata]6.1e-4392.55Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG  ++++
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKE

TrEMBL top hitse value%identityAlignment
A0A0A0KDH1 WD_REPEATS_REGION domain-containing protein5.0e-4396.67Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPF+QRIFSTVFSTG +
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD

A0A1S3CMG4 WD repeat-containing protein DWA2-like isoform X16.5e-4396.67Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS G +
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD

A0A5A7TA39 WD repeat-containing protein DWA2-like isoform X16.5e-4396.67Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS G +
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD

A0A6J1DJW1 WD repeat-containing protein DWA21.0e-4396.74Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG + E
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

A0A6J1GHE6 WD repeat-containing protein DWA2-like2.9e-4392.55Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG  ++++
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKE

SwissProt top hitse value%identityAlignment
Q3KPT3 EARP-interacting protein homolog6.0e-0931.33Show/hide
Query:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        YGL++QAR +    A+TD   F+ GT SL+ +N++H+I      + +    L  H  EIW + + P D+ + +T ++   D++
Subjt:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

Q53HC9 EARP and GARP complex-interacting protein 11.3e-0831.33Show/hide
Query:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        YGL++QAR +    A+TD   F+ GT SLK +N++H+I      + +    L     EIW +++ P D+ + +T ++   D++
Subjt:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

Q5M8I4 EARP-interacting protein homolog2.0e-0932.53Show/hide
Query:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        YGL++QAR +A   A+TD   F+ GT SL+ +N++H+I      + +    L  H  EIW +++ P D+ + +T ++   D++
Subjt:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

Q6NPN9 WD repeat-containing protein DWA24.1e-4290.91Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG
        MQGGSSGIGYGLKYQARCI+DVKAD DHTSF+TGTLSLK+ENEVHL+RLSS GSEL+CEGLFSHPNEIWDLAS PFDQRIFSTVFSTG
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG

Q86A97 EARP-interacting protein homolog2.2e-1137.18Show/hide
Query:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFST
        YGL  + R ++ + A+ D   F+ GT +L++ENE+ L+  +  G  + C  +F HP EI  + SCPFD  +F +V++T
Subjt:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFST

Arabidopsis top hitse value%identityAlignment
AT1G20540.1 Transducin/WD40 repeat-like superfamily protein2.6e-4492.05Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG
        MQGGSSGIGYGLKYQ+RCI+DVKADTD+TSF+TGTLSLK+ENEVHL+RLSS GSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG

AT1G76260.1 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 22.9e-4390.91Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG
        MQGGSSGIGYGLKYQARCI+DVKAD DHTSF+TGTLSLK+ENEVHL+RLSS GSEL+CEGLFSHPNEIWDLAS PFDQRIFSTVFSTG
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGTGGATCATCAGGCATTGGCTACGGGCTGAAATACCAGGCTCGATGCATCGCTGATGTCAAAGCAGATACAGATCACACCAGCTTCATCACCGGTACTCTCAG
TCTCAAAGACGAAAATGAGGTGCATTTGATTCGTCTCTCGTCGAGTGGATCCGAGCTCATATGCGAGGGTTTGTTTTCTCACCCCAATGAGATCTGGGACCTCGCATCTT
GCCCCTTCGACCAACGCATTTTCTCTACCGTCTTCTCCACTGGTAGAGACAATGAGAAAGAAGAAGCATTAGATGTAGAAGATTTAGAGACATGGTTGGAAGTCTCGGGT
AAAGGTAAGGATGAAGAATCGGGTAAATGCAAAGATGAAGATTCAGAAAGGACAAAAGGGAATCACTTGAAGGGCTAG
mRNA sequenceShow/hide mRNA sequence
TTTGATCATCGTTGAGTGTTTCATTATCCGCCATGCAAGGTGGATCATCAGGCATTGGCTACGGGCTGAAATACCAGGCTCGATGCATCGCTGATGTCAAAGCAGATACA
GATCACACCAGCTTCATCACCGGTACTCTCAGTCTCAAAGACGAAAATGAGGTGCATTTGATTCGTCTCTCGTCGAGTGGATCCGAGCTCATATGCGAGGGTTTGTTTTC
TCACCCCAATGAGATCTGGGACCTCGCATCTTGCCCCTTCGACCAACGCATTTTCTCTACCGTCTTCTCCACTGGTAGAGACAATGAGAAAGAAGAAGCATTAGATGTAG
AAGATTTAGAGACATGGTTGGAAGTCTCGGGTAAAGGTAAGGATGAAGAATCGGGTAAATGCAAAGATGAAGATTCAGAAAGGACAAAAGGGAATCACTTGAAGGGCTAG
Protein sequenceShow/hide protein sequence
MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEVHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKEEALDVEDLETWLEVSG
KGKDEESGKCKDEDSERTKGNHLKG